Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptrfa

Gene Name Gene ID Reads Annotation
ptrfa ptrfa 4363










Genes with expression patterns similar to ptrfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptrfa ptrfa 4363 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 4.785 - 0.840 0.722 0.772 - 0.920 - 0.739 0.792 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
3. ttnb ttnb 73721 4.601 0.748 - 0.710 0.741 - 0.855 - 0.802 0.745
4. mybpc2b ENSDARG00000021265 9618 4.588 0.809 0.843 - 0.718 0.753 - - 0.720 0.745 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
5. mylz3 ENSDARG00000017441 303597 4.58 0.793 - - 0.801 0.786 0.716 - 0.714 0.770 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
6. ckma ENSDARG00000035327, ENSDARG00000114671 418792 4.56 0.789 - - 0.761 0.752 0.767 - 0.737 0.754 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
7. atp2a1 ENSDARG00000020574 291561 4.519 0.832 - 0.747 0.724 0.733 0.721 - - 0.762 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
8. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 4.147 0.851 0.879 - 0.821 - - - 0.758 0.838 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
9. jph1a ENSDARG00000058603 2852 4.052 - 0.852 - 0.791 0.736 0.898 - - 0.775 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
10. ryr3 ENSDARG00000071331 6795 4.019 0.729 0.875 0.701 - - 0.885 - - 0.829 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
11. smyd2b ENSDARG00000005629 8181 4.008 0.884 0.847 - - 0.701 0.808 - - 0.768 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
12. tnnt3a ENSDARG00000030270 112506 3.969 0.856 - - 0.792 - 0.759 - 0.716 0.846 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
13. hhatla ENSDARG00000039051 6598 3.907 0.853 0.859 0.702 0.713 - - - - 0.780 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
14. sucla2 ENSDARG00000005359 5992 3.886 0.748 0.794 - - - 0.826 0.778 - 0.740 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
15. CR847973.1 ENSDARG00000115516 8754 3.858 0.797 0.731 0.754 - - 0.835 - - 0.741
16. si:ch211-226o13.2 84923 3.846 - - 0.730 0.792 0.772 0.718 - - 0.834 si:ch211-226o13.2
17. prx ENSDARG00000017246 6183 3.846 0.801 0.805 0.705 0.754 - - - - 0.781 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
18. myhz1.3 ENSDARG00000067997 155509 3.774 0.838 - 0.705 0.727 0.756 0.748 - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
19. znf648 ENSDARG00000104823 1918 3.734 0.778 0.786 - 0.766 - 0.703 - - 0.701 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
20. si:ch211-255p10.3 ENSDARG00000096616 8336 3.727 - - 0.715 0.720 0.703 0.805 - - 0.784 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
21. sptb ENSDARG00000030490 7128 3.347 0.806 0.936 - - - 0.875 - - 0.730 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
22. trdn ENSDARG00000041779 4283 3.334 0.926 0.788 - - - 0.771 - - 0.849 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
23. znf106a ENSDARG00000016651 6049 3.249 0.891 0.817 - - - - - 0.795 0.746 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
24. jph2 ENSDARG00000028625 6706 3.245 0.897 - - - - 0.770 - 0.749 0.829 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
25. tnnt2d ENSDARG00000002988 7590 3.232 0.890 0.843 - - - 0.720 - - 0.779 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
26. SYNPO2L SYNPO2L 6697 3.224 0.857 - - 0.712 - 0.823 - - 0.832
27. AIMP1 ENSDARG00000060036 4136 3.22 0.752 0.849 - - - 0.828 - - 0.791 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
28. IGFN1 IGFN1 5030 3.218 0.846 0.858 - - - - - 0.719 0.795
29. xirp2a ENSDARG00000071113 7113 3.212 0.906 0.797 - - - 0.787 - - 0.722 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
30. murca murca 6614 3.212 0.896 - - - - 0.853 0.762 - 0.701
31. NRAP ENSDARG00000009341 3565 3.208 0.827 0.848 - 0.709 - 0.824 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
32. myod1 ENSDARG00000030110 6019 3.196 0.811 0.818 - - - 0.832 - - 0.735 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
33. BX294434.1 ENSDARG00000061272 6493 3.193 0.779 0.854 - 0.762 - - - - 0.798 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
34. PTPLA PTPLA 4044 3.189 0.837 0.845 - - - 0.764 - - 0.743
35. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.186 0.891 - - 0.715 - - 0.771 - 0.809 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
36. pygma ENSDARG00000055518 15972 3.182 0.883 0.867 - - 0.724 - - - 0.708 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
37. myoz1b ENSDARG00000071445 13381 3.181 0.821 - - 0.808 - - - 0.739 0.813 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
38. CR392006.1 CR392006.1 1401 3.166 0.778 0.848 - - - 0.823 - - 0.717
39. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.15 0.809 0.776 - - - 0.793 - - 0.772 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
40. ttna ttna 101197 3.136 0.849 - - - 0.705 - - 0.755 0.827
41. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.126 0.847 0.864 0.707 0.708 - - - - -
42. ckmb ENSDARG00000040565 505935 3.114 0.783 - - 0.806 0.785 0.740 - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
43. ryr1b ENSDARG00000023797 5693 3.11 - 0.860 - - 0.701 - - 0.713 0.836 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
44. tnnt3b ENSDARG00000068457 101827 3.098 - 0.858 0.747 0.766 - - - 0.727 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
45. cap2 ENSDARG00000104478 3266 3.089 0.789 0.741 - - - 0.773 - - 0.786 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
46. myl1 ENSDARG00000014196 98943 3.057 0.757 - - - 0.750 0.833 - 0.717 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
47. tpma ENSDARG00000033683 752432 3.037 0.839 - 0.705 0.738 0.755 - - - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
48. CABZ01079764.1 CABZ01079764.1 12103 3.029 0.713 0.728 - - 0.842 0.746 - - -
49. zgc:86725 2559 2.983 0.765 - - - - 0.781 - 0.709 0.728 zgc:86725
50. rtn2b ENSDARG00000057027 1391 2.945 0.777 0.712 - 0.716 - 0.740 - - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
51. sncga ENSDARG00000034423, ENSDARG00000112260 5469 2.943 - 0.755 - - 0.715 0.758 - - 0.715 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
52. mdh1b ENSDARG00000018008 3196 2.832 0.716 0.703 - - - - - 0.701 0.712 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
53. nexn ENSDARG00000057317 10972 2.627 0.938 - - - - 0.865 - - 0.824 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
54. limch1a ENSDARG00000074275 2981 2.591 0.857 0.911 - - - 0.823 - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
55. dtnba ENSDARG00000077694 5483 2.569 0.849 0.859 - - - 0.861 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
56. txlnbb ENSDARG00000076241 6396 2.536 0.794 0.864 - - - 0.878 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
57. stac3 ENSDARG00000098883 1765 2.528 0.867 0.766 - - - 0.895 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
58. fitm1 ENSDARG00000056464 1759 2.496 0.792 0.880 - - - 0.824 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
59. myhc4 ENSDARG00000035438 1322 2.495 0.830 0.820 - - - 0.845 - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
60. C13H10orf71 3489 2.493 0.800 0.907 - - - - - - 0.786 chromosome 13 C10orf71 homolog
61. cacng1 cacng1 3118 2.493 0.832 0.872 - - - 0.789 - - -
62. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.469 0.835 0.802 - - - 0.832 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
63. actn3b ENSDARG00000001431 15747 2.466 0.853 0.862 - - - - 0.751 - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
64. klhl41b ENSDARG00000006757 10762 2.466 0.821 - - - - 0.838 - - 0.807 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
65. MYOT ENSDARG00000076312 1791 2.461 0.837 0.817 - - - 0.807 - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
66. klhl40a ENSDARG00000039052 2537 2.459 0.829 0.811 - - - 0.819 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
67. chrna1 ENSDARG00000009021 2931 2.454 0.815 0.816 - - - 0.823 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
68. mir133b_1 671 2.452 0.843 0.864 - - - 0.745 - - - microRNA 133b
69. smyd1b ENSDARG00000091253 4964 2.448 0.885 0.791 - - - 0.772 - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
70. tgm2a ENSDARG00000070157 4516 2.447 0.912 - - - - 0.829 - - 0.706 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
71. SYNPO2 SYNPO2 7382 2.446 - - - - - 0.923 - 0.730 0.793
72. MYOM1 MYOM1 3870 2.433 0.809 0.854 - - - - - - 0.770
73. CR354540.2 ENSDARG00000117517 18452 2.426 0.879 - - - - - - 0.721 0.826
74. plod2 ENSDARG00000011821 1656 2.424 0.845 0.834 - - - 0.745 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
75. pi15a ENSDARG00000045378 2361 2.424 0.860 0.742 - - - 0.822 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
76. TRIM63 TRIM63 1600 2.419 0.785 0.822 - - - 0.812 - - -
77. srl ENSDARG00000104587 11126 2.419 0.840 0.875 - 0.704 - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
78. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 2.417 - 0.764 - 0.739 - 0.914 - - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
79. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.415 0.801 0.854 - - - - - - 0.760 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
80. six1a ENSDARG00000039304 1183 2.403 0.791 0.825 - - - 0.787 - - - SIX homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040718-155]
81. TENC1 TENC1 1729 2.4 0.802 0.778 - - - 0.820 - - -
82. EHBP1L1 EHBP1L1 2500 2.391 0.792 0.789 - - - 0.810 - - -
83. zgc:92518 ENSDARG00000016343 3837 2.39 0.790 - - - 0.711 0.889 - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
84. FHOD3_1 FHOD3_1 983 2.387 0.773 0.782 - - - 0.832 - - -
85. vwde ENSDARG00000103443 5758 2.374 0.710 0.835 - - - 0.829 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
86. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.372 0.822 - - - 0.764 0.786 - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
87. tnni2a.4 ENSDARG00000029069 122344 2.368 0.858 - - - 0.798 - - 0.712 - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
88. cmya5 ENSDARG00000061379 1423 2.368 0.890 0.772 - - - - - - 0.706 cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
89. col9a3 ENSDARG00000037845 6564 2.366 0.851 0.801 - - - 0.714 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
90. alpk3a ENSDARG00000078989 1992 2.365 0.721 0.903 - - - 0.741 - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
91. PTP4A3 ENSDARG00000039997 3814 2.364 0.764 0.823 - - - 0.777 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
92. rp42-pen rp42-pen 3395 2.363 - 0.863 - - 0.718 0.782 - - -
93. MUSTN1 MUSTN1 1882 2.36 0.752 0.837 - - - 0.771 - - -
94. sh3bgr ENSDARG00000021633 3498 2.359 0.880 0.769 - - - 0.710 - - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
95. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 2.357 0.821 0.816 - - - 0.720 - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
96. epyc ENSDARG00000056950 7783 2.356 0.793 0.757 - - - - - - 0.806 epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
97. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 2.349 0.719 - - - - 0.914 0.716 - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
98. mafa ENSDARG00000015890 2140 2.339 0.762 - - - - 0.767 - - 0.810 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
99. gypc ENSDARG00000041546 1487 2.339 0.779 0.823 - - - 0.737 - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
100. aqp4 ENSDARG00000010565 624 2.338 0.787 0.770 - - - 0.781 - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]

There are 1211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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