Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptprub_1

Gene Name Gene ID Reads Annotation
ptprub_1 ENSDARG00000101081 0 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]










Genes with expression patterns similar to ptprub_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. prph2a ENSDARG00000038018 2 2 - - - 1.000 - - - - 1.000 peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
2. ptprub_1 ENSDARG00000101081 0 2 - - - 1.000 - - - - 1.000 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
3. si:ch211-209n20.58 si:ch211-209n20.58 1 2 - - - 1.000 - - - - 1.000
4. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 1.728 - - - 0.761 - - - - 0.967 gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
5. C1GALT1_1 C1GALT1_1 1 1 - - - 1.000 - - - - -
6. grin1b ENSDARG00000025728 4 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1b [Source:ZFIN;Acc:ZDB-GENE-051202-2]
7. or110-2 ENSDARG00000091172 1 1 - - - - - - - - 1.000 odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
8. crygm2d15 ENSDARG00000069826 48 1 - - - 1.000 - - - - - crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
9. or128-1 ENSDARG00000105730 1 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-106]
10. diaph3 ENSDARG00000090785 16 1 - - - - - - - - 1.000 diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
11. si:dkey-37o8.1 ENSDARG00000071727 64 1 - - - - - - - - 1.000 si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
12. si:ch211-232m19.4 19 1 - - - 1.000 - - - - - si:ch211-232m19.4
13. or137-8 ENSDARG00000105705 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 137, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-28]
14. RMI2 ENSDARG00000103137 0 1 - - - 1.000 - - - - - RecQ mediated genome instability 2 [Source:ZFIN;Acc:ZDB-GENE-131125-13]
15. CU633857.1 ENSDARG00000115315 21 1 - - - 1.000 - - - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
16. C11H3orf14 C11H3orf14 15 1 - - - 1.000 - - - - -
17. BX465848.1 ENSDARG00000114947 1 1 - - - - - - - - 1.000
18. adrb3b ENSDARG00000052919 16 1 - - - - - - - - 1.000 adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
19. FAM183B FAM183B 25 1 - - - - - - - - 1.000
20. spg20a 8 1 - - - 1.000 - - - - - spastic paraplegia 20a (Troyer syndrome), transcript variant X1
21. il12a ENSDARG00000038878 3 1 - - - - - - - - 1.000 interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
22. si:dkeyp-104f11.1 si:dkeyp-104f11.1 1 1 - - - - - - - - 1.000
23. med8 ENSDARG00000114425 7 1 - - - 1.000 - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
24. CR391998.1 ENSDARG00000091817 15 1 - - - - - - - - 1.000 putative protein TPRXL [Source:NCBI gene;Acc:101882255]
25. zgc:175107 ENSDARG00000075417 39 1 - - - 1.000 - - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
26. pip5kl1 ENSDARG00000060946 2 1 - - - - - - - - 1.000 phosphatidylinositol-4-phosphate 5-kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060526-248]
27. rhobtb2b ENSDARG00000089340 4 1 - - - 1.000 - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
28. PACS1_2 PACS1_2 0 1 - - - - - - - - 1.000
29. hbaa1 ENSDARG00000097011 58 1 - - - - - - - - 1.000 hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
30. ENSDARG00000088134 ENSDARG00000088134 16 1 - - - 1.000 - - - - -
31. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - - - 1.000 - - - - -
32. CT025771.1 ENSDARG00000117721 13 1 - - - 1.000 - - - - -
33. zgc:162971 ENSDARG00000101093 1 1 - - - - - - - - 1.000 zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
34. dcst2 ENSDARG00000088693 1 1 - - - - - - - - 1.000 DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
35. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - 1.000 - - - - -
36. zgc:173708 zgc:173708 2 1 - - - - - - - - 1.000
37. CU681840.1 CU681840.1 3 1 - - - 1.000 - - - - -
38. ak7b ENSDARG00000017023 25 1 - - - - - - - - 1.000 adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
39. pcolce2b ENSDARG00000055575 2 1 - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
40. ttll3 ENSDARG00000053728 7 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
41. CENPQ 8 1 - - - 1.000 - - - - - centromere protein Q
42. CR339051.1 CR339051.1 9 1 - - - 1.000 - - - - -
43. rln3a ENSDARG00000070780 2 1 - - - - - - - - 1.000 relaxin 3a [Source:ZFIN;Acc:ZDB-GENE-050310-3]
44. cers3b ENSDARG00000036337 1 1 - - - 1.000 - - - - - ceramide synthase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-32]
45. ttll2 ENSDARG00000077853 9 1 - - - - - - - - 1.000 tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
46. si:ch211-217k17.3 si:ch211-217k17.3 2 1 - - - - - - - - 1.000
47. BX324198.1 BX324198.1 12 1 - - - 1.000 - - - - -
48. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - 1.000 - - - - -
49. RBBP6 ENSDARG00000037919 3 1 - - - 1.000 - - - - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
50. unc13ba ENSDARG00000017391 1 1 - - - - - - - - 1.000 unc-13 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-100921-10]
51. PSMB11 PSMB11 3 1 - - - 1.000 - - - - -
52. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - 1.000 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
53. SNORA3 SNORA3 0 1 - - - 1.000 - - - - -
54. rpgrip1l ENSDARG00000051754 2 1 - - - 1.000 - - - - - RPGRIP1-like [Source:ZFIN;Acc:ZDB-GENE-081104-81]
55. lhx2a ENSDARG00000037964 3 1 - - - 1.000 - - - - - LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-091118-109]
56. KLHDC8A ENSDARG00000061000 13 1 - - - 1.000 - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
57. si:dkey-233e3.5 si:dkey-233e3.5 7 1 - - - 1.000 - - - - -
58. plac8.1 ENSDARG00000043729 1 1 - - - - - - - - 1.000 placenta-specific 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050809-124]
59. taar14e ENSDARG00000090372, ENSDARG00000112236 0 1 - - - 1.000 - - - - - trace amine associated receptor 14e [Source:ZFIN;Acc:ZDB-GENE-041210-317]
60. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - 1.000 - - - - -
61. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
62. lrit1a ENSDARG00000019179 9 1 - - - - - - - - 1.000 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
63. cacna1f cacna1f 1 1 - - - - - - - - 1.000
64. PACRG ENSDARG00000087556 7 1 - - - 1.000 - - - - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
65. pcdh1a4 0 1 - - - 1.000 - - - - - protocadherin 1 alpha 4
66. mxra5b ENSDARG00000076309 190 1 - - - 1.000 - - - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
67. CCDC15 ENSDARG00000067517 28 1 - - - - - - - - 1.000 coiled-coil domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-120411-25]
68. crygm5 ENSDARG00000041179, ENSDARG00000112467 1 1 - - - - - - - - 1.000 crystallin, gamma M5 [Source:ZFIN;Acc:ZDB-GENE-041024-6]
69. or111-10 ENSDARG00000091216 0 1 - - - - - - - - 1.000 odorant receptor, family D, subfamily 111, member 10 [Source:ZFIN;Acc:ZDB-GENE-000329-10]
70. nitr1l 0 1 - - - - - - - - 1.000 novel immune-type receptor 1l, transcript variant X2
71. GRAMD2_1 GRAMD2_1 12 1 - - - 1.000 - - - - -
72. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - 1.000 - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
73. si:ch211-232m10.6 ENSDARG00000070931 2 1 - - - 1.000 - - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
74. MAD2L2 ENSDARG00000042456 0 1 - - - 1.000 - - - - - mitotic arrest deficient 2 like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-61]
75. wfikkn1 ENSDARG00000101364 11 1 - - - 1.000 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2465]
76. pcdh1a3 ENSDARG00000103602 4 1 - - - 1.000 - - - - - protocadherin 1 alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050202-3]
77. or115-1 ENSDARG00000018521 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
78. gpr34b ENSDARG00000002959 0 1 - - - 1.000 - - - - - G protein-coupled receptor 34b [Source:ZFIN;Acc:ZDB-GENE-040823-1]
79. si:ch211-222k6.3 ENSDARG00000071578 127 1 - - - 1.000 - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
80. si:dkey-26i13.8 ENSDARG00000062606 13 1 - - - - - - - - 1.000 si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
81. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - - - - - - - - 1.000
82. ASPG_1 ASPG_1 2 1 - - - 1.000 - - - - -
83. si:ch73-92e7.6 ENSDARG00000094309 0 1 - - - - - - - - 1.000 si:ch73-92e7.6 [Source:ZFIN;Acc:ZDB-GENE-081031-35]
84. CABZ01081748.1 ENSDARG00000102139 31 1 - - - 1.000 - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
85. CABZ01075923.1 CABZ01075923.1 6 1 - - - 1.000 - - - - -
86. zgc:113307 ENSDARG00000044894 17 1 - - - - - - - - 1.000 zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
87. si:dkey-189d19.1 si:dkey-189d19.1 2 1 - - - - - - - - 1.000
88. FRMD7 ENSDARG00000068958 17 1 - - - 1.000 - - - - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
89. lrp6 ENSDARG00000100143 1 1 - - - 1.000 - - - - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
90. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - - 1.000 - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
91. CU638737.1 CU638737.1 17 1 - - - 1.000 - - - - -
92. RASSF7 RASSF7 0 1 - - - - - - - - 1.000
93. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
94. si:dkey-61m24.1 0 1 - - - 1.000 - - - - - si:dkey-61m24.1
95. si:dkey-94a14.1 si:dkey-94a14.1 0 1 - - - - - - - - 1.000
96. si:dkey-33g13.1 si:dkey-33g13.1 3 1 - - - 1.000 - - - - -
97. iqcd ENSDARG00000035551 7 1 - - - 1.000 - - - - - IQ motif containing D [Source:ZFIN;Acc:ZDB-GENE-060526-200]
98. abcc13 ENSDARG00000062519 2 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
99. or137-3 ENSDARG00000070344 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 137, member 3 [Source:ZFIN;Acc:ZDB-GENE-070806-24]
100. U3_6 U3_6 0 1 - - - - - - - - 1.000

There are 172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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