Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptx4

Gene Name Gene ID Reads Annotation
ptx4 ENSDARG00000038072 2 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]










Genes with expression patterns similar to ptx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptx4 ENSDARG00000038072 2 3 - - - 1.000 - - - 1.000 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
2. clec3ba ENSDARG00000076541 3 2 - - - - - - - 1.000 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
3. si:dkey-82i20.3 si:dkey-82i20.3 6 1.973 - - - 0.973 - - - - 1.000
4. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
5. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
6. GLRA2 ENSDARG00000075012, ENSDARG00000114839 0 1 - - - - - - - - 1.000 glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]
7. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
8. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - - - 1.000 -
9. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
10. psmb11 psmb11 5 1 - - - - - - - 1.000 -
11. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
12. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
13. TDRD6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
14. rock2b_1 ENSDARG00000004877, ENSDARG00000096433 0 1 - - - - - - - 1.000 - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
15. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
16. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - - - - 1.000
17. GPT GPT 2 1 - - - - - - - - 1.000
18. FP103003.1_1 FP103003.1_1 6 1 - - - - - - - - 1.000
19. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
20. si:dkey-261j4.3 ENSDARG00000035151 156 1 - - - - - - - 1.000 - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
21. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - - - 1.000 -
22. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
23. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
24. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
25. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000
26. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
27. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
28. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
29. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
30. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
31. NPM2 NPM2 41 1 - - - - - - - - 1.000
32. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
33. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
34. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
35. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
36. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
37. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
38. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
39. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
40. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
41. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
42. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
43. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
44. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
45. rom1b ENSDARG00000026926 4 1 - - - - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
46. grin2cb ENSDARG00000077560 9 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
47. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
48. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
49. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - - - - 1.000 -
50. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
51. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
52. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
53. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
54. zbtb32 ENSDARG00000073726 1 1 - - - - - - - 1.000 - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
55. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
56. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
57. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
58. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
59. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
60. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
61. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
62. CABZ01078515.1 CABZ01078515.1 25 1 - - - - - - - 1.000 -
63. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
64. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
65. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
66. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
67. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
68. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
69. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
70. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
71. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
72. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
73. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
74. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
75. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
76. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
77. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
78. shank3a ENSDARG00000063332 5 1 - - - - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
79. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
80. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
81. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
82. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
83. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
84. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
85. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
86. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
87. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
88. gzma ENSDARG00000090380, ENSDARG00000112472 0 1 - - - - - - - 1.000 - granzyme A [Source:ZFIN;Acc:ZDB-GENE-091204-156]
89. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
90. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
91. GGT5 GGT5 1 1 - - - - - - - - 1.000
92. pip5k1cb ENSDARG00000100313 3 1 - - - - - - - 1.000 - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
93. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
94. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
95. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
96. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
97. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
98. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
99. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
100. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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