Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pum1

Gene Name Gene ID Reads Annotation
pum1 ENSDARG00000099256 5017 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]










Genes with expression patterns similar to pum1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pum1 ENSDARG00000099256 5017 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
2. lypla2 ENSDARG00000053656 8971 4.664 - 0.759 0.900 - 0.722 0.702 0.842 - 0.739 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
3. tmem2 2572 3.246 - - 0.885 - - 0.756 0.815 0.790 - transmembrane protein 2, transcript variant X1
4. palm1b ENSDARG00000007818 2128 3.09 - 0.728 - - - 0.716 0.786 0.860 - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
5. eif4h ENSDARG00000042252 6742 3.079 - - 0.854 - - 0.819 0.700 - 0.706 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
6. sf1 ENSDARG00000008188 5142 3.058 - - - - - 0.794 0.722 0.812 0.730 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
7. tfap4 ENSDARG00000103923 2203 2.483 - 0.778 0.909 - - - 0.796 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
8. SERBP1 SERBP1 9276 2.467 - - 0.913 - - 0.758 0.796 - -
9. xpo1b ENSDARG00000063229 2529 2.435 - - 0.888 - - 0.738 - 0.809 - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
10. crkl ENSDARG00000028699 2966 2.432 - - 0.869 - - - 0.756 0.807 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
11. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.418 - - 0.923 - - - 0.775 - 0.720 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
12. kdm5c ENSDARG00000006124 4389 2.416 - 0.734 0.914 - - 0.768 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
13. rbm25 rbm25 3629 2.415 - - 0.926 - - - 0.736 - 0.753
14. sp4 ENSDARG00000005186 2904 2.411 - 0.795 - - - - 0.895 - 0.721 sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
15. dnajc5ab ENSDARG00000004836 2923 2.394 - 0.805 0.864 - - - - - 0.725 DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
16. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 2.38 - - - - - 0.743 0.800 0.837 - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
17. puf60a ENSDARG00000032175 5618 2.374 - 0.788 - - - - 0.803 - 0.783 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
18. ttk ENSDARG00000041361 3911 2.355 - 0.708 0.842 - - - 0.805 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
19. plcg1 ENSDARG00000038442 5324 2.331 - - - - - 0.851 0.725 0.755 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
20. ubl3b ENSDARG00000021556 1210 2.307 - - 0.855 - - 0.707 0.745 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
21. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.307 - 0.814 - - - - 0.775 0.718 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
22. clk2a ENSDARG00000062954 1890 2.296 - 0.727 0.857 - - 0.712 - - - CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
23. asna1 ENSDARG00000018190 5253 2.292 - - - - - 0.791 0.769 0.732 - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
24. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.265 - - 0.816 - - 0.711 - - 0.738 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
25. golga7 ENSDARG00000057676 4691 2.263 - - - - - 0.774 0.782 - 0.707 golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
26. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 2.259 - - - - - 0.760 0.725 0.774 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
27. nxf1 ENSDARG00000055076 3251 2.251 - - - - - 0.795 0.749 - 0.707 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
28. znf827 ENSDARG00000076171 6304 2.243 - 0.707 - - - 0.767 - - 0.769 zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
29. rbms3 ENSDARG00000044574 2514 2.239 - - - - - 0.732 0.735 - 0.772 RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
30. eif2s1a ENSDARG00000005827 5992 2.221 - 0.790 - - - - 0.716 - 0.715 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
31. ap1s1 ENSDARG00000056803 3854 2.22 - 0.709 - - - 0.758 - 0.753 - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
32. kdm1a ENSDARG00000060679 6152 2.22 - 0.765 - - - - 0.730 0.725 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
33. smc1al ENSDARG00000058203 8838 2.219 - - - - - 0.796 0.719 - 0.704 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
34. GATAD2B ENSDARG00000005834 3855 2.215 - - - - - 0.776 0.723 - 0.716 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
35. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.208 - - - - - 0.762 - 0.724 0.722 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
36. uba1 ENSDARG00000037559 11579 2.206 - - - - 0.736 0.707 0.763 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
37. si:ch211-173p18.3 ENSDARG00000035821 1917 2.2 - 0.702 - - - 0.778 - - 0.720 si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
38. znf319 znf319 3027 2.2 - - - - - 0.736 0.713 - 0.751
39. ctbp2 ctbp2 3255 2.192 - 0.719 - - - 0.744 0.729 - -
40. myo1b ENSDARG00000024694 1761 2.192 - 0.717 - - - 0.773 0.702 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
41. fam53b ENSDARG00000016156 2143 2.178 - 0.723 - 0.728 - 0.727 - - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
42. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 2.168 - - - - - 0.716 0.740 - 0.712 COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
43. LGR4 ENSDARG00000060542 1222 2.161 - 0.708 - - - - 0.731 0.722 - leucine-rich repeat containing G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-111013-1]
44. dcps ENSDARG00000009862 571 2.16 0.735 0.706 - - - - 0.719 - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
45. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.76 - - - - - 0.879 0.881 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
46. cand1 ENSDARG00000017841 8164 1.75 - - 0.901 - - 0.849 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
47. hnrnpk ENSDARG00000018914 8841 1.749 - - 0.885 - - - 0.864 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
48. lin7c ENSDARG00000027322 3083 1.733 - 0.837 - - - - - 0.896 - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
49. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.71 - - 0.870 - - - - 0.840 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
50. adcy7 ENSDARG00000060070 1878 1.708 - 0.888 - - - - 0.820 - - adenylate cyclase 7 [Source:ZFIN;Acc:ZDB-GENE-040713-1]
51. akirin2 ENSDARG00000058729 13245 1.703 - - - - - 0.851 0.852 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
52. C10H11orf30 C10H11orf30 1982 1.701 - - 0.888 - - - 0.813 - -
53. sdc4 ENSDARG00000059906 10105 1.691 - - 0.908 - - - 0.783 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
54. safb ENSDARG00000020467 5608 1.687 - - 0.909 - - - - - 0.778 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
55. luc7l ENSDARG00000055903 3357 1.684 - 0.798 0.886 - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
56. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.683 - 0.831 - - - - 0.852 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
57. mgaa ENSDARG00000078784 1344 1.676 - - 0.888 - - - - 0.788 - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
58. ddx27 ENSDARG00000091831 1471 1.674 - - 0.898 - - - - 0.776 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
59. rpl7l1 ENSDARG00000042864 3256 1.674 - - 0.872 - - - - 0.802 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
60. hexim1 ENSDARG00000036482 4317 1.673 - - 0.885 - - - 0.788 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
61. nr1h3 ENSDARG00000098439 859 1.67 - - 0.854 - - - - 0.816 - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
62. nucks1a ENSDARG00000078473 28285 1.659 - 0.888 - - - 0.771 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
63. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.654 - - 0.847 - - - 0.807 - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
64. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.651 - - 0.876 - - 0.775 - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
65. axin2 ENSDARG00000100149 4223 1.648 - - 0.911 - - - - 0.737 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
66. itga5 ENSDARG00000006353 1876 1.645 - 0.895 - - - - 0.750 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
67. Sep-02 Sep-02 10074 1.643 - - - - - 0.824 0.819 - -
68. kri1 ENSDARG00000075380 1463 1.641 - 0.744 0.897 - - - - - - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
69. pbx2 ENSDARG00000019717 6892 1.638 - - 0.825 - - - 0.813 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
70. ube4b ENSDARG00000037017 8012 1.637 - - 0.897 - - - 0.740 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
71. dek ENSDARG00000070108 2262 1.635 - 0.794 - - - - - 0.841 - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
72. si:ch211-161h7.4 ENSDARG00000087238 4399 1.633 - - 0.885 - - - - - 0.748 si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
73. sumo3a ENSDARG00000028119 13447 1.632 - - - - - 0.809 0.823 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
74. ctsf ENSDARG00000063095 4564 1.632 - 0.779 0.853 - - - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
75. nusap1 ENSDARG00000002403 6953 1.632 - - 0.889 - - 0.743 - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
76. BRK1 ENSDARG00000041974 6430 1.631 - - 0.845 - - 0.786 - - - BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
77. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.631 - - - - - - 0.819 0.812 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
78. snx12 ENSDARG00000019060 9563 1.63 - - 0.891 - - - 0.739 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
79. mrpl37 ENSDARG00000062916 1600 1.629 - 0.771 0.858 - - - - - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
80. rac1 rac1 7341 1.626 - - - - - 0.852 0.774 - -
81. zswim5 ENSDARG00000055900 4243 1.625 - - 0.918 - - - - - 0.707 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
82. fen1 ENSDARG00000011404 3358 1.623 - 0.863 - - - - 0.760 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
83. polr2d ENSDARG00000076509 3386 1.622 - - 0.877 - - - 0.745 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
84. cdk11b ENSDARG00000102546 1579 1.622 0.749 - 0.873 - - - - - - cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
85. rnf10 ENSDARG00000079687 6768 1.621 - - 0.877 - - - - - 0.744 ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
86. vps35 ENSDARG00000008224 13245 1.62 - - - - - 0.812 0.808 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
87. etf1 etf1 12861 1.619 0.724 - 0.895 - - - - - -
88. ash2l ENSDARG00000060392 4916 1.618 - 0.843 - - - - 0.775 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
89. tial1 ENSDARG00000009525 1856 1.618 - - 0.877 - - - - - 0.741 TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
90. tnfaip3 ENSDARG00000027777 1066 1.616 - - 0.856 - - - - - 0.760 tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
91. ilk ENSDARG00000056964 6686 1.616 - 0.877 - - - - 0.739 - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
92. arpp19b ENSDARG00000039880 4823 1.614 - - - - - - 0.880 - 0.734 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
93. sltm ENSDARG00000052728 6234 1.609 - - 0.906 - - - 0.703 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
94. pcsk5b ENSDARG00000060518 883 1.608 - 0.812 - - - - - 0.796 - proprotein convertase subtilisin/kexin type 5b [Source:ZFIN;Acc:ZDB-GENE-070822-7]
95. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.607 - - - - - 0.881 - - 0.726 nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
96. GIGYF1_1 GIGYF1_1 1865 1.607 - - 0.906 - - - - - 0.701
97. ARHGAP22 ENSDARG00000076434 1406 1.607 - - 0.879 - - - - - 0.728 Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
98. sipa1l2 ENSDARG00000061640 4545 1.607 - - 0.900 - - 0.707 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
99. twist1a ENSDARG00000030402 3748 1.606 - 0.884 - - - - 0.722 - - twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6]
100. htatsf1 ENSDARG00000056649 2018 1.604 - 0.712 0.892 - - - - - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]

There are 1917 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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