Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rab11a

Gene Name Gene ID Reads Annotation
rab11a ENSDARG00000041450, ENSDARG00000109465 7418 RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]










Genes with expression patterns similar to rab11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
2. fam3c ENSDARG00000056152 3833 2.739 0.846 - - - - 0.976 0.917 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
3. kpna2 ENSDARG00000038066 7954 2.685 0.921 0.973 - - - - - - 0.791 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
4. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 2.63 0.948 - 0.913 - - - - - 0.769 LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
5. col16a1 ENSDARG00000009194 5600 2.611 - - 0.907 - 0.925 - 0.779 - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
6. phf12a ENSDARG00000074303 1025 2.585 0.943 - 0.891 - - - - - 0.751 PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
7. calub ENSDARG00000005115 1478 2.567 0.943 - - - - - 0.912 - 0.712 calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
8. ppp1cab ENSDARG00000071566 4350 2.555 0.909 - - - 0.928 - - - 0.718 protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
9. MAP4K4 ENSDARG00000098670 4665 2.546 - 0.977 - - - - 0.850 - 0.719 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
10. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.434 - 0.956 0.763 - - - - - 0.715 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
11. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 1.944 - 0.972 - - - 0.972 - - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
12. sart3 ENSDARG00000008032 2594 1.943 - 0.976 - - - 0.967 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
13. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.933 - 0.970 - - - - 0.963 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
14. klf6a ENSDARG00000029072 3758 1.918 - 0.984 - - - - 0.934 - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
15. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.914 - 0.980 - - 0.934 - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
16. tex2 ENSDARG00000078186 2467 1.902 - 0.979 - - - - 0.923 - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
17. rhoad rhoad 8007 1.902 0.943 0.959 - - - - - - -
18. ptpn13 ENSDARG00000103699 2866 1.9 - 0.981 0.919 - - - - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
19. hoxa10b ENSDARG00000031337 3992 1.896 - 0.971 - - - - 0.925 - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
20. ctdspla ENSDARG00000071673 1447 1.895 - - - - 0.924 0.971 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
21. LRP10 ENSDARG00000054539 1895 1.894 - - - - - 0.972 0.922 - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
22. nudt3a ENSDARG00000016256 2713 1.894 - - - - 0.927 0.967 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
23. ddx3 ddx3 4076 1.893 - 0.986 - - - - 0.907 - -
24. trpc4apa ENSDARG00000018840 2543 1.892 - 0.977 - - 0.915 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
25. nhsl1b ENSDARG00000042627 3697 1.891 - - - - - 0.967 0.924 - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
26. pank1b ENSDARG00000010098 3202 1.89 - - 0.902 - - 0.988 - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
27. alpi.1 ENSDARG00000015273 1712 1.884 - - - - - 0.974 0.910 - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
28. slc1a5 ENSDARG00000099186 7580 1.884 - - 0.910 - - 0.974 - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
29. lsm4 ENSDARG00000023852 6083 1.878 - - - - 0.927 - 0.951 - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
30. cdca7a ENSDARG00000077620 9345 1.874 - 0.925 - - - - 0.949 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
31. sgcb ENSDARG00000052341 4168 1.873 0.923 - - - - 0.950 - - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
32. RNF214 RNF214 816 1.872 0.945 - - - 0.927 - - - -
33. rcn1 ENSDARG00000070006 8455 1.866 - 0.938 - - - - 0.928 - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
34. mybpc3 ENSDARG00000011615 7271 1.865 0.907 - - - - 0.958 - - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
35. pdcd10b ENSDARG00000012591 3395 1.864 - 0.944 - - - - 0.920 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
36. fam50a ENSDARG00000024895 3020 1.864 - - 0.898 - - 0.966 - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
37. rnf168 ENSDARG00000112483 594 1.862 0.943 - - - - - 0.919 - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
38. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.861 0.954 - - - - - 0.907 - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
39. sec24d ENSDARG00000045946 2395 1.86 - 0.976 0.884 - - - - - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
40. CPT1A CPT1A 4004 1.858 0.931 0.927 - - - - - - -
41. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.85 - 0.948 0.902 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
42. sdha ENSDARG00000016721 8255 1.847 - - - - 0.887 0.960 - - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
43. snx1a ENSDARG00000071031 3975 1.843 0.929 - - - 0.914 - - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
44. c5 ENSDARG00000021004 3536 1.837 - - - - - 0.931 0.906 - - complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
45. id2a ENSDARG00000055283 7428 1.836 - - 0.894 - - - 0.942 - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
46. bves ENSDARG00000058548 2291 1.833 - 0.965 - - - - 0.868 - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
47. selt1b 1396 1.832 0.948 - 0.884 - - - - - - selenoprotein T, 1b
48. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.83 - 0.939 - - 0.891 - - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
49. pdia5 ENSDARG00000069242 3576 1.829 - 0.983 0.846 - - - - - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
50. sema3fa ENSDARG00000011163 759 1.826 - - 0.890 - 0.936 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
51. dhrs13b ENSDARG00000031814, ENSDARG00000097019, ENSDARG00000111081 1792 1.825 0.847 0.978 - - - - - - - dehydrogenase/reductase (SDR family) member 13b [Source:ZFIN;Acc:ZDB-GENE-040801-253]
52. cltcb ENSDARG00000090716 5544 1.823 0.898 - - - 0.925 - - - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
53. cdkn1c cdkn1c 17427 1.821 - 0.909 - - - 0.912 - - -
54. ube2v1 ENSDARG00000041875 5739 1.815 0.933 - 0.882 - - - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
55. slc7a8a ENSDARG00000075831 2987 1.811 - - 0.872 - - 0.939 - - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
56. fkbp8 ENSDARG00000001734 1709 1.807 - - 0.882 - - - 0.925 - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
57. pacsin3 ENSDARG00000099339 4668 1.804 - - - - - 0.966 0.838 - - protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]
58. gapdhs ENSDARG00000039914 8760 1.803 - - - - - 0.896 0.907 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
59. CORO1C CORO1C 5554 1.799 - - 0.879 - - - 0.920 - -
60. tomm7 ENSDARG00000067717 4452 1.798 - - - - 0.902 - 0.896 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
61. hoxb3a ENSDARG00000029263 5493 1.79 0.927 - 0.863 - - - - - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
62. ass1 8099 1.78 0.801 0.979 - - - - - - - argininosuccinate synthase 1
63. hnrnpul1 ENSDARG00000040564 6550 1.779 - - - - - 0.981 - - 0.798 heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
64. gfer ENSDARG00000070061 1119 1.774 - 0.976 0.798 - - - - - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
65. BX511252.1 BX511252.1 59309 1.763 0.899 - - - 0.864 - - - -
66. wu:fk48d07 wu:fk48d07 13245 1.763 - 0.863 - - - - 0.900 - -
67. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.761 - 0.859 0.902 - - - - - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
68. tufm ENSDARG00000104173 9292 1.76 - - 0.810 - - 0.950 - - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
69. WDR1 ENSDARG00000114022 7532 1.759 0.867 - - - - - 0.892 - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
70. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.757 0.923 - 0.834 - - - - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
71. glrx ENSDARG00000028106 16225 1.757 0.825 0.932 - - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
72. aqp3a ENSDARG00000003808 9044 1.753 - - 0.885 - - 0.868 - - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
73. ccnd1 ENSDARG00000101637 34762 1.749 - - - - - 0.902 0.847 - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
74. CABZ01059390.1 CABZ01059390.1 4340 1.747 - - - - 0.883 - 0.864 - -
75. gars ENSDARG00000059070 17015 1.744 0.866 0.878 - - - - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
76. gmps ENSDARG00000079848 8217 1.739 - 0.831 - - 0.908 - - - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
77. pkp3 pkp3 9767 1.738 - 0.875 - - - - 0.863 - -
78. denr ENSDARG00000037229 8370 1.738 0.848 - - - 0.890 - - - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
79. fbrsl1 ENSDARG00000058232 885 1.736 - - - - - - 0.917 0.819 - fibrosin-like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-487]
80. vps25 ENSDARG00000059079 3747 1.735 - 0.814 - - 0.921 - - - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
81. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.732 0.959 - - - - - - - 0.773 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
82. smyd1b ENSDARG00000091253 4964 1.728 - - - - 0.885 - 0.843 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
83. mcm2 ENSDARG00000102798 8148 1.719 - - - - - 0.976 - - 0.743 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
84. SRGAP3 ENSDARG00000060309 5353 1.717 - 0.973 - - - - 0.744 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
85. IDH2 ENSDARG00000003795 18659 1.708 - - - - 0.869 0.839 - - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
86. COL2A1 COL2A1 18161 1.707 - - 0.806 - - 0.901 - - -
87. stxbp1a ENSDARG00000001994 5154 1.705 0.795 - - - 0.910 - - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
88. skp1 ENSDARG00000003151 8172 1.703 - - - - - - 0.945 - 0.758 S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
89. cnot3a ENSDARG00000007135 3084 1.7 - - 0.783 - - - 0.917 - - CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
90. cdv3 ENSDARG00000023028 12380 1.7 - 0.954 - - - 0.746 - - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
91. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.698 - 0.974 - - - - - - 0.724 eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
92. taf9 ENSDARG00000077870 6992 1.695 - 0.946 - - - - - - 0.749 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
93. zgc:194839 ENSDARG00000078550 4003 1.694 - 0.823 - - - - 0.871 - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
94. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.689 - 0.956 - - - - - - 0.733 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
95. arl8a ENSDARG00000078686 4379 1.686 0.911 - - - - - - - 0.775 ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
96. taldo1 ENSDARG00000103369 3804 1.684 - - 0.842 - - - 0.842 - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
97. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 1.68 - - - - - - 0.948 - 0.732 si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
98. sparc ENSDARG00000019353 38281 1.676 0.957 - - - - 0.719 - - - secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
99. cad ENSDARG00000041895 4977 1.675 - - - - 0.748 - 0.927 - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
100. npc1 ENSDARG00000017180 3724 1.674 - - - - 0.903 - 0.771 - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]

There are 1424 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA