Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for r3hdm4

Gene Name Gene ID Reads Annotation
r3hdm4 ENSDARG00000063254 201 R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]










Genes with expression patterns similar to r3hdm4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. r3hdm4 ENSDARG00000063254 201 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
2. pou3f2a ENSDARG00000070220 817 2.241 - - - - - 0.767 0.742 0.732 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
3. nr4a2a ENSDARG00000017007 140 1.821 - - - - - 1.000 0.821 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
4. rpz3 ENSDARG00000069728 11 1.821 - - - - - 1.000 0.821 - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
5. si:dkey-253d23.9 ENSDARG00000074820 24 1.821 - - - - - 1.000 0.821 - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
6. foxb1a ENSDARG00000089042 101 1.803 - - - - - 1.000 0.803 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
7. efna3a ENSDARG00000014675 68 1.779 - - - - - 0.955 0.824 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
8. si:dkey-162b3.5 si:dkey-162b3.5 24 1.772 - - - - - 1.000 0.772 - -
9. CR339051.1 CR339051.1 9 1.772 - - - - - 1.000 0.772 - -
10. tceanc2 ENSDARG00000062919 32 1.772 - - - - - 1.000 0.772 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
11. cdc42ep2 ENSDARG00000053959 32 1.772 - - - - - 1.000 0.772 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
12. CU633848.1 CU633848.1 4 1.772 - - - - - 1.000 0.772 - -
13. CABZ01087111.1 CABZ01087111.1 42 1.772 - - - 0.772 - 1.000 - - -
14. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.75 - - - - - 0.937 0.813 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
15. klhl24 klhl24 40 1.747 - - - 0.747 - 1.000 - - -
16. pole2 ENSDARG00000100028 42 1.746 - - - 0.746 - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
17. CABZ01041962.1 ENSDARG00000076082 690 1.714 0.739 0.975 - - - - - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
18. cxcl-c1c cxcl-c1c 159 1.702 - 0.997 - 0.705 - - - - -
19. rnf165a ENSDARG00000077906 133 1.7 - - - - - 1.000 0.700 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
20. clstn1 ENSDARG00000031720 5286 1.694 0.730 0.964 - - - - - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
21. sstr1a ENSDARG00000104922 22 1.648 - - - - - 0.878 0.770 - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
22. lin7b ENSDARG00000037932 150 1.634 - - - - - 0.728 0.906 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
23. sst3 61 1.634 - - - - - 0.862 0.772 - - somatostatin 3
24. mir219-1 101 1.615 - - - - - 0.794 0.821 - - microRNA 219-1
25. sox12 ENSDARG00000025847 681 1.574 - - - - - 0.712 0.862 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
26. odz4 odz4 822 1.57 0.712 - - - - - 0.858 - -
27. NETO2 121 1.569 - - - - - 0.864 0.705 - - neuropilin and tolloid like 2, transcript variant X2
28. si:ch211-141e20.2 ENSDARG00000093349 61 1.563 - - - 0.813 - - 0.750 - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
29. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.557 - - - 0.829 - 0.728 - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
30. si:dkey-276l13.6 si:dkey-276l13.6 71 1.546 0.776 - - - - - 0.770 - -
31. brinp3b ENSDARG00000075352 14 1.543 - - - - - 0.771 0.772 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
32. ANK1_1 ANK1_1 507 1.537 - - - - - 0.717 0.820 - -
33. BX323994.1 ENSDARG00000078927 15 1.501 - - - 0.729 - - 0.772 - - uncharacterized LOC108190035 [Source:NCBI gene;Acc:108190035]
34. BX897671.1 BX897671.1 10 1.5 - - - - - 0.728 0.772 - -
35. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.477 - - - - - 0.764 0.713 - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
36. PPP2R2A PPP2R2A 50 1.472 - - - 0.708 - 0.764 - - -
37. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.472 - - - - - 0.747 0.725 - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
38. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.44 - - - - - 0.717 0.723 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
39. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.416 0.709 - - - - - - 0.707 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
40. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.413 0.706 - - - - - - 0.707 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
41. BX322608.1 ENSDARG00000111690 326 1 - - - - - 1.000 - - -
42. CMA1_9 CMA1_9 1 1 - - - - - 1.000 - - -
43. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - 1.000 - - -
44. zgc:175284 ENSDARG00000078159 29 1 - - - - - 1.000 - - - zgc:175284 [Source:ZFIN;Acc:ZDB-GENE-080219-49]
45. asic4a ENSDARG00000025162 25 1 - - - - - 1.000 - - - acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
46. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
47. polg ENSDARG00000060951 33 1 - - - - - 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
48. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1 - - - - - 1.000 - - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
49. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
50. si:ch211-262l19.1 si:ch211-262l19.1 0 1 - - - - - 1.000 - - -
51. zgc:153846 ENSDARG00000040738 1 1 - - - - - 1.000 - - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
52. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
53. ZP2_2 ZP2_2 28 1 - - - - - 1.000 - - -
54. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 1 - - - - - 1.000 - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
55. C24H8orf34 C24H8orf34 1 1 - - - - - 1.000 - - -
56. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
57. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - - - - - 1.000 - - -
58. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - - - - - 1.000 - - -
59. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
60. si:ch73-226l13.2 ENSDARG00000095939 0 1 - - - - - 1.000 - - - si:ch73-226l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-18]
61. si:ch211-260c23.1 13 1 - - - - - 1.000 - - - si:ch211-260c23.1, transcript variant X7
62. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
63. samd10b ENSDARG00000094377 18 1 - - - - - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
64. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
65. IGFN1_2 IGFN1_2 3 1 - - - - - 1.000 - - -
66. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
67. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
68. BX548000.1 ENSDARG00000099044 45 1 - - - - - 1.000 - - -
69. rxfp1 ENSDARG00000090071 6 1 - - - - - 1.000 - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
70. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
71. si:dkey-23a23.1 ENSDARG00000094824 1 1 - - - - - 1.000 - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
72. htr1aa ENSDARG00000093745 0 1 - - - - - 1.000 - - - 5-hydroxytryptamine (serotonin) receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-071203-1]
73. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
74. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
75. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
76. st8sia1 ENSDARG00000098221 34 1 - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
77. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
78. GABRA3 ENSDARG00000090883 5 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
79. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - - 1.000 - - -
80. zgc:136678 zgc:136678 2 1 - - - - - 1.000 - - -
81. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
82. si:dkey-24c2.6 si:dkey-24c2.6 1 1 - - - - - 1.000 - - -
83. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
84. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
85. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
86. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1 - - - - - 1.000 - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
87. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - 1.000 - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
88. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - 1.000 - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
89. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
90. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
91. ENDOD1_3 ENDOD1_3 9 1 - - - - - 1.000 - - -
92. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
93. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
94. C3H19orf66 C3H19orf66 20 1 - - - - - 1.000 - - -
95. grpr ENSDARG00000056620 66 1 - - - - - 1.000 - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
96. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
97. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
98. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
99. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
100. si:dkey-222f2.7 ENSDARG00000071667 1 1 - - - - - 1.000 - - - si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]

There are 1130 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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