Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptpro

Gene Name Gene ID Reads Annotation
ptpro ENSDARG00000100422, ENSDARG00000110470 1850 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]










Genes with expression patterns similar to ptpro

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
2. myt1b ENSDARG00000102879 5411 3.954 0.840 - - 0.782 - 0.828 0.714 - 0.790 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
3. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.858 0.734 - 0.782 - - 0.858 0.766 - 0.718 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
4. nadl1.2 695 3.387 0.822 - - - - 0.958 0.773 - 0.834 neural adhesion molecule L1.2, transcript variant X1
5. ZFHX3 ENSDARG00000103057 7759 3.362 0.835 - 0.821 - 0.914 0.792 - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
6. slc1a2b ENSDARG00000102453 3136 3.27 0.829 - - - 0.976 0.750 - - 0.715 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
7. zic1 ENSDARG00000015567 2520 3.254 0.815 - 0.764 - - 0.923 0.752 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
8. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 3.157 - - 0.794 - - 0.795 0.762 - 0.806 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
9. nova2 ENSDARG00000017673 7685 3.106 0.922 - - 0.701 0.753 - - - 0.730 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
10. mdkb ENSDARG00000020708 5393 3.087 0.704 - 0.719 - - 0.944 - - 0.720 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
11. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 3.083 0.707 - - 0.728 - 0.943 0.705 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
12. hnrnpub ENSDARG00000004735 16496 3.08 0.772 - - 0.725 - 0.803 0.780 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
13. her4.1 ENSDARG00000056732 1264 3.061 0.731 - 0.740 - - 0.782 - - 0.808 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
14. plagx ENSDARG00000036855 3768 3.033 0.719 - 0.754 - - - 0.769 - 0.791 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
15. hmgb1b ENSDARG00000030479 10398 3.014 0.719 - 0.838 - 0.719 0.738 - - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
16. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.962 0.759 - - 0.732 - 0.746 0.725 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
17. sox2 ENSDARG00000070913 2763 2.622 0.920 - - 0.735 - 0.967 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
18. si:ch73-21g5.7 ENSDARG00000093156 9412 2.611 0.880 - 0.767 - - 0.964 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
19. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.596 0.780 - - - 0.873 0.943 - - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
20. pspc1 ENSDARG00000006621 966 2.595 - - - - - 0.921 0.779 - 0.895 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
21. hoxc4a ENSDARG00000070338 1382 2.586 0.878 - - - 0.887 0.821 - - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
22. CT030046.1 CT030046.1 190 2.584 0.779 0.846 - - - 0.959 - - -
23. dpysl5a ENSDARG00000011141 1827 2.578 0.898 - 0.804 - - 0.876 - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
24. stmn1b ENSDARG00000033655 9491 2.572 0.818 - - - - 0.955 - - 0.799 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
25. plp1a ENSDARG00000103732 3544 2.559 0.885 - - - - 0.924 - - 0.750 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
26. phc2b_1 ENSDARG00000013224 1316 2.527 0.717 - - - - 0.915 - - 0.895 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
27. stmn2a ENSDARG00000033234 2272 2.521 0.774 - - - - 0.931 - - 0.816 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
28. scrt2 ENSDARG00000056175 4331 2.519 0.792 - - - 0.888 0.839 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
29. pcdh1gc5 ENSDARG00000104826 10052 2.512 0.917 - 0.708 - - 0.887 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
30. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.512 0.903 - - - - 0.888 0.721 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
31. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.509 - - - - - 0.816 0.775 - 0.918 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
32. mex3b ENSDARG00000058369 1867 2.493 - - - - - 0.887 0.712 - 0.894 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
33. tmem59l ENSDARG00000003655 1536 2.492 0.877 0.718 - - - - - - 0.897 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
34. nrarpb ENSDARG00000018958 6225 2.491 0.860 - - 0.809 - 0.822 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
35. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.49 0.806 - - - - 0.898 0.786 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
36. slc1a3a ENSDARG00000104431 9888 2.478 0.878 - - - - 0.853 0.747 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
37. ank2b ENSDARG00000043313 3065 2.475 0.887 - - - - - 0.719 - 0.869 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
38. irx5a ENSDARG00000034043 1694 2.472 - - - 0.743 - 0.862 - - 0.867 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
39. tpcn1 ENSDARG00000062362 563 2.464 0.757 - - - 0.889 - - - 0.818 two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
40. gnao1a ENSDARG00000016676 8184 2.46 0.856 - - - 0.891 - - - 0.713 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
41. atl1 ENSDARG00000060481 251 2.46 0.779 - - - - 0.962 0.719 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
42. hes6 ENSDARG00000019335 4754 2.458 0.802 - - 0.809 - 0.847 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
43. mier1a ENSDARG00000041072 1690 2.454 0.703 - - - 0.888 - - - 0.863 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
44. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.451 0.732 0.880 - - - 0.839 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
45. ek1 ENSDARG00000020080 742 2.449 0.714 - - - - 0.953 0.782 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
46. ptbp2b ENSDARG00000015901 2458 2.443 0.809 - - - - 0.907 0.727 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
47. SNAP91 ENSDARG00000098809 556 2.442 0.831 - - - - 0.763 - - 0.848 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
48. arid1ab ENSDARG00000101891 1722 2.439 - - 0.727 - 0.901 0.811 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
49. cd99l2 ENSDARG00000056722 5036 2.429 - - - - - 0.909 0.706 - 0.814 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
50. VWA7 ENSDARG00000061462 816 2.426 0.797 - 0.715 - - 0.914 - - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
51. flrt3 ENSDARG00000076895 3516 2.425 - - - - 0.741 0.949 0.735 - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
52. sumo3a ENSDARG00000028119 13447 2.413 - - - 0.849 - 0.864 0.700 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
53. pdzrn4 ENSDARG00000045687 362 2.413 0.801 0.800 - - - 0.812 - - - PDZ domain containing ring finger 4 [Source:ZFIN;Acc:ZDB-GENE-041210-237]
54. gad2 ENSDARG00000015537 724 2.413 0.793 - - - - 0.739 - - 0.881 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
55. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.409 0.718 - - - - 0.921 - - 0.770 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
56. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.404 - - - 0.723 - - 0.751 - 0.930 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
57. naif1 ENSDARG00000062753 176 2.402 0.709 0.792 - - - 0.901 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
58. Sep-03 Sep-03 1124 2.393 0.883 - 0.739 - - 0.771 - - -
59. tdg tdg 3269 2.393 0.770 - - - 0.876 0.747 - - -
60. kdm1a ENSDARG00000060679 6152 2.389 - - 0.800 0.802 - - 0.787 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
61. si:dkey-25e11.10 si:dkey-25e11.10 955 2.385 0.773 - - - - 0.854 0.758 - -
62. DTX4 ENSDARG00000076302 2642 2.383 0.744 - - - - 0.929 0.710 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
63. npm1b ENSDARG00000037675 5448 2.381 - - - - 0.765 0.907 0.709 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
64. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 2.38 0.728 - - - - 0.809 - - 0.843 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
65. CABZ01111990.1 CABZ01111990.1 4374 2.378 0.856 - 0.720 - - - - - 0.802
66. sae1 ENSDARG00000010487 2028 2.368 0.808 - - 0.736 - 0.824 - - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
67. TUBA1A ENSDARG00000001889 25294 2.359 0.745 - - 0.807 - 0.807 - - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
68. sumo3b ENSDARG00000035993 3414 2.357 - - - 0.710 - - 0.755 - 0.892 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
69. fzd3a ENSDARG00000021664 1958 2.347 0.821 - 0.742 - - - 0.784 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
70. rcor2 ENSDARG00000008278 1678 2.345 - - 0.736 - - 0.900 0.709 - - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
71. vim ENSDARG00000010008 3551 2.344 0.876 - - - - 0.740 0.728 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
72. TNPO2 ENSDARG00000042887 2290 2.343 - - 0.776 0.707 - - - - 0.860 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
73. cspg5a ENSDARG00000069981 1699 2.335 0.759 - 0.779 - - - - - 0.797 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
74. FAM53C FAM53C 769 2.323 0.804 0.721 - - - 0.798 - - -
75. npas3b npas3b 1446 2.32 - - 0.753 - - 0.761 - - 0.806
76. CR936437.1 CR936437.1 6465 2.306 - - 0.773 0.751 - - 0.782 - -
77. med25 ENSDARG00000038005, ENSDARG00000115713 1305 2.305 - 0.706 - - - 0.864 0.735 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
78. si:ch73-21k16.6 si:ch73-21k16.6 4896 2.3 0.790 0.763 - - - - 0.747 - -
79. tle2 5014 2.299 - - - 0.772 - 0.739 0.788 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
80. apex1 ENSDARG00000045843 6345 2.297 - - 0.789 0.749 - - 0.759 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
81. slbp ENSDARG00000100558 3405 2.286 - - 0.727 0.807 - - - - 0.752 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
82. msi1 ENSDARG00000010710 2634 2.275 0.709 - 0.788 - - - - - 0.778 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
83. adcyap1b ENSDARG00000027740 1539 2.274 0.752 - - - - 0.811 0.711 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
84. uhrf1 ENSDARG00000103409 3282 2.273 0.732 - - - - 0.762 - - 0.779 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
85. fabp7a ENSDARG00000007697 5211 2.272 0.706 - - 0.783 - - 0.783 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
86. dbn1 ENSDARG00000069113 4527 2.261 0.808 - 0.725 - - - 0.728 - - drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
87. MAPK8IP1_1 MAPK8IP1_1 186 2.254 0.751 0.755 - - - 0.748 - - -
88. tprg1l ENSDARG00000068149 1605 2.251 0.767 - - - - 0.736 0.748 - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
89. kmt2a ENSDARG00000004537 2169 2.236 0.787 - 0.747 0.702 - - - - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
90. tmpob ENSDARG00000022978 8121 2.232 - - 0.774 - 0.735 0.723 - - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
91. zgc:112425 zgc:112425 293873 2.169 0.715 - - 0.742 - 0.712 - - -
92. ylpm1 ENSDARG00000043680 7676 2.167 0.744 - 0.713 - - - 0.710 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
93. SSBP4 ENSDARG00000056483 5156 2.164 0.751 - 0.702 - - - 0.711 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
94. dla ENSDARG00000010791 9281 1.867 0.919 - - - 0.948 - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
95. gpr144 gpr144 479 1.85 0.938 - - - - 0.912 - - -
96. PROCA1 ENSDARG00000069823 343 1.842 0.919 - - - - 0.923 - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
97. daxx ENSDARG00000000729 734 1.84 - - - - - 0.958 - - 0.882 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
98. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.837 0.937 - - - - 0.900 - - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
99. caly ENSDARG00000036008 1002 1.832 - - - - - 0.958 - - 0.874 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
100. CR388231.1 ENSDARG00000098710 153 1.826 - 0.871 - - - 0.955 - - -

There are 2963 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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