Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pvalb6

Gene Name Gene ID Reads Annotation
pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]










Genes with expression patterns similar to pvalb6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
2. kcnn1a ENSDARG00000091306 95 2.609 0.801 1.000 - - - - 0.808 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
3. dync1i1 ENSDARG00000060948 554 2.329 0.814 0.720 - - - - 0.795 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
4. mnx2b ENSDARG00000030350 484 2.28 0.875 - - - - 0.701 0.704 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
5. ncam2 ENSDARG00000017466 175 1.853 - 1.000 - - - 0.853 - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
6. KCNJ6 ENSDARG00000058985 71 1.825 1.000 - - - - - 0.825 - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
7. BX248582.3 BX248582.3 3 1.823 - 1.000 - - - 0.823 - - -
8. CR753817.1 ENSDARG00000110927 26 1.823 - 1.000 - - - 0.823 - - -
9. cenpi ENSDARG00000052565 482 1.819 - - - - 0.993 0.826 - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
10. C2CD4A ENSDARG00000061416 61 1.802 0.802 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
11. il1rapl1b ENSDARG00000104853 52 1.801 - 1.000 - - - - 0.801 - - interleukin 1 receptor accessory protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-090109-2]
12. DBNDD1 DBNDD1 43 1.782 - 1.000 - - - - 0.782 - -
13. CU693369.1 CU693369.1 2 1.782 - 1.000 - - - - 0.782 - -
14. gaa ENSDARG00000090714 19 1.782 - 1.000 - - - - 0.782 - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
15. rcv1 rcv1 77 1.782 - 1.000 - - - - 0.782 - -
16. si:ch211-281p14.2 22 1.782 - 1.000 - - - - 0.782 - - si:ch211-281p14.2, transcript variant X2
17. drd2a ENSDARG00000056926 40 1.782 - 1.000 - - - - 0.782 - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
18. CU459094.1 ENSDARG00000110517 17 1.782 - 1.000 - - - - 0.782 - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
19. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1.778 - 0.955 - - - 0.823 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
20. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 1.778 - - - - 0.998 - 0.780 - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
21. ankrd45 ENSDARG00000011326 62 1.747 0.747 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
22. lgi1a ENSDARG00000020493 1218 1.745 - - - - 0.996 - 0.749 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
23. si:dkey-77f17.1 si:dkey-77f17.1 83 1.741 0.741 1.000 - - - - - - -
24. larp7 ENSDARG00000017315 1194 1.741 - - - - 0.994 0.747 - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
25. clu ENSDARG00000010434 498 1.74 - - - - 0.995 - - 0.745 - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
26. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1.739 0.916 - - - - 0.823 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
27. lig4 ENSDARG00000060620 369 1.738 0.741 - - - 0.997 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
28. GRIN3A ENSDARG00000075802 27 1.737 - 1.000 - - - - 0.737 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
29. CU633740.1 CU633740.1 8 1.735 - 0.953 - - - - 0.782 - -
30. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.728 - 1.000 - - - 0.728 - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
31. TUBB8P7_1 TUBB8P7_1 2722 1.727 - - - - 0.976 - 0.751 - -
32. mpz ENSDARG00000038609 1740 1.726 - 1.000 - - - - 0.726 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
33. sulf2 sulf2 1286 1.721 - - - - 0.982 - - 0.739 -
34. arih1l ENSDARG00000036870, ENSDARG00000112965 82 1.721 - 1.000 - - - - 0.721 - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
35. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1.713 - 1.000 - - - - 0.713 - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
36. pcloa ENSDARG00000063299 353 1.708 - - - - - 0.790 0.918 - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
37. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1.701 - 0.919 - - - - 0.782 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
38. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.692 - - - - 0.981 0.711 - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
39. vgf ENSDARG00000105529 247 1.663 0.757 0.906 - - - - - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
40. MAP3K2 ENSDARG00000062884 34 1.65 - - - - - 0.868 0.782 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
41. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.635 - - - - - 0.834 0.801 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
42. ccdc24 ENSDARG00000038793 7 1.628 - - - - - 0.846 0.782 - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
43. ube2b ENSDARG00000026035 51 1.625 0.891 0.734 - - - - - - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
44. CR407704.1 CR407704.1 188 1.625 - - - - - 0.850 0.775 - -
45. med18 ENSDARG00000041237 247 1.621 - - - - - - 0.837 0.784 - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
46. FRMPD1 34 1.618 0.801 - - - - 0.817 - - - FERM and PDZ domain containing 1, transcript variant X3
47. TMEM55B_1 TMEM55B_1 495 1.616 - - - - - 0.729 0.887 - -
48. EML5 ENSDARG00000053517 74 1.616 - 0.807 - - - - 0.809 - - echinoderm microtubule associated protein like 5 [Source:HGNC Symbol;Acc:HGNC:18197]
49. CABZ01007222.1 CABZ01007222.1 78 1.614 - - - - - 0.864 0.750 - -
50. KCNJ3 KCNJ3 24 1.609 0.741 - - - - 0.868 - - -
51. dlgap3 ENSDARG00000055459 85 1.603 - - - - - 0.778 0.825 - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
52. si:dkey-271j15.3 ENSDARG00000091627 88 1.6 - - - - - 0.818 0.782 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
53. SMARCAD1 SMARCAD1 104 1.6 - - - - - 0.792 0.808 - -
54. rap2ip rap2ip 681 1.585 0.865 - - - - - 0.720 - -
55. MAP6 MAP6 643 1.583 - - - - - - 0.733 0.850 -
56. ccdc6b ENSDARG00000017595 828 1.582 - - - - - 0.759 0.823 - - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
57. plcxd3 ENSDARG00000054794 112 1.581 - - - - - 0.757 0.824 - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
58. elp4 ENSDARG00000008852 253 1.581 - - - - - 0.752 - 0.829 - elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
59. isl1 ENSDARG00000004023 981 1.579 0.834 0.745 - - - - - - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
60. plaub ENSDARG00000039145 35 1.575 - 0.729 - - - 0.846 - - - plasminogen activator, urokinase b [Source:ZFIN;Acc:ZDB-GENE-030619-15]
61. ZNF385C ENSDARG00000058154 478 1.573 - 0.746 - - - - 0.827 - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]
62. CDH12 CDH12 44 1.572 - 0.747 - - - - 0.825 - -
63. diras1a ENSDARG00000028066 126 1.571 0.754 - - - - - 0.817 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
64. si:dkey-208k4.1 si:dkey-208k4.1 15 1.57 - 0.747 - - - 0.823 - - -
65. si:ch211-66k16.20 si:ch211-66k16.20 162 1.569 0.796 - - - - 0.773 - - -
66. slc35g2b ENSDARG00000045447 378 1.568 - - - - - 0.767 0.801 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
67. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1.564 0.741 - - - - 0.823 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
68. sema3c ENSDARG00000034300 881 1.559 - 0.818 - - - - 0.741 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
69. otop2 ENSDARG00000006522 61 1.552 - 0.781 - - - 0.771 - - - otopetrin 2 [Source:ZFIN;Acc:ZDB-GENE-050104-2]
70. nrxn3b ENSDARG00000062693 192 1.549 - 0.721 - - - - 0.828 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
71. si:ch211-117c9.5 ENSDARG00000071235 154 1.548 - - - - - - 0.793 0.755 - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
72. dscama ENSDARG00000024865 75 1.546 - 0.712 - - - 0.834 - - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
73. efemp2b_1 ENSDARG00000020811 77 1.544 - 0.721 - - - 0.823 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
74. dclk2 dclk2 719 1.542 - - - - - 0.817 0.725 - -
75. map7d2b ENSDARG00000045316 702 1.533 - - - - - 0.775 0.758 - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
76. abcg4a ENSDARG00000061047 56 1.533 - - - - - 0.820 0.713 - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
77. atat1 ENSDARG00000004472 700 1.532 0.812 - - - - - - 0.720 - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
78. zgc:194665 ENSDARG00000004577 136 1.531 0.748 - - - - - 0.783 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
79. ankrd29 ENSDARG00000057159, ENSDARG00000112325 64 1.524 0.815 - - - - 0.709 - - - ankyrin repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-050208-655]
80. INSM2 ENSDARG00000020655 122 1.501 0.708 - - - - - 0.793 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
81. wu:fe38f03 wu:fe38f03 22 1.497 - 0.715 - - - - 0.782 - -
82. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.496 0.735 - - - - - 0.761 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
83. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 1.494 - 0.712 - - - - 0.782 - -
84. tbr1a ENSDARG00000076259 341 1.494 - 0.712 - - - - 0.782 - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
85. PRR12 PRR12 38 1.491 - - - - - 0.709 0.782 - -
86. prdm8 ENSDARG00000025017 370 1.489 - 0.708 - - - - 0.781 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
87. si:dkey-14d8.6 ENSDARG00000045835 72 1.484 - 0.747 - - - - 0.737 - - si:dkey-14d8.6 [Source:ZFIN;Acc:ZDB-GENE-041210-124]
88. GABRG1 ENSDARG00000101995 201 1.482 - 0.712 - - - - 0.770 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
89. syn2a ENSDARG00000045945 434 1.481 0.746 - - - - - 0.735 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
90. shisa7 shisa7 181 1.475 0.704 - - - - - 0.771 - -
91. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 1.471 - 0.747 - - - - 0.724 - - interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
92. ZNF337_5 ZNF337_5 48 1.462 0.741 - - - - 0.721 - - -
93. CASS4 ENSDARG00000006775 760 1.461 - 0.714 - - - - 0.747 - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
94. dld ENSDARG00000020219 4928 1.461 0.757 - - - - - 0.704 - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
95. ftr59 ENSDARG00000095864, ENSDARG00000116989 25 1.459 - 0.729 - - - 0.730 - - - finTRIM family, member 59 [Source:ZFIN;Acc:ZDB-GENE-090508-4]
96. tmem35 ENSDARG00000052567 5685 1.456 - - - - 0.728 - 0.728 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
97. CABZ01028287.1 CABZ01028287.1 626 1.447 - - - - - 0.720 0.727 - -
98. nphp4 ENSDARG00000069014 77 1.421 - 0.712 - - - - 0.709 - - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
99. chrna6 ENSDARG00000055559 60 1.412 - - - - - 0.702 0.710 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
100. CABZ01079979.1 CABZ01079979.1 1 1 - 1.000 - - - - - - -

There are 1678 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA