Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pygmb

Gene Name Gene ID Reads Annotation
pygmb ENSDARG00000013317 5454 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]










Genes with expression patterns similar to pygmb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pygmb ENSDARG00000013317 5454 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
2. zgc:158296 ENSDARG00000070923 3935 4.86 0.919 0.826 0.703 - - - 0.874 0.770 0.768 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
3. casq1b ENSDARG00000018105 2643 4.786 - 0.736 - 0.720 0.788 - 0.903 0.818 0.821 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
4. mybphb ENSDARG00000003081 5208 4.371 0.965 0.846 - - - 0.889 0.948 - 0.723 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
5. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.228 - 0.816 0.761 - - 0.892 0.942 - 0.817 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
6. eno3 ENSDARG00000039007 11355 4.203 0.971 0.800 - - 0.842 - 0.851 - 0.739 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
7. hhatla ENSDARG00000039051 6598 4.056 - 0.837 0.741 - - - 0.887 0.774 0.817 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
8. CR847973.1 ENSDARG00000115516 8754 3.903 - 0.733 0.750 - - - 0.963 0.704 0.753
9. ryr1b ENSDARG00000023797 5693 3.467 0.886 0.871 - - - - 0.951 - 0.759 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
10. nmrk2 ENSDARG00000067848 10293 3.378 - 0.816 - - 0.777 0.831 0.954 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
11. hspg2 ENSDARG00000076564 3440 3.356 - 0.769 - - - 0.886 0.897 0.804 - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
12. ank1 ank1 5209 3.278 - 0.813 - - 0.838 0.892 - - 0.735
13. PTPLA PTPLA 4044 3.261 - 0.862 0.726 - - - 0.901 - 0.772
14. pbxip1a ENSDARG00000071015 4960 3.255 - 0.850 - - - - 0.937 0.746 0.722 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
15. txlnbb ENSDARG00000076241 6396 3.232 - 0.866 - - 0.712 - 0.873 - 0.781 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
16. chrnd ENSDARG00000019342 2728 3.232 - 0.826 - - - - 0.873 0.831 0.702 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
17. pvalb4 ENSDARG00000024433 35736 3.186 - - 0.832 0.708 0.727 - 0.919 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
18. chrna1 ENSDARG00000009021 2931 3.186 - 0.796 - - - - 0.923 0.741 0.726 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
19. trim55a ENSDARG00000029596 2858 3.149 - 0.824 0.718 - - - 0.834 - 0.773 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
20. mybpc2b ENSDARG00000021265 9618 3.122 - 0.800 - - 0.718 - 0.852 - 0.752 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
21. vcl vcl 6667 3.092 - 0.810 0.761 - 0.741 - - - 0.780
22. atp2a1 ENSDARG00000020574 291561 2.928 - - 0.752 - 0.726 - 0.750 - 0.700 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
23. mdh2 ENSDARG00000043371 14485 2.678 - - - - - 0.948 0.904 - 0.826 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
24. DNAJA4 ENSDARG00000051762 5657 2.638 0.909 0.839 - - - - 0.890 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
25. farsa ENSDARG00000098825 2813 2.618 0.985 0.789 - - - - 0.844 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
26. cfl2 ENSDARG00000014106 8051 2.616 - 0.839 - - - 0.897 0.880 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
27. zgc:66479 ENSDARG00000008732 3347 2.573 0.970 0.798 - - - - 0.805 - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
28. sh3bgr ENSDARG00000021633 3498 2.565 - 0.818 - - - - 0.893 0.854 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
29. pygma ENSDARG00000055518 15972 2.555 - 0.861 - - 0.805 - 0.889 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
30. myoz2a ENSDARG00000012311 1373 2.532 - 0.748 - - - - 0.929 0.855 - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
31. mdh1b ENSDARG00000018008 3196 2.527 - 0.806 - - - - 0.923 - 0.798 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
32. alpk3a ENSDARG00000078989 1992 2.523 - 0.865 0.798 - - - 0.860 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
33. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 2.514 0.967 0.750 - - - - 0.797 - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
34. BX294434.1 ENSDARG00000061272 6493 2.51 - 0.794 - - - - 0.920 - 0.796 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
35. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.509 - 0.866 0.730 - - - 0.913 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
36. sptb ENSDARG00000030490 7128 2.503 - 0.856 0.732 - - - 0.915 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
37. synpo2b ENSDARG00000077157 1009 2.502 - - - - - - 0.947 0.811 0.744 synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
38. MYOT ENSDARG00000076312 1791 2.497 - 0.823 0.749 - - - 0.925 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
39. znf106a ENSDARG00000016651 6049 2.492 - 0.806 - - - - 0.928 - 0.758 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
40. tnnt2d ENSDARG00000002988 7590 2.486 - 0.774 - - - - 0.911 - 0.801 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
41. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.483 - - 0.751 - - - 0.934 - 0.798 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
42. rp42-pen rp42-pen 3395 2.481 - 0.835 - - - - 0.874 - 0.772
43. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 2.48 0.982 0.708 - - - - - - 0.790 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
44. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.47 - 0.803 - - 0.789 - 0.878 - -
45. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 2.468 - 0.733 - - - - 0.854 0.881 - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
46. jph1a ENSDARG00000058603 2852 2.466 - 0.832 - - - - 0.910 - 0.724 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
47. trdn ENSDARG00000041779 4283 2.451 - 0.792 - - - - 0.925 - 0.734 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
48. pcmt ENSDARG00000015201 5132 2.448 - 0.817 - - - - 0.850 - 0.781 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
49. myom1a ENSDARG00000061249 10230 2.448 - - 0.741 - - - 0.967 - 0.740 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
50. ube2i ube2i 13024 2.446 0.834 - - - - 0.887 0.725 - -
51. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 2.443 - 0.791 - - - - 0.898 - 0.754 capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
52. txnipb ENSDARG00000070000 2365 2.443 - 0.745 - - - - 0.916 - 0.782 thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
53. tgm2a ENSDARG00000070157 4516 2.44 - - - - 0.850 - 0.854 - 0.736 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
54. MYOM1 MYOM1 3870 2.436 - 0.806 0.742 - - - 0.888 - -
55. mef2d ENSDARG00000040237 6144 2.435 - 0.844 - - - - 0.809 0.782 - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
56. mafa ENSDARG00000015890 2140 2.432 - 0.764 - - - - 0.950 - 0.718 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
57. prx ENSDARG00000017246 6183 2.428 - 0.758 - - - - 0.943 - 0.727 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
58. ipo7 ENSDARG00000035751 7095 2.422 0.931 0.729 - - - - 0.762 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
59. myod1 ENSDARG00000030110 6019 2.422 - 0.778 - - - - 0.924 - 0.720 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
60. USMG5 USMG5 10356 2.414 - 0.749 - - - 0.868 0.797 - -
61. ITGB1BP2 ENSDARG00000030176 2472 2.411 - 0.798 - - - - 0.913 - 0.700 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
62. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.401 - 0.724 - - - - 0.934 - 0.743 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
63. arpp21 ENSDARG00000061081 892 2.395 - 0.772 - - - - 0.778 0.845 - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
64. mir133b_1 671 2.376 - 0.780 - - - - 0.752 0.844 - microRNA 133b
65. klhl31 ENSDARG00000039066 13656 2.363 - - 0.741 - - - 0.786 - 0.836 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
66. BX530018.3 ENSDARG00000107022 614 2.359 - 0.770 - - 0.729 - 0.860 - -
67. sgcd ENSDARG00000098573 4980 2.357 - - - - 0.703 - 0.911 - 0.743 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
68. jph1b ENSDARG00000038826 7416 2.351 - 0.892 0.739 - - - 0.720 - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
69. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 2.351 - 0.771 - - - - 0.854 - 0.726 cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
70. col11a2 ENSDARG00000012422 3204 2.348 - 0.783 - - - - 0.717 0.848 - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
71. si:ch211-226o13.2 84923 2.348 - - 0.754 - 0.780 - - - 0.814 si:ch211-226o13.2
72. mybpc3 ENSDARG00000011615 7271 2.342 - 0.782 0.707 - - - - - 0.853 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
73. cmya5 ENSDARG00000061379 1423 2.332 - - - - - - 0.808 0.808 0.716 cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
74. tgm1l1 ENSDARG00000102106 1437 2.329 - 0.835 0.702 - - - 0.792 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
75. sgcb ENSDARG00000052341 4168 2.327 - 0.823 0.738 - - - - - 0.766 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
76. chrne ENSDARG00000034307, ENSDARG00000112263 1022 2.327 - 0.728 - - - - 0.787 0.812 - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
77. smyd2b ENSDARG00000005629 8181 2.325 - 0.875 - - 0.723 - - - 0.727 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
78. pgm1 ENSDARG00000013561 11984 2.311 0.818 - - - - 0.783 - - 0.710 phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
79. fgf6a ENSDARG00000009351 799 2.307 - 0.739 - - - - 0.801 0.767 - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
80. actn3b ENSDARG00000001431 15747 2.305 - 0.844 0.737 - 0.724 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
81. chac1 ENSDARG00000070426 17552 2.304 - - 0.711 - - - 0.807 - 0.786 ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
82. mylpfb ENSDARG00000002589 70167 2.302 - 0.834 0.713 - 0.755 - - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
83. AIMP1 ENSDARG00000060036 4136 2.272 - 0.828 0.718 - - - - - 0.726 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
84. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.271 - 0.784 - - 0.713 - - - 0.774 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
85. asb5b ENSDARG00000053222 1207 2.267 - 0.759 0.718 - - - 0.790 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
86. tnnt3b ENSDARG00000068457 101827 2.25 - 0.828 0.705 - 0.717 - - - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
87. si:ch1073-325m22.2 ENSDARG00000095921 8534 2.24 - 0.798 - - - - 0.725 - 0.717 si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
88. tpma ENSDARG00000033683 752432 2.231 - - 0.792 - 0.701 - 0.738 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
89. eef2l2 ENSDARG00000035256 6815 2.209 - 0.777 - - 0.705 - 0.727 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
90. SYNPO2 SYNPO2 7382 2.208 - - 0.724 - - - 0.724 - 0.760
91. slc25a11 ENSDARG00000035741 3377 2.197 - - 0.734 - - - 0.755 - 0.708 solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
92. epyc ENSDARG00000056950 7783 2.142 - 0.726 - - 0.714 - - - 0.702 epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
93. srl ENSDARG00000104587 11126 1.837 - 0.895 - - - - 0.942 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
94. murcb murcb 13655 1.826 - - - - - 0.871 0.955 - -
95. tnnc1b ENSDARG00000037539 13945 1.821 - 0.918 - - - - 0.903 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
96. si:ch211-151o1.2 si:ch211-151o1.2 3580 1.82 - - - - - 0.895 0.925 - -
97. CABZ01080590.2 CABZ01080590.2 2038 1.816 - - - - - 0.897 0.919 - -
98. C13H10orf71 3489 1.803 - 0.867 - - - - 0.936 - - chromosome 13 C10orf71 homolog
99. mrps24 ENSDARG00000100116 1750 1.797 0.969 - - - - - 0.828 - - mitochondrial ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-050522-393]
100. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 1.794 0.974 - - - - - 0.820 - - UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]

There are 1944 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA