Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptx4

Gene Name Gene ID Reads Annotation
ptx4 ENSDARG00000038072 2 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]










Genes with expression patterns similar to ptx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptx4 ENSDARG00000038072 2 3 - - - 1.000 - - - 1.000 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
2. clec3ba ENSDARG00000076541 3 2 - - - - - - - 1.000 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
3. si:dkey-82i20.3 si:dkey-82i20.3 6 1.973 - - - 0.973 - - - - 1.000
4. slc1a9 ENSDARG00000098269 12 1 - - - - - - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
5. SEMA4F ENSDARG00000100308 1 1 - - - - - - - - 1.000 ssemaphorin 4F [Source:HGNC Symbol;Acc:HGNC:10734]
6. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
7. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
8. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
9. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
10. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
11. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
12. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
13. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
14. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
15. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
16. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
17. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
18. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
19. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
20. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
21. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
22. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
23. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
24. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
25. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
26. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
27. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
28. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
29. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
30. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
31. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
32. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
33. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
34. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
35. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
36. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
37. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
38. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
39. shank3a ENSDARG00000063332 5 1 - - - - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
40. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
41. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
42. si:ch211-250k18.8_1 2 1 - - - - - - - 1.000 - si:ch211-250k18.8
43. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
44. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
45. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
46. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
47. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
48. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
49. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
50. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
51. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
52. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
53. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
54. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
55. BX546499.1 ENSDARG00000092602 1 1 - - - - - - - - 1.000
56. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
57. CABZ01079979.1 CABZ01079979.1 1 1 - - - - - - - 1.000 -
58. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
59. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
60. htr5al htr5al 6 1 - - - - - - - - 1.000
61. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
62. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
63. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
64. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
65. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
66. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
67. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
68. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
69. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - - - - - - - - 1.000
70. si:dkey-261j4.3 ENSDARG00000035151 156 1 - - - - - - - 1.000 - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
71. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
72. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
73. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
74. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
75. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
76. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
77. EPM2AIP1 EPM2AIP1 4 1 - - - - - - - - 1.000
78. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
79. rock2b_1 ENSDARG00000004877, ENSDARG00000096433 0 1 - - - - - - - 1.000 - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
80. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
81. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
82. rom1b ENSDARG00000026926 4 1 - - - - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
83. FAM46D FAM46D 0 1 - - - - - - - - 1.000
84. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
85. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
86. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
87. TMPRSS7 5 1 - - - - - - - - 1.000 transmembrane protease, serine 7
88. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
89. psmb11 psmb11 5 1 - - - - - - - 1.000 -
90. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
91. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
92. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
93. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
94. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
95. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
96. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
97. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
98. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
99. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
100. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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