Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for puf60b

Gene Name Gene ID Reads Annotation
puf60b ENSDARG00000001241 13827 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]










Genes with expression patterns similar to puf60b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. puf60b ENSDARG00000001241 13827 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
2. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 3.676 0.704 - - 0.710 0.837 0.710 - - 0.715 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
3. MKI67 ENSDARG00000091150 11038 3.17 - - - 0.710 - 0.745 - 0.872 0.843 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
4. myef2 ENSDARG00000059398 6050 3.037 - - - 0.741 - 0.702 - 0.888 0.706 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
5. hdac1 ENSDARG00000015427 19804 2.567 - - - - - 0.837 0.993 - 0.737 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
6. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.543 - - - - - 0.805 - 0.819 0.919 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
7. hmgb3a ENSDARG00000056725 15668 2.516 - - - - - 0.737 - 0.945 0.834 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
8. snrpf ENSDARG00000105037 10241 2.501 - - 0.941 0.783 - 0.777 - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
9. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.474 - 0.712 0.919 - - - - - 0.843 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
10. srsf2a ENSDARG00000057484 25721 2.473 - - 0.969 0.736 - - - - 0.768 serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
11. bri3bp ENSDARG00000010108 6295 2.469 - - - - - 0.804 - 0.823 0.842 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
12. tead1a ENSDARG00000028159 3574 2.457 - - - - 0.755 0.801 - 0.901 - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
13. lfng ENSDARG00000037879 11783 2.453 - 0.785 - 0.805 - - - - 0.863 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
14. sumo3a ENSDARG00000028119 13447 2.438 - - - 0.772 - 0.779 - - 0.887 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
15. rrm1 ENSDARG00000014017 7296 2.421 - 0.760 - - - - - 0.820 0.841 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
16. ppm1g ENSDARG00000075559 6516 2.416 - - - 0.755 0.781 - - 0.880 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
17. plcg1 ENSDARG00000038442 5324 2.41 - - - - 0.731 0.851 - - 0.828 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
18. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 2.409 0.803 - - - - 0.776 - 0.830 - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
19. ilf2 ENSDARG00000014591 14543 2.407 - - - 0.728 0.824 - - - 0.855 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
20. marcksl1b ENSDARG00000035715 37390 2.395 0.717 - - - - - - 0.816 0.862 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
21. celf1 ENSDARG00000005315 5598 2.368 - 0.735 - - - 0.773 - 0.860 - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
22. setbp1 ENSDARG00000093799 4499 2.366 - - - 0.725 - 0.728 - 0.913 - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
23. sipa1l2 ENSDARG00000061640 4545 2.364 - - - - 0.746 0.701 - 0.917 - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
24. arid1aa ENSDARG00000101710 3644 2.349 - - - - 0.841 0.762 - - 0.746 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
25. ccne2 ENSDARG00000098529 4695 2.337 - - - 0.728 0.755 - - 0.854 - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
26. znf319 znf319 3027 2.333 - - - - - 0.702 - 0.927 0.704
27. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.33 - - - 0.740 0.778 - - - 0.812 meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
28. TAF15 ENSDARG00000070019 5102 2.323 - - - 0.703 - 0.827 - - 0.793 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
29. MAP4K4 ENSDARG00000098670 4665 2.314 - - - 0.786 - 0.769 - - 0.759 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
30. srsf6b ENSDARG00000016783 9926 2.304 - - - 0.750 - 0.754 - - 0.800 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
31. smarcd1 ENSDARG00000019004 6028 2.3 - - - 0.793 - 0.731 - - 0.776 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
32. hnrpl 6412 2.288 - - - - 0.709 0.711 - - 0.868 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
33. lmnb2 ENSDARG00000101624 11304 2.271 - - - 0.726 - 0.709 - - 0.836 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
34. hdgfrp2 7462 2.231 - 0.708 - - - 0.713 - - 0.810 hepatoma-derived growth factor-related protein 2, transcript variant X1
35. si:ch73-46j18.5 ENSDARG00000092467 6002 2.231 - 0.723 - - 0.743 - - - 0.765 si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
36. bcl11ab ENSDARG00000063153 3032 2.187 - - - 0.727 - 0.704 - - 0.756 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
37. rbm25 rbm25 3629 2.187 - 0.724 - - - 0.728 - - 0.735
38. znf865 ENSDARG00000036698 15532 2.187 - 0.710 - 0.768 - 0.709 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
39. tfdp2 ENSDARG00000042835 1985 2.179 - - - 0.712 - 0.718 - - 0.749 transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
40. ddx39ab ENSDARG00000015111 11619 2.168 - - - 0.732 - 0.728 - - 0.708 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
41. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.116 - - - 0.701 - 0.711 - - 0.704 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
42. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.836 - - 0.888 - - - - 0.948 - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
43. ebf3 ebf3 4238 1.769 - - - - - - - 0.957 0.812
44. wdr33 ENSDARG00000018272 4076 1.755 - - - - - - 0.996 - 0.759 WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
45. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.753 - - - - - - - 0.910 0.843 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
46. NRD1 NRD1 3486 1.744 - - - - 0.748 - 0.996 - -
47. yars ENSDARG00000035913, ENSDARG00000113430 2043 1.744 - 0.749 - - - - 0.995 - - tyrosyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030425-2]
48. ube2d1b ENSDARG00000038576 5971 1.736 - - - - - - 0.998 - 0.738 ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
49. nop56 ENSDARG00000012820 15231 1.733 - 0.748 - - - - 0.985 - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
50. ogdha ENSDARG00000034270 10334 1.733 - 0.762 0.971 - - - - - - oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]
51. fam32al fam32al 5716 1.732 - 0.737 - - - - 0.995 - -
52. atp6v1e1b ENSDARG00000030694 5452 1.727 - - - - - 0.877 - 0.850 - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
53. emc3 ENSDARG00000020607 3406 1.726 - - - - - - - 0.931 0.795 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
54. ndnl2 ENSDARG00000058212 1042 1.721 - 0.786 - - - - - 0.935 - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
55. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.72 - - - - - - 0.996 0.724 - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
56. sdad1 ENSDARG00000105117 2819 1.719 - - 0.949 - 0.770 - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
57. ncalda ENSDARG00000070688 5069 1.717 - - - - - - - 0.956 0.761 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
58. sox9b ENSDARG00000043923 5375 1.716 - - - - - - 0.984 - 0.732 SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
59. fubp1 ENSDARG00000029248 15259 1.708 - - 0.944 0.764 - - - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
60. si:rp71-45k5.4 ENSDARG00000035679 10411 1.707 - - 0.966 - - 0.741 - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
61. etf1 etf1 12861 1.707 - - - 0.721 - - 0.986 - -
62. psmb6 ENSDARG00000002240 8015 1.705 - - - - - - 0.995 - 0.710 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
63. dido1 ENSDARG00000057940 3819 1.704 - - - - - - - 0.901 0.803 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
64. top2a ENSDARG00000024488 4273 1.703 - - - - - - - 0.959 0.744 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
65. samm50 ENSDARG00000045814 4511 1.702 - - - - - - 0.996 0.706 - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
66. khsrp ENSDARG00000026489 15738 1.7 - - - - - 0.819 - - 0.881 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
67. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.691 - - - - - 0.857 - - 0.834 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
68. carm1 ENSDARG00000018698 5599 1.69 - - - 0.784 - - - - 0.906 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
69. FP016176.1 FP016176.1 7030 1.69 - - - - 0.830 - - - 0.860
70. ddah2 ENSDARG00000105009 4570 1.689 - - 0.949 - - 0.740 - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
71. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.683 - - - - - 0.837 - 0.846 - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
72. Sep-06 Sep-06 5465 1.678 - 0.734 - - - - - 0.944 -
73. dock7 ENSDARG00000078675 1995 1.674 - - - - - - - 0.949 0.725 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
74. ctnnbip1 ENSDARG00000038954 2519 1.673 - - - - - - - 0.910 0.763 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
75. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.671 - - - 0.854 - - - - 0.817 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
76. vdac1 ENSDARG00000045132 8051 1.67 - - - - - 0.799 - - 0.871 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
77. AP3B2 1874 1.668 - - - - - - - 0.954 0.714 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
78. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.665 - 0.717 0.948 - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
79. GATAD2B ENSDARG00000005834 3855 1.661 - - - - - - - 0.941 0.720 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
80. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.659 - - - - - - - 0.929 0.730 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
81. psmd11a ENSDARG00000060150 4529 1.658 - - 0.950 - - - - - 0.708 proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
82. hnrnpm ENSDARG00000061735 19428 1.655 - - - 0.802 - - - - 0.853 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
83. tubb5 ENSDARG00000037997 18691 1.65 - - - 0.707 - - - 0.943 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
84. cdca7a ENSDARG00000077620 9345 1.645 - - 0.935 0.710 - - - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
85. sarnp ENSDARG00000059357 4768 1.645 - - - - - 0.893 - - 0.752 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
86. rps4x ENSDARG00000014690 88322 1.642 - - 0.801 - - - 0.841 - - ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
87. rpl14 ENSDARG00000103433 69914 1.641 - - 0.779 - 0.862 - - - - ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
88. clasp2 ENSDARG00000020345 3382 1.639 - - - 0.703 - - - 0.936 - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
89. dnaja2l ENSDARG00000010745 2367 1.632 - - - - - - - 0.886 0.746 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
90. cul3a ENSDARG00000038967 6155 1.628 - - - - - - - 0.854 0.774 cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
91. si:dkey-19e4.5 ENSDARG00000089886 2562 1.626 - - - - - 0.836 - - 0.790 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
92. hnrnpab hnrnpab 72354 1.617 - - 0.800 - - 0.817 - - -
93. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.617 - - - 0.704 - - - 0.913 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
94. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.617 - - - - - - - 0.915 0.702 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
95. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.613 - - - - - - - 0.902 0.711 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
96. calr ENSDARG00000076290 13987 1.613 - - 0.846 - - 0.767 - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
97. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.61 - - - - - - - 0.908 0.702 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
98. IM:7163548 IM:7163548 6540 1.609 - - - - - 0.829 - 0.780 -
99. slc25a3b ENSDARG00000025566 32264 1.603 - - - - - - 0.806 0.797 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
100. eif3f ENSDARG00000077533 24387 1.602 - - 0.900 - - - - - 0.702 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]

There are 1301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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