Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for r3hdml

Gene Name Gene ID Reads Annotation
r3hdml ENSDARG00000030650 133 R3H domain containing-like [Source:ZFIN;Acc:ZDB-GENE-090313-275]










Genes with expression patterns similar to r3hdml

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. r3hdml ENSDARG00000030650 133 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 R3H domain containing-like [Source:ZFIN;Acc:ZDB-GENE-090313-275]
2. TNIP2 ENSDARG00000074501 35 2.301 0.775 - - - - - 0.800 0.726 - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
3. zgc:112437 ENSDARG00000009215 50 2.282 - - 0.719 - - 0.761 0.802 - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
4. CABZ01026370.1 CABZ01026370.1 286 2.158 - 0.729 - - - 0.701 0.728 - -
5. crispld1b ENSDARG00000013293 200 1.716 - 0.924 - - - - 0.792 - - cysteine-rich secretory protein LCCL domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1204]
6. CR847510.1 CR847510.1 629 1.658 - 0.919 - - - - 0.739 - -
7. TMEM100 TMEM100 258 1.614 0.909 0.705 - - - - - - -
8. BX294434.1 ENSDARG00000061272 6493 1.595 - 0.823 - - - - 0.772 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
9. col15a1b ENSDARG00000061848 398 1.593 - 0.831 - - - 0.762 - - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
10. mmp23bb ENSDARG00000009825 133 1.586 - 0.820 - - - - 0.766 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
11. eng1a eng1a 484 1.586 0.863 - - - - - 0.723 - -
12. dmd ENSDARG00000008487, ENSDARG00000115779 536 1.574 - 0.816 - - - - - 0.758 - dystrophin [Source:ZFIN;Acc:ZDB-GENE-010426-1]
13. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 1.567 - 0.835 - - - - 0.732 - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
14. plcd4a ENSDARG00000057975 241 1.551 - 0.841 - - - 0.710 - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
15. BSCL2 ENSDARG00000037008 689 1.544 - 0.769 - - - - 0.775 - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
16. col9a3 ENSDARG00000037845 6564 1.543 - 0.808 - - - 0.735 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
17. mir301c 84 1.538 - - - - - - 0.802 - 0.736 microRNA 301c
18. fem1a ENSDARG00000067966 11 1.535 - 0.812 - - - - - - 0.723 fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
19. tnw 16679 1.53 - 0.792 - - - - 0.738 - - tenascin W, transcript variant X2
20. CU302436.1 ENSDARG00000114500 1619 1.526 - 0.795 - - - - 0.731 - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
21. thnsl2 ENSDARG00000032584 59 1.508 0.780 0.728 - - - - - - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
22. klc3 ENSDARG00000055965 116 1.506 - 0.806 - - - 0.700 - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
23. rtn2b ENSDARG00000057027 1391 1.504 - 0.762 - - - - 0.742 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
24. CU693480.1 CU693480.1 51 1.499 - - - - - - 0.722 0.777 -
25. C12H10orf71 C12H10orf71 595 1.494 - - - - - 0.750 0.744 - -
26. stk17a ENSDARG00000074715 528 1.492 - - - - - - 0.742 0.750 - serine/threonine kinase 17a [Source:ZFIN;Acc:ZDB-GENE-030131-5556]
27. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.49 0.714 0.776 - - - - - - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
28. si:ch73-112l6.1 ENSDARG00000093126 87 1.488 0.705 - - - - - 0.783 - - si:ch73-112l6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-14]
29. meox2b ENSDARG00000061818, ENSDARG00000116206 62 1.485 0.770 - - - - 0.715 - - - mesenchyme homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-060503-853]
30. FGL1 ENSDARG00000105380 147 1.482 - - - - - 0.715 0.767 - - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
31. acana ENSDARG00000035891 118 1.479 0.734 - - - - - 0.745 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
32. hapln1a ENSDARG00000089769 12334 1.479 - 0.746 - - - - 0.733 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
33. ubtd1a ENSDARG00000007382 143 1.479 - 0.766 - - - - 0.713 - - ubiquitin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-070424-93]
34. cdk15 ENSDARG00000006093 252 1.476 - 0.769 - - - - - 0.707 - cyclin-dependent kinase 15 [Source:ZFIN;Acc:ZDB-GENE-060421-7193]
35. CABZ01019904.1 ENSDARG00000104193 6 1.473 - 0.708 - - - 0.765 - - -
36. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.458 - 0.734 - - - - 0.724 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
37. sptb ENSDARG00000030490 7128 1.456 - 0.709 - - - - 0.747 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
38. zgc:136493 ENSDARG00000029259 132 1.454 - 0.732 - - - 0.722 - - - zgc:136493 [Source:ZFIN;Acc:ZDB-GENE-060512-216]
39. tnnt2d ENSDARG00000002988 7590 1.451 - 0.728 - - - - 0.723 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
40. rp42-pen rp42-pen 3395 1.442 - 0.729 - - - - 0.713 - -
41. C13H10orf71 3489 1.438 - 0.713 - - - - 0.725 - - chromosome 13 C10orf71 homolog
42. notum2 ENSDARG00000088411 823 1.437 0.710 0.727 - - - - - - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
43. zgc:195001 ENSDARG00000070484 3281 1.436 - 0.731 - - - - 0.705 - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
44. MUSTN1 MUSTN1 1882 1.436 - 0.717 - - - - 0.719 - -
45. CMYA5 ENSDARG00000061379 65 1.426 0.706 0.720 - - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
46. plod2 ENSDARG00000011821 1656 1.418 - 0.717 - - - - 0.701 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
47. AL954676.2 AL954676.2 50 1.417 0.705 - - - - - - - 0.712
48. cacna2d3 ENSDARG00000078760 211 0.974 - 0.974 - - - - - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
49. syngr3b ENSDARG00000025034 290 0.962 - 0.962 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
50. BX511257.1 BX511257.1 66 0.951 - 0.951 - - - - - - -
51. dpysl5a ENSDARG00000011141 1827 0.946 - 0.946 - - - - - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
52. sncga ENSDARG00000034423, ENSDARG00000112260 5469 0.943 - 0.943 - - - - - - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
53. tcap ENSDARG00000007344 276 0.94 - 0.940 - - - - - - - titin-cap (telethonin) [Source:ZFIN;Acc:ZDB-GENE-070501-5]
54. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 0.936 - 0.936 - - - - - - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
55. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.934 - 0.934 - - - - - - -
56. adra2da ENSDARG00000091277 173 0.925 0.925 - - - - - - - - adrenergic, alpha-2D-, receptor a [Source:ZFIN;Acc:ZDB-GENE-021010-4]
57. eif4e1b ENSDARG00000014565 12 0.925 0.925 - - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
58. qrsl1 ENSDARG00000032704 200 0.924 - 0.924 - - - - - - - glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5540]
59. acrc 242 0.918 - 0.918 - - - - - - - acidic repeat containing, transcript variant X3
60. AKR1C1 AKR1C1 32 0.915 - 0.915 - - - - - - -
61. sprb ENSDARG00000058553 1694 0.912 - 0.912 - - - - - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
62. B4GALNT1 B4GALNT1 352 0.912 - 0.912 - - - - - - -
63. pih1d2 ENSDARG00000014849 389 0.906 - 0.906 - - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
64. HDX ENSDARG00000079382 513 0.906 - 0.906 - - - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
65. nkx6.1 ENSDARG00000022569 3779 0.906 - 0.906 - - - - - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
66. zic4 ENSDARG00000031307 1228 0.903 - 0.903 - - - - - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
67. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 0.894 - 0.894 - - - - - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
68. ankrd24 ENSDARG00000062103 70 0.892 0.892 - - - - - - - - ankyrin repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-050208-747]
69. phox2a ENSDARG00000007406 470 0.892 0.892 - - - - - - - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
70. TIMP4 TIMP4 599 0.892 0.892 - - - - - - - -
71. CHL1 CHL1 1553 0.891 - 0.891 - - - - - - -
72. vsnl1a ENSDARG00000023228 1584 0.89 - 0.890 - - - - - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
73. SNAP91 ENSDARG00000098809 556 0.889 - 0.889 - - - - - - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
74. CABZ01029822.1 ENSDARG00000086931 1654 0.888 - 0.888 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
75. atp1a3a ENSDARG00000018259 5393 0.887 - 0.887 - - - - - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
76. si:dkeyp-118a3.2 ENSDARG00000086957 2106 0.886 - 0.886 - - - - - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
77. sox21b ENSDARG00000008540 1460 0.885 - 0.885 - - - - - - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
78. nrp1b ENSDARG00000027290 170 0.885 - 0.885 - - - - - - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
79. lect1 7551 0.883 - 0.883 - - - - - - - leukocyte cell derived chemotaxin 1, transcript variant X1
80. jag1a ENSDARG00000030289 1275 0.882 - 0.882 - - - - - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
81. mnx2a ENSDARG00000042106 939 0.881 - 0.881 - - - - - - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
82. mrrf ENSDARG00000034174, ENSDARG00000115754 791 0.881 - 0.881 - - - - - - - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
83. prx ENSDARG00000017246 6183 0.88 - 0.880 - - - - - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
84. atp1b4 ENSDARG00000053262 1337 0.879 - 0.879 - - - - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
85. ascl1a ENSDARG00000038386 1290 0.876 - 0.876 - - - - - - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
86. NRAP ENSDARG00000009341 3565 0.874 - 0.874 - - - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
87. nanog ENSDARG00000075113 10 0.873 - - 0.873 - - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
88. atp2b3b ENSDARG00000023445 1424 0.873 - 0.873 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
89. sall3b ENSDARG00000057586 982 0.871 - 0.871 - - - - - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
90. STRIP2 ENSDARG00000059003 394 0.87 - 0.870 - - - - - - - striatin interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120328-1]
91. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 0.867 - 0.867 - - - - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
92. adam23a ENSDARG00000062323 580 0.866 - 0.866 - - - - - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
93. kera ENSDARG00000056938 2434 0.865 - 0.865 - - - - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
94. clul1 ENSDARG00000055595 103 0.864 - 0.864 - - - - - - - clusterin-like 1 (retinal) [Source:ZFIN;Acc:ZDB-GENE-031118-57]
95. slc32a1 ENSDARG00000059775 1092 0.863 - 0.863 - - - - - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
96. tmem151b tmem151b 442 0.863 - 0.863 - - - - - - -
97. hnmt ENSDARG00000012796 302 0.862 0.862 - - - - - - - - histamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040801-157]
98. CABZ01079764.1 CABZ01079764.1 12103 0.861 - 0.861 - - - - - - -
99. sumf2 ENSDARG00000069497 51 0.86 - 0.860 - - - - - - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
100. cers6 ENSDARG00000053583 247 0.86 - 0.860 - - - - - - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]

There are 820 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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