Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for r3hcc1

Gene Name Gene ID Reads Annotation
r3hcc1 ENSDARG00000099593 188 R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]










Genes with expression patterns similar to r3hcc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. r3hcc1 ENSDARG00000099593 188 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
2. HMBOX1 HMBOX1 67 2.49 0.718 0.919 - - - 0.853 - - -
3. USP53 USP53 5 1.724 0.805 0.919 - - - - - - -
4. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.724 0.805 0.919 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
5. CR628395.1 ENSDARG00000116298 75 1.724 0.805 0.919 - - - - - - -
6. gprc6a ENSDARG00000005371 7 1.69 - 0.919 - - - - 0.771 - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
7. ugt2b5 ugt2b5 17 1.669 - 0.919 - - - - 0.750 - -
8. SLC38A8 SLC38A8 17 1.634 0.805 0.829 - - - - - - -
9. CABZ01063556.1 ENSDARG00000116344 319 1.612 - 0.820 - - - - 0.792 - - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
10. fto ENSDARG00000044216 33 1.598 - 0.780 - - - - 0.818 - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
11. CD53 CD53 108 1.574 0.805 - - - - 0.769 - - -
12. BX569778.1 BX569778.1 36 1.558 0.805 - - - - - 0.753 - -
13. si:ch1073-228p2.2 si:ch1073-228p2.2 24 1.536 - 0.718 - - - - 0.818 - -
14. admb ENSDARG00000069027 67 1.507 0.805 - - - - - 0.702 - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
15. si:dkey-249p7.4 ENSDARG00000096663 9 1.501 0.734 - - - - - 0.767 - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
16. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 1.469 - 0.741 - - - - 0.728 - - ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
17. mtap ENSDARG00000037261 610 1.428 - - - - - 0.712 0.716 - - methylthioadenosine phosphorylase [Source:ZFIN;Acc:ZDB-GENE-040426-1505]
18. ptpdc1 ptpdc1 281 0.941 0.941 - - - - - - - -
19. lft1 ENSDARG00000019920 66 0.937 - 0.937 - - - - - - - lefty1 [Source:ZFIN;Acc:ZDB-GENE-990630-10]
20. SLC4A8 ENSDARG00000015531 16 0.932 - 0.932 - - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
21. wu:fc28f08 wu:fc28f08 188 0.932 - 0.932 - - - - - - -
22. si:ch211-244b2.3 ENSDARG00000069244 19 0.93 - 0.930 - - - - - - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
23. trmt2b ENSDARG00000033967 127 0.928 - 0.928 - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
24. st6galnac5a ENSDARG00000039220 76 0.922 0.922 - - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
25. si:dkey-277m11.2 ENSDARG00000094879 15 0.919 - 0.919 - - - - - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
26. asic2 ENSDARG00000006849 18 0.919 - 0.919 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
27. PPP1R16A ENSDARG00000076980 40 0.919 - 0.919 - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
28. lsm14b ENSDARG00000025386 23 0.919 - 0.919 - - - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
29. CA4 CA4 1 0.919 - 0.919 - - - - - - -
30. ENSDARG00000088164 ENSDARG00000088164 59 0.919 - 0.919 - - - - - - -
31. CR854923.1 CR854923.1 18 0.919 - 0.919 - - - - - - -
32. anks4b ENSDARG00000036846 8 0.919 - 0.919 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
33. atp8b3 ENSDARG00000042285 31 0.919 - 0.919 - - - - - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
34. svilb_1 ENSDARG00000014651 60 0.919 - 0.919 - - - - - - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
35. mxe ENSDARG00000014427 6 0.919 - 0.919 - - - - - - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
36. AL929453.1 ENSDARG00000115950 31 0.919 - 0.919 - - - - - - -
37. si:dkey-15h19.3 si:dkey-15h19.3 5 0.919 - 0.919 - - - - - - -
38. BX004980.1 ENSDARG00000099680 10 0.919 - 0.919 - - - - - - -
39. aftphb ENSDARG00000071347 161 0.919 - 0.919 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
40. dapp1 ENSDARG00000039535 23 0.919 - 0.919 - - - - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
41. im:7136021 ENSDARG00000054128 79 0.919 - 0.919 - - - - - - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
42. si:ch211-151h10.2 ENSDARG00000068250 14 0.919 - 0.919 - - - - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
43. F13A1 F13A1 1 0.919 - 0.919 - - - - - - -
44. fmn2b ENSDARG00000061778 179 0.919 - 0.919 - - - - - - - formin 2b [Source:ZFIN;Acc:ZDB-GENE-080225-35]
45. evi5b ENSDARG00000070839 239 0.919 - 0.919 - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
46. si:ch73-381a20.2 si:ch73-381a20.2 11 0.919 - 0.919 - - - - - - -
47. zgc:171501 ENSDARG00000075375 11 0.919 - 0.919 - - - - - - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
48. bgna ENSDARG00000017884 9 0.919 - 0.919 - - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
49. slc35f3a ENSDARG00000075909 1 0.919 - 0.919 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
50. tmc1 23 0.919 - 0.919 - - - - - - - transmembrane channel-like 1, transcript variant X1
51. si:dkeyp-3f10.12 ENSDARG00000105791 3 0.919 - 0.919 - - - - - - - si:dkeyp-3f10.12 [Source:ZFIN;Acc:ZDB-GENE-081104-20]
52. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 0.919 - 0.919 - - - - - - -
53. ptk2.2 ptk2.2 3 0.919 - 0.919 - - - - - - -
54. si:dkey-222f2.1 ENSDARG00000043242 192 0.919 - 0.919 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
55. si:dkey-7i4.1 ENSDARG00000086897 2 0.919 - 0.919 - - - - - - - si:dkey-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-081028-64]
56. si:ch211-79g12.1 ENSDARG00000116692 2 0.919 - 0.919 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
57. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 0.919 - 0.919 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
58. creb5b ENSDARG00000070536 9 0.919 - 0.919 - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
59. si:dkey-177p2.18 ENSDARG00000091633 91 0.919 - 0.919 - - - - - - - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
60. CLDND1_1 CLDND1_1 50 0.919 - 0.919 - - - - - - -
61. neurod2 ENSDARG00000016854 6 0.919 - 0.919 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
62. sumo2a ENSDARG00000104390 4 0.919 - 0.919 - - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
63. cnnm4 cnnm4 2 0.919 - 0.919 - - - - - - -
64. zgc:171544 zgc:171544 11 0.919 - 0.919 - - - - - - -
65. ABR ENSDARG00000095180 4 0.919 - 0.919 - - - - - - - ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
66. oxgr1a.1 ENSDARG00000033684 24 0.919 - 0.919 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
67. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 0.919 - 0.919 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
68. psma6l ENSDARG00000043899 3 0.919 - 0.919 - - - - - - - proteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
69. PBRM1 ENSDARG00000003877 225 0.919 - 0.919 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
70. BX649417.1 ENSDARG00000117387 1 0.919 - 0.919 - - - - - - -
71. zgc:136908 ENSDARG00000011983 97 0.919 - 0.919 - - - - - - - zgc:136908 [Source:ZFIN;Acc:ZDB-GENE-060312-22]
72. si:dkey-20i20.12 si:dkey-20i20.12 7 0.919 - 0.919 - - - - - - -
73. EGR4_1 EGR4_1 14 0.919 - 0.919 - - - - - - -
74. fgf10b ENSDARG00000100475 17 0.919 - 0.919 - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
75. RP1L1 RP1L1 15 0.919 - 0.919 - - - - - - -
76. si:ch211-119c24.1 si:ch211-119c24.1 17 0.919 - 0.919 - - - - - - -
77. pcolce2a ENSDARG00000008450 22 0.919 - 0.919 - - - - - - - procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]
78. ODF3L2 40 0.919 - 0.919 - - - - - - - outer dense fiber of sperm tails 3-like 2
79. si:ch211-145h19.1 31 0.919 - 0.919 - - - - - - - si:ch211-145h19.1
80. EFEMP1 32 0.919 - 0.919 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
81. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 0.919 - 0.919 - - - - - - -
82. atn1 ENSDARG00000092067 257 0.919 - 0.919 - - - - - - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
83. QSOX2 ENSDARG00000077174 26 0.919 - 0.919 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
84. olfml2bb ENSDARG00000021480 256 0.919 - 0.919 - - - - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
85. ROCK2 ROCK2 8 0.919 - 0.919 - - - - - - -
86. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 0.919 - 0.919 - - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
87. CU302326.2 CU302326.2 54 0.919 - 0.919 - - - - - - -
88. si:ch211-253d24.2 si:ch211-253d24.2 12 0.919 - 0.919 - - - - - - -
89. spo11 ENSDARG00000013837 7 0.919 - 0.919 - - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
90. si:ch211-134d5.3 si:ch211-134d5.3 1 0.919 - 0.919 - - - - - - -
91. Metazoa_SRP_19 Metazoa_SRP_19 17 0.919 - 0.919 - - - - - - -
92. zgc:173594 57 0.919 - 0.919 - - - - - - - zgc:173594
93. si:dkey-16i5.8 ENSDARG00000096722 1 0.919 - 0.919 - - - - - - - si:dkey-16i5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1207]
94. SNTB2 ENSDARG00000051763 2 0.919 - 0.919 - - - - - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
95. BX957311.1 ENSDARG00000097710 1 0.919 - 0.919 - - - - - - -
96. cx50.5 cx50.5 15 0.919 - 0.919 - - - - - - -
97. ctso ENSDARG00000052855 29 0.919 - 0.919 - - - - - - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
98. BX511182.1 BX511182.1 8 0.919 - 0.919 - - - - - - -
99. si:dkey-250k15.4 ENSDARG00000092169 19 0.919 - 0.919 - - - - - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
100. PGBD4_4 PGBD4_4 15 0.919 - 0.919 - - - - - - -

There are 771 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA