Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptx4

Gene Name Gene ID Reads Annotation
ptx4 ENSDARG00000038072 2 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]










Genes with expression patterns similar to ptx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptx4 ENSDARG00000038072 2 3 - - - 1.000 - - - 1.000 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
2. clec3ba ENSDARG00000076541 3 2 - - - - - - - 1.000 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
3. si:dkey-82i20.3 si:dkey-82i20.3 6 1.973 - - - 0.973 - - - - 1.000
4. psmb11 psmb11 5 1 - - - - - - - 1.000 -
5. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
6. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
7. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - - - 1.000 - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
8. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
9. rom1b ENSDARG00000026926 4 1 - - - - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
10. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
11. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
12. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
13. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
14. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
15. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
16. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
17. si:dkey-15h8.3 si:dkey-15h8.3 0 1 - - - - - - - 1.000 -
18. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
19. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
20. shank3a ENSDARG00000063332 5 1 - - - - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
21. si:ch211-250k18.8_1 2 1 - - - - - - - 1.000 - si:ch211-250k18.8
22. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
23. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
24. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
25. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
26. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
27. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
28. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
29. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
30. NPM2 NPM2 41 1 - - - - - - - - 1.000
31. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
32. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
33. CABZ01079979.1 CABZ01079979.1 1 1 - - - - - - - 1.000 -
34. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
35. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
36. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
37. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
38. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
39. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
40. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
41. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
42. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
43. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
44. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
45. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
46. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
47. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
48. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
49. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
50. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
51. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
52. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
53. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
54. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
55. UIMC1 200 1 - - - - - - - 1.000 - ubiquitin interaction motif containing 1
56. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
57. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
58. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
59. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
60. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
61. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
62. TDRD6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
63. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
64. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
65. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
66. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
67. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
68. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
69. GLRA2 ENSDARG00000075012, ENSDARG00000114839 0 1 - - - - - - - - 1.000 glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]
70. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
71. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
72. htr5al htr5al 6 1 - - - - - - - - 1.000
73. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
74. MEI1 MEI1 2 1 - - - - - - - - 1.000
75. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
76. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
77. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
78. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
79. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
80. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
81. GGT5 GGT5 1 1 - - - - - - - - 1.000
82. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
83. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
84. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
85. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
86. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
87. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
88. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
89. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - 1.000 - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
90. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
91. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
92. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
93. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
94. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
95. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
96. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
97. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
98. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
99. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
100. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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