Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pvalb3

Gene Name Gene ID Reads Annotation
pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]










Genes with expression patterns similar to pvalb3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
2. ckma ENSDARG00000035327, ENSDARG00000114671 418792 4.696 - - 0.875 0.796 0.793 0.804 - 0.724 0.704 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
3. si:ch211-226o13.2 84923 4.685 - - 0.859 0.817 0.744 0.754 - 0.729 0.782 si:ch211-226o13.2
4. mylz3 ENSDARG00000017441 303597 4.598 - - 0.856 0.804 0.722 0.772 - 0.722 0.722 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
5. tnnt3a ENSDARG00000030270 112506 4.102 - - 0.830 0.845 - 0.816 - 0.785 0.826 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
6. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 3.993 - 0.802 - 0.810 - 0.920 - 0.702 0.759 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
7. tnnt3b ENSDARG00000068457 101827 3.969 - 0.904 0.815 0.790 0.732 - - 0.728 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
8. NRAP ENSDARG00000009341 3565 3.911 - 0.786 0.739 0.807 - 0.875 - 0.704 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
9. ryr1b ENSDARG00000023797 5693 3.865 0.892 0.768 0.702 - - - - 0.756 0.747 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
10. tnnt2d ENSDARG00000002988 7590 3.808 - 0.796 0.766 0.738 - 0.709 - - 0.799 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
11. zgc:158296 ENSDARG00000070923 3935 3.443 0.931 0.808 - - - 0.917 - - 0.787 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
12. smyd2b ENSDARG00000005629 8181 3.406 - 0.811 - - - 0.837 0.995 - 0.763 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
13. ckmb ENSDARG00000040565 505935 3.282 - - 0.844 0.845 - 0.798 - 0.795 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
14. SYNPO2L SYNPO2L 6697 3.275 - - 0.803 0.777 - 0.856 - - 0.839
15. mybpc2b ENSDARG00000021265 9618 3.257 - 0.816 0.849 0.822 - - - - 0.770 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
16. myl1 ENSDARG00000014196 98943 3.23 - - 0.858 0.725 - 0.869 - 0.778 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
17. mylpfb ENSDARG00000002589 70167 3.217 - 0.793 0.834 0.839 - 0.751 - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
18. eno3 ENSDARG00000039007 11355 3.205 0.985 0.789 0.711 0.720 - - - - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
19. myom1a ENSDARG00000061249 10230 3.198 - - 0.820 - - 0.894 - 0.721 0.763 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
20. EHBP1L1 EHBP1L1 2500 3.16 - 0.788 0.817 0.743 - 0.812 - - -
21. myhz1.3 ENSDARG00000067997 155509 3.152 - - 0.789 0.837 - 0.799 - 0.727 - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
22. si:ch211-32p8.1 si:ch211-32p8.1 3402 3.149 - 0.830 0.804 - - 0.805 - - 0.710
23. cap2 ENSDARG00000104478 3266 3.129 - 0.807 - - - 0.787 - 0.753 0.782 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
24. chrna1 ENSDARG00000009021 2931 3.122 - 0.768 - 0.738 - 0.840 - - 0.776 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
25. myoz1b ENSDARG00000071445 13381 3.096 - - 0.770 0.826 - - - 0.751 0.749 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
26. tgm2a ENSDARG00000070157 4516 3.082 - - 0.715 - 0.723 0.881 - - 0.763 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
27. tnni2a.4 ENSDARG00000029069 122344 3.076 - - 0.810 0.723 - - - 0.799 0.744 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
28. prx ENSDARG00000017246 6183 3.058 - 0.764 0.759 0.819 - - - - 0.716 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
29. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.042 - - 0.735 0.734 - 0.829 - - 0.744 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
30. MYOM2_1 MYOM2_1 4054 3.037 - - - 0.782 0.732 0.777 - - 0.746
31. apobec2a ENSDARG00000018881 4790 3.027 - 0.763 - 0.701 - - - 0.774 0.789 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
32. mdh1b ENSDARG00000018008 3196 3.025 - - 0.775 0.704 - 0.741 - - 0.805 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
33. BX294434.1 ENSDARG00000061272 6493 3.015 - 0.827 0.753 0.723 - - - - 0.712 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
34. ATP5J_2 ATP5J_2 2381 2.996 - 0.723 - - - 0.808 - 0.736 0.729
35. sncga ENSDARG00000034423, ENSDARG00000112260 5469 2.984 - 0.794 - - - 0.714 - 0.704 0.772 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
36. jph2 ENSDARG00000028625 6706 2.978 - - - 0.718 0.763 0.748 - - 0.749 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
37. kif21a ENSDARG00000061131 913 2.953 - 0.717 0.775 0.745 - 0.716 - - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
38. tnni1al 8272 2.599 - - - - - - 0.998 0.802 0.799 troponin I, skeletal, slow like, transcript variant X1
39. DNAJA4 ENSDARG00000051762 5657 2.55 0.912 0.824 - - - 0.814 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
40. mybpc3 ENSDARG00000011615 7271 2.546 - - - - 0.719 - 0.991 - 0.836 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
41. SYNPO2 SYNPO2 7382 2.537 - - 0.831 - - 0.918 - - 0.788
42. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 2.516 0.985 0.761 - - - 0.770 - - - UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]
43. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.484 - - 0.841 - - 0.867 - 0.776 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
44. pygmb ENSDARG00000013317 5454 2.48 0.982 0.708 - - - - - - 0.790 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
45. mybphb ENSDARG00000003081 5208 2.477 0.972 0.801 - - - - - - 0.704 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
46. txlnbb ENSDARG00000076241 6396 2.467 - 0.838 - - - 0.894 - - 0.735 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
47. murca murca 6614 2.464 - - 0.853 - - 0.836 - - 0.775
48. tmod4 ENSDARG00000020890 17436 2.453 - - 0.849 0.818 - - - - 0.786 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
49. PTPLA PTPLA 4044 2.44 - 0.888 - - - 0.807 - 0.745 -
50. tnni2b.1 ENSDARG00000035958 51597 2.439 - - 0.732 - - - 0.923 0.784 - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
51. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.427 - - - - - 0.902 - 0.720 0.805 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
52. sucla2 ENSDARG00000005359 5992 2.423 - - - - - 0.851 - 0.762 0.810 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
53. ttnb ttnb 73721 2.421 - - 0.758 0.787 - 0.876 - - -
54. rp42-pen rp42-pen 3395 2.421 - 0.850 - - - 0.804 - - 0.767
55. ptrfa ptrfa 4363 2.417 - 0.764 - 0.739 - 0.914 - - -
56. jph1a ENSDARG00000058603 2852 2.416 - 0.800 - 0.721 - 0.895 - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
57. atp2a1 ENSDARG00000020574 291561 2.41 - - 0.861 0.781 - 0.768 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
58. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.391 - - 0.794 0.850 - - - 0.747 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
59. eef2l2 ENSDARG00000035256 6815 2.39 - 0.849 0.810 0.731 - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
60. myod1 ENSDARG00000030110 6019 2.389 - 0.839 - - - 0.840 - - 0.710 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
61. hhatla ENSDARG00000039051 6598 2.384 - 0.861 - 0.772 - - - - 0.751 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
62. IGFN1 IGFN1 5030 2.383 - 0.796 - - - - - 0.784 0.803
63. AIMP1 ENSDARG00000060036 4136 2.377 - 0.819 - - - 0.838 - - 0.720 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
64. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 2.376 - - 0.769 - 0.743 0.864 - - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
65. vcl vcl 6667 2.37 - 0.748 0.828 - - - - - 0.794
66. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.365 - 0.820 - 0.810 - - - - 0.735 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
67. casq1b ENSDARG00000018105 2643 2.359 - 0.879 - - 0.736 - - - 0.744 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
68. klhl31 ENSDARG00000039066 13656 2.344 - - 0.756 - - - - 0.724 0.864 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
69. srl ENSDARG00000104587 11126 2.314 - 0.787 0.823 0.704 - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
70. rtn2b ENSDARG00000057027 1391 2.302 - - - 0.792 - 0.803 - - 0.707 reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
71. trdn ENSDARG00000041779 4283 2.301 - 0.706 0.803 - - 0.792 - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
72. tnnc1b ENSDARG00000037539 13945 2.292 - 0.785 - - - 0.779 - - 0.728 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
73. acsl1 acsl1 4216 2.285 - - 0.723 0.758 - 0.804 - - -
74. cfl2 ENSDARG00000014106 8051 2.262 - 0.738 0.811 0.713 - - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
75. znf648 ENSDARG00000104823 1918 2.258 - 0.750 - 0.719 - 0.789 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
76. CR847973.1 ENSDARG00000115516 8754 2.228 - - - 0.705 - 0.816 - - 0.707
77. smyd1b ENSDARG00000091253 4964 2.227 - 0.773 - - - 0.736 - - 0.718 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
78. CABZ01079764.1 CABZ01079764.1 12103 2.218 - 0.787 - 0.705 - 0.726 - - -
79. psmb1 ENSDARG00000009640 8628 1.941 0.949 - - - - - 0.992 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
80. zgc:66479 ENSDARG00000008732 3347 1.813 0.979 0.834 - - - - - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
81. dtnba ENSDARG00000077694 5483 1.807 - 0.890 - - - 0.917 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
82. vbp1 ENSDARG00000030241 10619 1.793 - 0.798 - - - - 0.995 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
83. farsa ENSDARG00000098825 2813 1.774 0.978 0.796 - - - - - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
84. si:dkey-10f21.16 si:dkey-10f21.16 252 1.761 0.973 0.788 - - - - - - -
85. f11r f11r 16668 1.752 0.802 - - - - - 0.950 - -
86. sptb ENSDARG00000030490 7128 1.739 - 0.847 - - - 0.892 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
87. CU463857.1 CU463857.1 5541 1.738 - - - - - 0.922 - 0.816 -
88. ryr3 ENSDARG00000071331 6795 1.738 - 0.819 - - - 0.919 - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
89. wu:fq41a10 wu:fq41a10 7009 1.716 0.902 0.814 - - - - - - -
90. nexn ENSDARG00000057317 10972 1.715 - - - - - 0.884 - - 0.831 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
91. CR392006.1 CR392006.1 1401 1.697 - 0.772 - - - 0.925 - - -
92. zgc:66448 ENSDARG00000022952 1045 1.695 0.973 0.722 - - - - - - - zgc:66448 [Source:ZFIN;Acc:ZDB-GENE-030131-5612]
93. smpx ENSDARG00000045302 2175 1.693 - - - - - 0.888 - - 0.805 small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
94. stac3 ENSDARG00000098883 1765 1.691 - 0.784 - - - 0.907 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
95. myhc4 ENSDARG00000035438 1322 1.691 - 0.788 - - - 0.903 - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
96. col27a1a 1747 1.687 0.982 - - - - 0.705 - - - collagen, type XXVII, alpha 1a
97. CR450814.3 CR450814.3 608 1.685 - 0.775 - - - 0.910 - - -
98. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.679 0.967 0.712 - - - - - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
99. klhl41b ENSDARG00000006757 10762 1.67 - - - - - 0.859 - - 0.811 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
100. calm1b ENSDARG00000034187 13158 1.668 - - 0.782 - - 0.886 - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]

There are 1111 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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