Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptprna

Gene Name Gene ID Reads Annotation
ptprna ENSDARG00000058646 1327 protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]










Genes with expression patterns similar to ptprna

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptprna ENSDARG00000058646 1327 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
2. dpysl5a ENSDARG00000011141 1827 4.702 - 0.727 0.818 - 0.724 0.740 0.932 0.761 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
3. nes ENSDARG00000088805 2710 4.248 - 0.739 - 0.838 0.792 0.912 0.967 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
4. AGO1 ENSDARG00000092644 4521 4.129 - - 0.831 - - 0.896 0.975 0.703 0.724 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
5. Sep-03 Sep-03 1124 3.946 - - 0.827 - 0.756 0.817 0.815 - 0.731
6. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 3.478 - 0.709 - - - 0.894 0.969 0.906 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
7. si:ch73-21g5.7 ENSDARG00000093156 9412 3.438 - 0.753 0.898 - - 0.814 0.973 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
8. nova1 ENSDARG00000020178 4129 3.435 - - - - 0.778 0.883 0.898 0.876 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
9. gsx1 ENSDARG00000035735 1243 3.374 - - 0.848 - - 0.793 0.957 0.776 - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
10. SPTBN4_1 ENSDARG00000092624 473 3.32 - 0.864 - - - 0.804 0.784 0.868 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
11. her4.1 ENSDARG00000056732 1264 3.301 - - 0.714 - 0.812 0.834 0.941 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
12. zic1 ENSDARG00000015567 2520 3.288 - - 0.833 - - 0.730 0.915 0.810 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
13. gap43 ENSDARG00000099744 4114 3.244 - 0.732 - - - 0.848 0.935 - 0.729 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
14. cspg5a ENSDARG00000069981 1699 3.222 - - 0.756 - - 0.710 0.923 0.833 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
15. her15.2 her15.2 1701 3.221 - 0.844 - - - 0.717 0.944 0.716 -
16. dlb ENSDARG00000004232 5120 3.173 - 0.781 - 0.707 0.794 - - 0.891 - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
17. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 3.16 - - - - - 0.773 0.814 0.856 0.717 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
18. magi1a ENSDARG00000070145 547 3.078 - - 0.732 - 0.827 0.706 0.813 - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
19. plagx ENSDARG00000036855 3768 3.049 - - 0.763 - 0.735 - 0.789 0.762 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
20. fam60al 2846 3.047 - - 0.728 - 0.709 0.821 0.789 - - family with sequence similarity 60, member A, like
21. mdkb ENSDARG00000020708 5393 3.014 - - 0.784 - - 0.754 0.763 0.713 - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
22. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 2.974 - - 0.706 0.836 0.712 - 0.720 - - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
23. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 2.961 - - 0.737 - 0.713 0.712 0.799 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
24. mapk12b ENSDARG00000006409 2246 2.697 - 0.919 - - - 0.807 0.971 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
25. TUBA1A ENSDARG00000001889 25294 2.689 - - - 0.787 - 0.944 0.958 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
26. nova2 ENSDARG00000017673 7685 2.683 - 0.781 - - - 0.925 0.977 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
27. ZFHX3 ENSDARG00000103057 7759 2.668 - - 0.851 - - 0.905 0.912 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
28. fyna ENSDARG00000011370 1679 2.663 - - - - - 0.823 0.912 0.928 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
29. cldn5a ENSDARG00000043716 3865 2.658 - - - - - 0.834 0.914 0.910 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
30. hmgb1b ENSDARG00000030479 10398 2.623 - - 0.825 - - 0.892 0.906 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
31. myt1b ENSDARG00000102879 5411 2.619 - 0.732 - - - 0.933 0.954 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
32. itm2ca ENSDARG00000043448 1265 2.618 - 0.801 - - - 0.906 0.911 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
33. msi1 ENSDARG00000010710 2634 2.616 - - 0.775 - - 0.929 0.912 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
34. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.61 - - - - 0.809 0.852 0.949 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
35. tuba1c ENSDARG00000055216 8384 2.608 - - - - 0.806 0.880 0.922 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
36. CU928222.1 ENSDARG00000097436 1662 2.607 - 0.775 - - - 0.882 0.950 - -
37. st8sia2 ENSDARG00000018788 2183 2.603 - - 0.804 - - 0.872 0.927 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
38. neurog1 ENSDARG00000056130 3924 2.592 - 0.739 - - - 0.877 0.976 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
39. scg2b ENSDARG00000038574 345 2.59 - - - - - 0.798 0.874 0.918 - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
40. fzd3a ENSDARG00000021664 1958 2.585 - - 0.844 - - 0.808 0.933 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
41. C8H1orf106 C8H1orf106 2690 2.576 - - - - - 0.818 0.959 0.799 -
42. stap2a ENSDARG00000092810 591 2.573 - - - - - 0.762 0.886 0.925 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
43. ADAMTS3 ENSDARG00000060127 2839 2.569 - 0.829 - - - 0.810 0.930 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
44. nrarpb ENSDARG00000018958 6225 2.566 - - - - - 0.895 0.966 - 0.705 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
45. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.564 - - 0.787 - - 0.864 0.913 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
46. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.563 - - 0.773 - - 0.876 0.914 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
47. slc1a2b ENSDARG00000102453 3136 2.561 - - - 0.814 - 0.821 0.926 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
48. relnl relnl 863 2.557 - - - - 0.800 0.875 0.882 - -
49. pcdh1gc5 ENSDARG00000104826 10052 2.555 - 0.729 - - - 0.882 0.944 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
50. CABZ01088330.1 CABZ01088330.1 679 2.554 - - - - - 0.901 0.834 0.819 -
51. st18 663 2.551 - 0.783 - - - 0.836 0.932 - - suppression of tumorigenicity 18, zinc finger
52. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.537 - 0.777 - - - 0.848 0.912 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
53. stx1b ENSDARG00000000503 2724 2.537 - 0.730 - - - 0.891 0.916 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
54. nadl1.1 1200 2.535 - 0.727 - - - 0.889 0.919 - - neural adhesion molecule L1.1, transcript variant X1
55. mllt11 ENSDARG00000071026 2518 2.535 - - - - - 0.871 0.903 - 0.761 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
56. notch1b ENSDARG00000052094 7874 2.528 - - - - - 0.762 0.918 0.848 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
57. kif5c ENSDARG00000076027 424 2.524 - - - - - 0.793 0.812 0.919 - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
58. hmp19 2554 2.513 - - - - - 0.858 0.953 - 0.702 HMP19 protein
59. nhlh2 ENSDARG00000025495 1860 2.513 - - - - - 0.791 0.960 - 0.762 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
60. mir10d-1 mir10d-1 860 2.511 - 0.737 - - - 0.879 0.895 - -
61. CHL1 CHL1 1553 2.507 - 0.707 - - - 0.861 0.939 - -
62. npas3b npas3b 1446 2.506 - - 0.822 - - 0.703 0.981 - -
63. SPOCK1 ENSDARG00000074644 794 2.505 - - - - 0.735 0.825 0.945 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
64. CABZ01029738.1 CABZ01029738.1 327 2.504 - 0.769 - - - 0.798 0.937 - -
65. ctnnd2b ENSDARG00000003779 964 2.5 - - - - - 0.794 0.977 0.729 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
66. dpysl4 ENSDARG00000103490 534 2.494 - 0.822 0.731 - - - 0.941 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
67. vezf1a ENSDARG00000008247 1449 2.493 - - - - 0.774 0.869 0.850 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
68. atp1b4 ENSDARG00000053262 1337 2.481 - 0.722 - - - 0.811 0.948 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
69. sox19b ENSDARG00000040266 532 2.481 - 0.756 - - - 0.773 0.952 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
70. si:dkey-7f3.9 ENSDARG00000079008 318 2.467 - - - - - 0.819 0.747 0.901 - si:dkey-7f3.9 [Source:ZFIN;Acc:ZDB-GENE-100922-197]
71. pax6a ENSDARG00000103379 3061 2.466 - 0.706 - - - 0.869 0.891 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
72. SLC5A7 SLC5A7 453 2.465 - 0.758 - - - 0.801 0.906 - -
73. clstn3 ENSDARG00000073883 590 2.465 - 0.712 - - - 0.866 0.887 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
74. her2 ENSDARG00000038205 3219 2.459 - - - 0.781 - - 0.956 0.722 - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
75. ptprnb ENSDARG00000077047 2743 2.452 - 0.797 - - - 0.846 0.809 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
76. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 2.451 - 0.721 - - - - 0.935 0.795 - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
77. stxbp1a ENSDARG00000001994 5154 2.446 - 0.737 - - - 0.802 0.907 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
78. CACFD1 ENSDARG00000090818 1298 2.445 - - - - - 0.711 0.893 0.841 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
79. smad3b ENSDARG00000010207 951 2.44 - - 0.706 - - 0.872 0.862 - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
80. add2 ENSDARG00000074581 1402 2.437 - 0.730 - - - 0.786 0.921 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
81. pcsk1nl ENSDARG00000076170 1232 2.437 - 0.717 - - - 0.808 0.912 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
82. fam219ab ENSDARG00000013813 591 2.435 0.705 - - - - 0.789 0.941 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
83. pcdh19 ENSDARG00000034344 2378 2.433 - - - - 0.815 0.774 0.844 - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
84. stmn1b ENSDARG00000033655 9491 2.432 - - - 0.726 - 0.742 0.964 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
85. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.43 - 0.760 - - - 0.755 0.915 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
86. si:ch211-202e12.3 401 2.43 - - - 0.721 - 0.889 0.820 - - si:ch211-202e12.3, transcript variant X6
87. sv2bb ENSDARG00000060711 196 2.424 - 0.733 - - - 0.760 0.931 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
88. CYTH2 ENSDARG00000028800 2349 2.422 - - - - - 0.794 0.894 - 0.734 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
89. lhfpl4a ENSDARG00000111810 206 2.421 - - - - - 0.803 0.884 - 0.734 lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
90. skib ENSDARG00000008034 6518 2.421 - 0.723 - - - 0.806 0.892 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
91. FAM171A2 FAM171A2 707 2.42 - 0.783 - - - - 0.845 0.792 -
92. atp2b3b ENSDARG00000023445 1424 2.417 - 0.773 - - - 0.708 0.936 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
93. SSX2IP SSX2IP 316 2.417 - 0.723 - - - 0.762 0.932 - -
94. SNAP91 ENSDARG00000098809 556 2.415 - 0.729 - - - 0.770 0.916 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
95. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.415 - 0.740 - - - 0.817 0.858 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
96. MAP1A MAP1A 847 2.411 - 0.716 - - - 0.845 0.850 - -
97. negr1 ENSDARG00000021607 1051 2.405 - - - - - 0.824 0.878 0.703 - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
98. stmn2a ENSDARG00000033234 2272 2.404 - 0.742 - - - 0.772 0.890 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
99. map1aa ENSDARG00000059601 599 2.398 - 0.791 - - - 0.748 0.859 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
100. ppp3ca ENSDARG00000004988 615 2.397 - - - - - 0.791 0.863 0.743 - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]

There are 1934 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA