Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for r3hdm4

Gene Name Gene ID Reads Annotation
r3hdm4 ENSDARG00000063254 201 R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]










Genes with expression patterns similar to r3hdm4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. r3hdm4 ENSDARG00000063254 201 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
2. pou3f2a ENSDARG00000070220 817 2.241 - - - - - 0.767 0.742 0.732 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
3. rpz3 ENSDARG00000069728 11 1.821 - - - - - 1.000 0.821 - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
4. si:dkey-253d23.9 ENSDARG00000074820 24 1.821 - - - - - 1.000 0.821 - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
5. nr4a2a ENSDARG00000017007 140 1.821 - - - - - 1.000 0.821 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
6. foxb1a ENSDARG00000089042 101 1.803 - - - - - 1.000 0.803 - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
7. efna3a ENSDARG00000014675 68 1.779 - - - - - 0.955 0.824 - - ephrin-A3a [Source:ZFIN;Acc:ZDB-GENE-060503-186]
8. cdc42ep2 ENSDARG00000053959 32 1.772 - - - - - 1.000 0.772 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
9. si:dkey-162b3.5 si:dkey-162b3.5 24 1.772 - - - - - 1.000 0.772 - -
10. CR339051.1 CR339051.1 9 1.772 - - - - - 1.000 0.772 - -
11. CU633848.1 CU633848.1 4 1.772 - - - - - 1.000 0.772 - -
12. CABZ01087111.1 CABZ01087111.1 42 1.772 - - - 0.772 - 1.000 - - -
13. tceanc2 ENSDARG00000062919 32 1.772 - - - - - 1.000 0.772 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
14. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 1.75 - - - - - 0.937 0.813 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
15. klhl24 klhl24 40 1.747 - - - 0.747 - 1.000 - - -
16. pole2 ENSDARG00000100028 42 1.746 - - - 0.746 - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
17. CABZ01041962.1 ENSDARG00000076082 690 1.714 0.739 0.975 - - - - - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
18. cxcl-c1c cxcl-c1c 159 1.702 - 0.997 - 0.705 - - - - -
19. rnf165a ENSDARG00000077906 133 1.7 - - - - - 1.000 0.700 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
20. clstn1 ENSDARG00000031720 5286 1.694 0.730 0.964 - - - - - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
21. sstr1a ENSDARG00000104922 22 1.648 - - - - - 0.878 0.770 - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
22. lin7b ENSDARG00000037932 150 1.634 - - - - - 0.728 0.906 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
23. sst3 61 1.634 - - - - - 0.862 0.772 - - somatostatin 3
24. mir219-1 101 1.615 - - - - - 0.794 0.821 - - microRNA 219-1
25. sox12 ENSDARG00000025847 681 1.574 - - - - - 0.712 0.862 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
26. odz4 odz4 822 1.57 0.712 - - - - - 0.858 - -
27. NETO2 121 1.569 - - - - - 0.864 0.705 - - neuropilin and tolloid like 2, transcript variant X2
28. si:ch211-141e20.2 ENSDARG00000093349 61 1.563 - - - 0.813 - - 0.750 - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
29. fancg ENSDARG00000024967, ENSDARG00000113462 82 1.557 - - - 0.829 - 0.728 - - - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
30. si:dkey-276l13.6 si:dkey-276l13.6 71 1.546 0.776 - - - - - 0.770 - -
31. brinp3b ENSDARG00000075352 14 1.543 - - - - - 0.771 0.772 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
32. ANK1_1 ANK1_1 507 1.537 - - - - - 0.717 0.820 - -
33. BX323994.1 ENSDARG00000078927 15 1.501 - - - 0.729 - - 0.772 - - uncharacterized LOC108190035 [Source:NCBI gene;Acc:108190035]
34. BX897671.1 BX897671.1 10 1.5 - - - - - 0.728 0.772 - -
35. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.477 - - - - - 0.764 0.713 - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
36. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.472 - - - - - 0.747 0.725 - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
37. PPP2R2A PPP2R2A 50 1.472 - - - 0.708 - 0.764 - - -
38. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.44 - - - - - 0.717 0.723 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
39. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.416 0.709 - - - - - - 0.707 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
40. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.413 0.706 - - - - - - 0.707 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
41. caspbl ENSDARG00000094433 1 1 - - - - - 1.000 - - - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
42. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
43. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
44. C24H8orf34 C24H8orf34 1 1 - - - - - 1.000 - - -
45. ENDOD1_3 ENDOD1_3 9 1 - - - - - 1.000 - - -
46. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
47. MYO9B ENSDARG00000078313 97 1 - - - - - 1.000 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
48. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - - - - 1.000 - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
49. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
50. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
51. serpine3 ENSDARG00000057108 49 1 - - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
52. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
53. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
54. rnaset2l ENSDARG00000058413 17 1 - - - - - 1.000 - - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
55. ush2a ENSDARG00000029482 10 1 - - - - - 1.000 - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
56. ADAMTS15 ADAMTS15 73 1 - - - - - 1.000 - - -
57. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
58. pgap2 ENSDARG00000044596 60 1 - - - - - 1.000 - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
59. si:ch211-10j20.4 si:ch211-10j20.4 0 1 - - - - - 1.000 - - -
60. NUGGC NUGGC 9 1 - - - - - 1.000 - - -
61. CU638740.4 CU638740.4 1 1 - - - - - 1.000 - - -
62. PPAPDC3 PPAPDC3 14 1 - - - - - 1.000 - - -
63. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
64. nid2b ENSDARG00000009471 4 1 - - - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
65. hif1al2 ENSDARG00000044550 140 1 - - - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
66. gzmk ENSDARG00000028780 1 1 - - - - - 1.000 - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
67. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - - 1.000 - - -
68. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
69. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
70. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
71. C3H19orf66 C3H19orf66 20 1 - - - - - 1.000 - - -
72. CABZ01051641.1 CABZ01051641.1 0 1 - - - - - 1.000 - - -
73. si:ch1073-219n12.1 71 1 - - - - - 1.000 - - - si:ch1073-219n12.1, transcript variant X1
74. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
75. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
76. si:dkey-111b14.2 si:dkey-111b14.2 25 1 - - - - - 1.000 - - -
77. CU929159.1 CU929159.1 0 1 - - - - - 1.000 - - -
78. ahr1b ENSDARG00000023537 44 1 - - - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
79. antxr1d ENSDARG00000060845 10 1 - - - - - 1.000 - - - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
80. htr1bd htr1bd 8 1 - - - - - 1.000 - - -
81. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
82. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
83. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
84. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
85. taar14d ENSDARG00000091705, ENSDARG00000111452 1 1 - - - - - 1.000 - - - trace amine associated receptor 14d [Source:ZFIN;Acc:ZDB-GENE-041210-315]
86. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
87. gpr12 ENSDARG00000062934 7 1 - - - - - 1.000 - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
88. si:ch211-196c10.5 si:ch211-196c10.5 3 1 - - - - - 1.000 - - -
89. si:ch211-260g14.9 si:ch211-260g14.9 2 1 - - - - - 1.000 - - -
90. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
91. CCSER1 ENSDARG00000075919 16 1 - - - - - 1.000 - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
92. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
93. CU468896.2 CU468896.2 38 1 - - - - - 1.000 - - -
94. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
95. slc6a11a ENSDARG00000074002 189 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
96. leprel4 leprel4 34 1 - - - - - 1.000 - - -
97. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
98. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
99. grapb ENSDARG00000022668 6 1 - - - - - 1.000 - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
100. BX322608.1 ENSDARG00000111690 326 1 - - - - - 1.000 - - -

There are 1130 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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