Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptx4

Gene Name Gene ID Reads Annotation
ptx4 ENSDARG00000038072 2 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]










Genes with expression patterns similar to ptx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptx4 ENSDARG00000038072 2 3 - - - 1.000 - - - 1.000 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
2. clec3ba ENSDARG00000076541 3 2 - - - - - - - 1.000 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
3. si:dkey-82i20.3 si:dkey-82i20.3 6 1.973 - - - 0.973 - - - - 1.000
4. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
5. apba1a ENSDARG00000103848 0 1 - - - - - - - - 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
6. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
7. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
8. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
9. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - - - 1.000 -
10. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
11. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
12. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
13. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
14. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
15. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
16. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
17. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
18. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
19. org ENSDARG00000076474 16 1 - - - - - - - - 1.000 oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
20. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
21. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
22. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
23. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
24. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
25. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
26. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
27. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
28. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
29. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - - - 1.000
30. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
31. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
32. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
33. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
34. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
35. zbtb32 ENSDARG00000073726 1 1 - - - - - - - 1.000 - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
36. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
37. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
38. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
39. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
40. rom1b ENSDARG00000026926 4 1 - - - - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
41. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
42. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
43. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
44. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
45. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
46. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
47. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
48. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
49. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
50. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
51. CABZ01079979.1 CABZ01079979.1 1 1 - - - - - - - 1.000 -
52. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
53. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
54. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
55. DSEL DSEL 1 1 - - - - - - - - 1.000
56. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
57. tirap ENSDARG00000074371 10 1 - - - - - - - 1.000 - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
58. psmb11 psmb11 5 1 - - - - - - - 1.000 -
59. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
60. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
61. htr5al htr5al 6 1 - - - - - - - - 1.000
62. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
63. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
64. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
65. FAM46D FAM46D 0 1 - - - - - - - - 1.000
66. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
67. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
68. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
69. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
70. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
71. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
72. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
73. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
74. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
75. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
76. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
77. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
78. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
79. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
80. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
81. ppid_1 ENSDARG00000038835 4 1 - - - - - - - - 1.000 peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
82. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
83. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
84. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
85. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
86. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
87. MEI1 MEI1 2 1 - - - - - - - - 1.000
88. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
89. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
90. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
91. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
92. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
93. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
94. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
95. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
96. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
97. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
98. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
99. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
100. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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