Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptprub

Gene Name Gene ID Reads Annotation
ptprub ENSDARG00000101081 147 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]










Genes with expression patterns similar to ptprub

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptprub ENSDARG00000101081 147 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, U, b [Source:ZFIN;Acc:ZDB-GENE-030131-7036]
2. rad51c ENSDARG00000068919 98 1.634 - - - - 0.815 - 0.819 - - RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204]
3. mir184 48 1.611 - - - - - 0.781 0.830 - - microRNA 184
4. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.57 - 0.766 - - 0.804 - - - - distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
5. C2H14orf119 C2H14orf119 716 1.55 - - - - - 0.810 0.740 - -
6. sh3bp5a ENSDARG00000100529 642 1.505 0.720 - - - - - 0.785 - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
7. trim13 ENSDARG00000010010, ENSDARG00000110876, ENSDARG00000114862 767 1.489 - - - - - 0.770 0.719 - - tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]
8. CU634009.1 CU634009.1 165 1.46 0.753 - - - - - 0.707 - -
9. si:ch73-211l2.1 605 1.456 - 0.745 - - - - 0.711 - - si:ch73-211l2.1
10. fam92a1 ENSDARG00000004436 658 1.429 - 0.723 - - - - 0.706 - - family with sequence similarity 92, member A1 [Source:ZFIN;Acc:ZDB-GENE-040801-123]
11. sparcl1 ENSDARG00000074989 80 0.923 - - - - - - 0.923 - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
12. rhbdd2 ENSDARG00000092463 937 0.917 - 0.917 - - - - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
13. pde10a ENSDARG00000003449 60 0.915 - - - - - - 0.915 - - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
14. si:ch211-200p22.4 ENSDARG00000029170, ENSDARG00000110266 175 0.914 - - - - - - 0.914 - - si:ch211-200p22.4 [Source:ZFIN;Acc:ZDB-GENE-081104-61]
15. tnfaip6 ENSDARG00000093440, ENSDARG00000111060 91 0.899 - - - - - 0.899 - - - tumor necrosis factor, alpha-induced protein 6 [Source:ZFIN;Acc:ZDB-GENE-060421-2654]
16. RSBN1 RSBN1 599 0.899 - 0.899 - - - - - - -
17. CCDC34 CCDC34 313 0.899 - - - - - - 0.899 - -
18. rasl12 ENSDARG00000002701 66 0.897 - - - - - - 0.897 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
19. gpr39 ENSDARG00000102888 46 0.897 - - - - - - 0.897 - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
20. itga11b ENSDARG00000007950 17 0.896 - - - - - - 0.896 - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
21. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 0.891 - 0.891 - - - - - - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
22. DFNA5 DFNA5 201 0.884 - - - - - - 0.884 - -
23. cdc40 ENSDARG00000041226 514 0.879 - - - - - 0.879 - - - cell division cycle 40 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050116-3]
24. irs1 ENSDARG00000054087 1809 0.877 - - - - - - 0.877 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
25. CR848706.1 CR848706.1 128 0.871 - - - - - - 0.871 - -
26. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.865 - - - - 0.865 - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
27. ablim2 ENSDARG00000055223 1934 0.865 0.865 - - - - - - - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
28. TTF1_4 TTF1_4 504 0.863 - 0.863 - - - - - - -
29. scap ENSDARG00000018096 259 0.862 - - - - - - 0.862 - - SREBF chaperone [Source:ZFIN;Acc:ZDB-GENE-040107-41]
30. aak1 aak1 81 0.858 - - - - - 0.858 - - -
31. adrb3a ENSDARG00000053646 354 0.858 - - - - - - 0.858 - - adrenoceptor beta 3a [Source:ZFIN;Acc:ZDB-GENE-080917-21]
32. ube2w ENSDARG00000044923 438 0.858 - - - - - - 0.858 - - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
33. cbln13 ENSDARG00000026904, ENSDARG00000114505 93 0.854 - - - - - - 0.854 - - cerebellin 13 [Source:ZFIN;Acc:ZDB-GENE-070912-288]
34. si:ch211-171h4.7 ENSDARG00000088408 168 0.853 - - - - - - 0.853 - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
35. aplnrb ENSDARG00000036670 546 0.851 - - - - - - 0.851 - - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
36. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 0.851 - 0.851 - - - - - - - dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
37. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.849 - - - - - - 0.849 - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
38. CU570684.5 CU570684.5 55 0.848 - - - - - - 0.848 - -
39. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.848 - - - - - - 0.848 - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
40. cpeb4 cpeb4 57 0.847 - - - - - - 0.847 - -
41. BX546499.2 ENSDARG00000093947 26 0.846 - - - - - - 0.846 - -
42. HHIPL2 ENSDARG00000060008 162 0.846 - - - - - - 0.846 - - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
43. BX842696.1 BX842696.1 319 0.845 - - - - - - 0.845 - -
44. igsf21a ENSDARG00000031049 165 0.844 - - - - - - 0.844 - - immunoglobin superfamily, member 21a [Source:ZFIN;Acc:ZDB-GENE-050809-118]
45. soul5 ENSDARG00000075015 118 0.844 - - - - - - 0.844 - - heme-binding protein soul5 [Source:ZFIN;Acc:ZDB-GENE-110718-2]
46. zdhhc24_1 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 40 0.842 - - - - - - 0.842 - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
47. ulk1a ENSDARG00000062518 10 0.842 - - - - - - 0.842 - - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
48. map4k2l map4k2l 248 0.841 - - - - - - 0.841 - -
49. efr3a_1 ENSDARG00000005163, ENSDARG00000115083 571 0.841 - - - - - - 0.841 - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
50. specc1 ENSDARG00000029480 54 0.84 - - - - - - 0.840 - - sperm antigen with calponin homology and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-060526-207]
51. unc45a ENSDARG00000103643 622 0.839 - - - - - - 0.839 - - unc-45 myosin chaperone A [Source:ZFIN;Acc:ZDB-GENE-050417-158]
52. pwp1 ENSDARG00000015921 1160 0.837 - - - - - 0.837 - - - PWP1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1049]
53. otx5 ENSDARG00000043483 282 0.837 - - - - - - 0.837 - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
54. golgb1 ENSDARG00000061951 2023 0.833 - - - - - - 0.833 - - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
55. CNOT6 CNOT6 168 0.833 - - - - - 0.833 - - -
56. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.833 - - - - - - 0.833 - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
57. NMNAT3 ENSDARG00000077034 126 0.832 - - - - - - 0.832 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
58. si:zfos-364h11.1 99 0.831 - - - - - - 0.831 - - si:zfos-364h11.1, transcript variant X4
59. EDEM3 ENSDARG00000074129 805 0.829 - - - - - - 0.829 - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
60. kcnk10b ENSDARG00000045956 43 0.829 - - - - - - 0.829 - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
61. BX323449.2 BX323449.2 50 0.827 - - - - 0.827 - - - -
62. zgc:158417 ENSDARG00000101671 46 0.827 - - - - - 0.827 - - - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
63. lmf2a ENSDARG00000078094 352 0.827 0.827 - - - - - - - - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
64. si:dkey-222l20.1 si:dkey-222l20.1 375 0.824 - - - - - - 0.824 - -
65. si:ch211-218c6.9 si:ch211-218c6.9 40 0.824 - - - - - - 0.824 - -
66. TMEM55B TMEM55B 76 0.823 - - - - - - 0.823 - -
67. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 0.823 - - - - 0.823 - - - -
68. rassf1 ENSDARG00000004840 1248 0.823 0.823 - - - - - - - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
69. tanc2 tanc2 804 0.823 - - - - - - 0.823 - -
70. ccdc51 ENSDARG00000058828 436 0.822 - - - - - - 0.822 - - coiled-coil domain containing 51 [Source:ZFIN;Acc:ZDB-GENE-060825-200]
71. gng13b ENSDARG00000037921 215 0.822 - - - - - - 0.822 - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
72. C1H9orf156 C1H9orf156 122 0.822 - - - - - - 0.822 - -
73. smtla ENSDARG00000038191 42 0.821 - - - - - - 0.821 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
74. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 0.821 - 0.821 - - - - - - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
75. BX936303.1 ENSDARG00000103105 26 0.821 - - - - - - 0.821 - -
76. PPP1R35 ENSDARG00000068916 94 0.82 - - - - - - 0.820 - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
77. zbtb14 ENSDARG00000098273 36 0.82 - - - - - - 0.820 - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
78. asrgl1 ENSDARG00000021681 530 0.82 - - - - - - 0.820 - - asparaginase like 1 [Source:ZFIN;Acc:ZDB-GENE-050320-102]
79. HEATR2 HEATR2 6 0.819 - - - - - - 0.819 - -
80. wu:fi34b01 38 0.819 - - - - - - 0.819 - - wu:fi34b01
81. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 0.819 - - - - - - 0.819 - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
82. AP5B1 ENSDARG00000078805 62 0.819 - - - - - - 0.819 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
83. dlx6a ENSDARG00000042291 185 0.819 - - - - - - 0.819 - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
84. CABZ01054405.1 CABZ01054405.1 115 0.819 - - - - - - 0.819 - -
85. PRKCA_1 ENSDARG00000099841 12 0.819 - - - - - - 0.819 - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
86. lppr5b lppr5b 23 0.819 - - - - - - 0.819 - -
87. HIST1H4J HIST1H4J 31 0.819 - - - - - - 0.819 - -
88. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.819 - - - - - - 0.819 - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
89. ins ENSDARG00000035350, ENSDARG00000116735 317 0.819 - - - - - - 0.819 - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
90. C24H7orf10 C24H7orf10 7 0.819 - - - - - - 0.819 - -
91. dapp1 ENSDARG00000039535 23 0.819 - - - - - - 0.819 - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
92. swt1 ENSDARG00000094010 472 0.819 - - - - - - 0.819 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
93. pla1a ENSDARG00000102176, ENSDARG00000109274 29 0.819 - - - - - - 0.819 - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
94. FP085412.2 FP085412.2 5 0.819 - - - - - - 0.819 - -
95. si:dkeyp-100a1.6 ENSDARG00000092141 33 0.819 - - - - - - 0.819 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
96. BX324215.3 BX324215.3 12 0.819 - - - - - - 0.819 - -
97. rragd ENSDARG00000006279 75 0.817 - - - - - - 0.817 - - ras-related GTP binding D [Source:ZFIN;Acc:ZDB-GENE-070620-6]
98. stk3 ENSDARG00000011312, ENSDARG00000115118 460 0.817 - - - - - 0.817 - - - serine/threonine kinase 3 (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-2845]
99. JAG2 JAG2 427 0.817 - 0.817 - - - - - - -
100. nlgn4a 102 0.816 - - - - - - 0.816 - - neuroligin 4a, transcript variant X1

There are 328 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA