Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptrhd1

Gene Name Gene ID Reads Annotation
ptrhd1 ENSDARG00000016122 2705 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]










Genes with expression patterns similar to ptrhd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptrhd1 ENSDARG00000016122 2705 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
2. PHB2 PHB2 3755 2.423 - 0.868 - 0.712 - - - 0.843 -
3. tns1 tns1 5891 2.377 - 0.779 - - - 0.871 0.727 - -
4. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 2.349 - 0.714 - - - 0.866 0.769 - - si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
5. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 1.962 - - - - - - - 0.963 0.999 atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
6. sf3b5 ENSDARG00000016855 4015 1.825 - 0.828 - - - - - - 0.997 splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
7. sulf1 ENSDARG00000038428 2748 1.801 - 0.860 - - - - - 0.941 - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
8. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 1.795 - - - - - - 0.797 - 0.998 nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
9. hmbsb ENSDARG00000055991 3037 1.79 - 0.851 - - - - - 0.939 - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
10. enpp1 ENSDARG00000005789 3267 1.773 - - - - - 0.788 - - 0.985 ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
11. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 1.77 - - - - - 0.815 - 0.955 - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
12. kri1 ENSDARG00000075380 1463 1.767 - 0.849 - - - - - 0.918 - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
13. chchd3 chchd3 4139 1.761 - - - - - - 0.763 - 0.998
14. palld ENSDARG00000040009 2381 1.752 - 0.753 - - - - - - 0.999 palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
15. clk4b ENSDARG00000005908 915 1.735 - - - - - 0.805 - 0.930 - CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
16. histh1l ENSDARG00000035519 12293 1.73 - - - - - - - 0.765 0.965 histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
17. vps36 ENSDARG00000057021 636 1.727 - - - - - 0.758 - 0.969 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
18. nipblb ENSDARG00000061052 6109 1.711 - - - - - - - 0.716 0.995 nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
19. krt1-19d ENSDARG00000023082 902 1.709 - - - - - 0.757 - 0.952 - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
20. psmb6 ENSDARG00000002240 8015 1.708 - - - - - 0.809 - 0.899 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
21. mrpl12 ENSDARG00000038768 5539 1.704 - 0.705 - - - - - - 0.999 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
22. rab23 ENSDARG00000004151 1077 1.699 - 0.729 - - - - - 0.970 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
23. fam105bb fam105bb 1253 1.698 - - - - - 0.700 - - 0.998
24. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.682 - - - - - 0.781 - 0.901 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
25. gpd1l ENSDARG00000040024 2182 1.674 - 0.740 - - - - - 0.934 - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
26. mybbp1a ENSDARG00000078214 2458 1.673 - 0.715 - - - - - 0.958 - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
27. rdh14b ENSDARG00000002467 991 1.667 - 0.702 - - - - - 0.965 - retinol dehydrogenase 14b [Source:ZFIN;Acc:ZDB-GENE-030131-6605]
28. nelfe ENSDARG00000004343 1647 1.665 - 0.762 - - - - - 0.903 - negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
29. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.651 - - - - - 0.900 0.751 - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
30. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.635 - - - - - - 0.739 0.896 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
31. dyrk2 ENSDARG00000094646 2163 1.615 - 0.812 - - - - 0.803 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
32. ngdn ENSDARG00000045372 782 1.614 - 0.750 - - - - - 0.864 - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
33. dbnlb ENSDARG00000016016 1412 1.613 - - - - - 0.719 - 0.894 - drebrin-like b [Source:ZFIN;Acc:ZDB-GENE-050522-293]
34. GPR161 ENSDARG00000055659 1067 1.612 - 0.787 - - - 0.825 - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
35. EEF1E1 ENSDARG00000071774 3806 1.605 - 0.756 - - - 0.849 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
36. bcas2 ENSDARG00000043631 1971 1.604 - 0.833 - - - 0.771 - - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
37. cth ENSDARG00000074301 3860 1.599 - 0.743 - - - - - 0.856 - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
38. eef1db ENSDARG00000030053 5185 1.599 - - - - - 0.763 0.836 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
39. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 1.597 - 0.726 - - - 0.871 - - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
40. cct8 ENSDARG00000008243 6843 1.596 - 0.812 - - - - - 0.784 - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
41. fgf6a ENSDARG00000009351 799 1.595 - 0.733 - - - 0.862 - - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
42. hmgb3b ENSDARG00000006408 3442 1.593 - 0.751 - - - 0.842 - - - high mobility group box 3b [Source:ZFIN;Acc:ZDB-GENE-050417-290]
43. fzd7b ENSDARG00000027589 2562 1.592 - 0.749 - - - - - 0.843 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
44. srpk3 ENSDARG00000005916 1546 1.592 - 0.813 - - - 0.779 - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
45. pip5k1ab ENSDARG00000024642 1988 1.587 - 0.755 - - - 0.832 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
46. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.581 - - - - - - 0.717 0.864 - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
47. ntmt1 ENSDARG00000022399 5779 1.579 - 0.822 - - - - 0.757 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
48. trim55b ENSDARG00000058158 586 1.577 - 0.731 - - - 0.846 - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
49. pi15a ENSDARG00000045378 2361 1.575 - 0.741 - - - - - 0.834 - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
50. RSF1_2 RSF1_2 1343 1.575 0.702 - - - - - - 0.873 -
51. pno1 ENSDARG00000008502 4547 1.572 - 0.809 - - - - 0.763 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
52. PTS ENSDARG00000045269 2185 1.572 - - - - - 0.715 - 0.857 - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
53. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.571 - 0.702 - - - 0.869 - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
54. ppapdc1b ppapdc1b 2866 1.57 - - - - - 0.764 - 0.806 -
55. ryr1a ENSDARG00000011422 2377 1.57 - 0.730 - - - 0.840 - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
56. pomp ENSDARG00000032296 4439 1.567 - 0.856 - - - - 0.711 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
57. timm13 ENSDARG00000058297 4447 1.562 - 0.823 - 0.739 - - - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
58. cx43 ENSDARG00000041799 2212 1.561 - 0.718 - - - 0.843 - - - connexin 43 [Source:ZFIN;Acc:ZDB-GENE-991105-4]
59. mef2aa ENSDARG00000031756 2699 1.56 - 0.821 - - - - 0.739 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
60. DNAJA4 ENSDARG00000051762 5657 1.552 - 0.834 - - - - 0.718 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
61. eif2s1a ENSDARG00000005827 5992 1.552 - 0.814 - - - 0.738 - - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
62. optc ENSDARG00000014358 1295 1.552 - 0.756 - - - 0.796 - - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
63. smg7 ENSDARG00000060767 2759 1.552 - 0.748 - - - 0.804 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
64. arid2 ENSDARG00000007413 4413 1.541 - 0.706 - - - - - 0.835 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
65. chtopa ENSDARG00000057234 3287 1.538 - 0.793 - - - 0.745 - - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
66. efemp2a ENSDARG00000094324 39261 1.538 - - - - - - 0.706 - 0.832 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
67. pbxip1a ENSDARG00000071015 4960 1.537 - 0.797 - - - - 0.740 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
68. ADAMTSL4 ENSDARG00000063407 1045 1.533 - 0.757 - - - 0.776 - - - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
69. ilk ENSDARG00000056964 6686 1.526 - 0.727 - - - - 0.799 - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
70. si:ch211-183d21.1 ENSDARG00000092499 1071 1.524 - 0.718 - - - 0.806 - - - si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]
71. znf106a ENSDARG00000016651 6049 1.524 - 0.820 - - - - 0.704 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
72. TMPO TMPO 3264 1.522 - 0.813 - - - - 0.709 - -
73. si:ch211-193k19.1 ENSDARG00000035660 636 1.52 - 0.703 - - - 0.817 - - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
74. wu:fb55g09 6015 1.516 - 0.755 - - - - 0.761 - - wu:fb55g09
75. adkb ENSDARG00000095947 990 1.514 - 0.712 - - - - 0.802 - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
76. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.512 - 0.759 - - - - 0.753 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
77. tgif1 ENSDARG00000059337 4020 1.508 - - - - - 0.715 - 0.793 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
78. tnnc1b ENSDARG00000037539 13945 1.508 - 0.798 - - - - 0.710 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
79. usp28 ENSDARG00000008880 1850 1.508 - 0.762 - - - - 0.746 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
80. polr2i ENSDARG00000040443, ENSDARG00000110652 879 1.507 0.752 0.755 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide I [Source:ZFIN;Acc:ZDB-GENE-041010-106]
81. g3bp1 ENSDARG00000017741 7622 1.506 - 0.722 - - - - - 0.784 - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
82. BX294110.1 ENSDARG00000096875 1761 1.505 - 0.753 - 0.752 - - - - -
83. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.505 - 0.789 - - - - 0.716 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
84. slc39a7 ENSDARG00000104451 6368 1.504 - - - - - 0.799 0.705 - - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
85. meis2b ENSDARG00000077840 5166 1.503 - 0.731 - - - 0.772 - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
86. FP017169.3 FP017169.3 216 1.5 - - - 0.749 - 0.751 - - -
87. tet3 ENSDARG00000062646 6672 1.5 - - - - - 0.704 - 0.796 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
88. SMIM4 ENSDARG00000089921, ENSDARG00000113338, ENSDARG00000114490 831 1.493 - - - - - 0.787 0.706 - - small integral membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-170130-1]
89. zgc:92907 ENSDARG00000011026 986 1.492 - 0.730 - - - - 0.762 - - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
90. mif ENSDARG00000071336 1328 1.492 - 0.712 - - - 0.780 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
91. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.491 - 0.731 - - - 0.760 - - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
92. nmrk2 ENSDARG00000067848 10293 1.491 - 0.787 - - - - 0.704 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
93. fermt2 ENSDARG00000020242 9351 1.491 - - - - - - 0.719 0.772 - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
94. pygmb ENSDARG00000013317 5454 1.49 - 0.785 - - - - 0.705 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
95. BX294434.1 ENSDARG00000061272 6493 1.489 - 0.763 - - - - 0.726 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
96. ppp1r12a ENSDARG00000010784 4333 1.488 - - - - - 0.770 0.718 - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
97. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.488 - 0.717 - - - - 0.771 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
98. pcmt ENSDARG00000015201 5132 1.487 - 0.781 - - - - 0.706 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
99. obsl1b ENSDARG00000077388 2511 1.487 - 0.726 - - - - 0.761 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
100. mt-nd4l ENSDARG00000063916 2229 1.486 - 0.716 - - - - 0.770 - - NADH dehydrogenase 4L, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-11]

There are 1496 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA