Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptrfb

Gene Name Gene ID Reads Annotation
ptrfb ptrfb 567










Genes with expression patterns similar to ptrfb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptrfb ptrfb 567 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. BX322608.1 ENSDARG00000111690 326 2.459 0.905 0.728 - - - - 0.826 - -
3. si:ch211-32p8.1 si:ch211-32p8.1 3402 1.765 0.912 0.853 - - - - - - -
4. pacrg ENSDARG00000087556 25 1.76 - - - 0.934 - - 0.826 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
5. epyc ENSDARG00000056950 7783 1.746 0.895 0.851 - - - - - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
6. COBLL1_1 COBLL1_1 787 1.722 0.900 0.822 - - - - - - -
7. ntla ntla 926 1.711 0.874 0.837 - - - - - - -
8. artnb ENSDARG00000093714 107 1.705 0.892 0.813 - - - - - - - artemin b [Source:ZFIN;Acc:ZDB-GENE-070705-129]
9. CABZ01079764.1 CABZ01079764.1 12103 1.661 0.843 0.818 - - - - - - -
10. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.653 0.914 0.739 - - - - - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
11. znf395 znf395 60 1.631 0.855 - - - - - 0.776 - -
12. slc46a1 ENSDARG00000026149 297 1.63 0.800 - - - - 0.830 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
13. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.629 0.755 0.874 - - - - - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
14. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.619 0.803 - - - - 0.816 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
15. CU463790.1 CU463790.1 60 1.618 0.803 - - - - 0.815 - - -
16. zgc:194470 zgc:194470 210 1.615 0.762 0.853 - - - - - - -
17. col9a3 ENSDARG00000037845 6564 1.612 0.776 0.836 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
18. fam46bb 601 1.61 0.796 0.814 - - - - - - - family with sequence similarity 46, member Bb
19. nrp1b ENSDARG00000027290 170 1.608 - 0.777 - - - 0.831 - - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
20. CABZ01044297.1 CABZ01044297.1 2015 1.608 0.887 0.721 - - - - - - -
21. LIMD1_1 LIMD1_1 348 1.604 0.831 0.773 - - - - - - -
22. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.601 - 0.761 - - - 0.840 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
23. col11a2 ENSDARG00000012422 3204 1.595 0.840 0.755 - - - - - - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
24. ihhb ENSDARG00000058815 31 1.592 0.743 0.849 - - - - - - - Indian hedgehog homolog b [Source:ZFIN;Acc:ZDB-GENE-980526-135]
25. CR450814.3 CR450814.3 608 1.59 0.868 0.722 - - - - - - -
26. lect1 7551 1.584 0.717 0.867 - - - - - - - leukocyte cell derived chemotaxin 1, transcript variant X1
27. KCTD14 ENSDARG00000110240 122 1.578 - - - - - 0.787 0.791 - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
28. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1.57 - 0.717 - - - - 0.853 - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
29. CR407547.1 ENSDARG00000117572 41 1.566 - 0.752 - - - 0.814 - - -
30. ntd5 ENSDARG00000040944 4988 1.565 0.812 0.753 - - - - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
31. B4GALNT1 B4GALNT1 352 1.561 - 0.794 - - - 0.767 - - -
32. akap6 ENSDARG00000077295 1382 1.555 - 0.787 - - - 0.768 - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
33. plod2 ENSDARG00000011821 1656 1.554 0.778 0.776 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
34. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1.552 0.816 - - - - - 0.736 - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
35. opn4.1 ENSDARG00000007553 66 1.548 0.730 - - - - 0.818 - - - opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
36. susd5 ENSDARG00000088277 439 1.545 0.794 0.751 - - - - - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
37. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.544 - 0.811 - - - 0.733 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
38. lgals1l1 ENSDARG00000088711 4515 1.536 0.735 0.801 - - - - - - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
39. CU469518.1 CU469518.1 214 1.533 0.823 0.710 - - - - - - -
40. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 1.531 - - - - - 0.794 0.737 - - novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
41. chad ENSDARG00000045071 903 1.528 0.822 0.706 - - - - - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
42. doc2d ENSDARG00000079962 76 1.523 0.803 - - - - 0.720 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
43. CNTNAP1 ENSDARG00000074524 73 1.52 - - - 0.701 - 0.819 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
44. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1.518 0.803 - - - - - 0.715 - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
45. tenm1 ENSDARG00000003403 148 1.518 - - - - - 0.811 0.707 - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
46. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.516 - 0.714 - - - 0.802 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
47. tldc1 ENSDARG00000062951 174 1.513 - - - - - 0.732 0.781 - - TBC/LysM-associated domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-140]
48. nudt18 ENSDARG00000041576 61 1.484 - 0.717 - - - - 0.767 - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
49. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.483 0.734 0.749 - - - - - - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
50. pi15a ENSDARG00000045378 2361 1.481 0.720 0.761 - - - - - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
51. sox2 ENSDARG00000070913 2763 1.48 - 0.731 - - - 0.749 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
52. loxl5b ENSDARG00000076904 468 1.468 0.724 0.744 - - - - - - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
53. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 1.464 - 0.730 - - - - 0.734 - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
54. ppp1r14c ENSDARG00000077341 1587 1.456 0.749 0.707 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
55. hoxb7a ENSDARG00000056030 1212 1.444 - 0.719 - - - 0.725 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
56. hbegfb ENSDARG00000031246 236 1.436 0.706 0.730 - - - - - - - heparin-binding EGF-like growth factor b [Source:ZFIN;Acc:ZDB-GENE-070820-6]
57. srpk1b ENSDARG00000031560 2079 1.431 - 0.717 - - - 0.714 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
58. tnika ENSDARG00000056218 728 1.413 - 0.706 - - - 0.707 - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
59. CABZ01100187.1 CABZ01100187.1 191 0.962 - - - - - 0.962 - - -
60. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.954 - - - - - 0.954 - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
61. CR774195.1 ENSDARG00000096831 124 0.935 - - - - - 0.935 - - -
62. errfi1 errfi1 979 0.931 - 0.931 - - - - - - -
63. scin ENSDARG00000010728, ENSDARG00000111092 437 0.928 - - - - - 0.928 - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
64. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 0.922 - 0.922 - - - - - - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
65. PAQR4 PAQR4 2150 0.919 0.919 - - - - - - - -
66. grasp ENSDARG00000000588, ENSDARG00000113330 766 0.919 - - - - - 0.919 - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
67. glmna ENSDARG00000058267 597 0.918 - - - - - 0.918 - - - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
68. NUDT8 ENSDARG00000007722 329 0.917 - - - - - 0.917 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
69. ptpn9b ENSDARG00000073902 755 0.911 - - - - - 0.911 - - - protein tyrosine phosphatase, non-receptor type 9, b [Source:ZFIN;Acc:ZDB-GENE-090313-52]
70. cog8 ENSDARG00000002798 229 0.91 - - - - - 0.910 - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
71. CR847510.1 CR847510.1 629 0.908 - 0.908 - - - - - - -
72. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.907 - - - - - 0.907 - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
73. wu:fc75a09 ENSDARG00000111625 289 0.904 - - - - - 0.904 - - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
74. chst10 ENSDARG00000031632 461 0.902 - - - - - 0.902 - - - carbohydrate sulfotransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040808-40]
75. TTC9 ENSDARG00000074363 196 0.901 - - - - - 0.901 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
76. cacna2d3 ENSDARG00000078760 211 0.901 - 0.901 - - - - - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
77. lpcat1 ENSDARG00000011506 263 0.901 - - - - - 0.901 - - - lysophosphatidylcholine acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-915]
78. bcl9l ENSDARG00000055054 128 0.9 - - - - - 0.900 - - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
79. fam96b 2255 0.896 - - - - - 0.896 - - - family with sequence similarity 96, member B
80. si:ch211-241e1.5 ENSDARG00000008906 70 0.894 - - - - - 0.894 - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
81. si:dkeyp-12a9.5 3058 0.893 0.893 - - - - - - - - si:dkeyp-12a9.5
82. cs ENSDARG00000103364 833 0.893 - - - - - 0.893 - - - citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
83. sncga ENSDARG00000034423, ENSDARG00000112260 5469 0.893 - 0.893 - - - - - - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
84. NRAP ENSDARG00000009341 3565 0.893 - 0.893 - - - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
85. znf592 ENSDARG00000060885 776 0.89 - - - - - 0.890 - - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
86. foxd1 ENSDARG00000029179 726 0.89 - 0.890 - - - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
87. cped1 ENSDARG00000045747 1024 0.889 0.889 - - - - - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
88. sas sas 1783 0.888 - - - - - 0.888 - - -
89. zgc:162936 ENSDARG00000069957 95 0.886 - 0.886 - - - - - - - zgc:162936 [Source:ZFIN;Acc:ZDB-GENE-030131-5253]
90. clu ENSDARG00000010434 498 0.885 - 0.885 - - - - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
91. mxra7 ENSDARG00000095300 332 0.884 - - - - - 0.884 - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
92. nkx6.1 ENSDARG00000022569 3779 0.883 - 0.883 - - - - - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
93. TNNC2 ENSDARG00000070835, ENSDARG00000111155 89 0.882 - 0.882 - - - - - - - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
94. CCDC181 ENSDARG00000062021 77 0.882 - 0.882 - - - - - - - coiled-coil domain containing 181 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
95. wdr90 ENSDARG00000079241 1163 0.881 - 0.881 - - - - - - - WD repeat domain 90 [Source:ZFIN;Acc:ZDB-GENE-070424-67]
96. si:ch211-136a13.1 ENSDARG00000060927 250 0.881 - - - - - - 0.881 - - si:ch211-136a13.1 [Source:ZFIN;Acc:ZDB-GENE-050419-214]
97. ltbp3 325 0.881 - 0.881 - - - - - - - latent transforming growth factor beta binding protein 3, transcript variant X3
98. dusp22b ENSDARG00000039850 133 0.88 - 0.880 - - - - - - - dual specificity phosphatase 22b [Source:ZFIN;Acc:ZDB-GENE-050417-257]
99. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 0.88 - 0.880 - - - - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
100. tnw 16679 0.879 - 0.879 - - - - - - - tenascin W, transcript variant X2

There are 1285 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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