Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptprja

Gene Name Gene ID Reads Annotation
ptprja ENSDARG00000033042 25 protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]










Genes with expression patterns similar to ptprja

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptprja ENSDARG00000033042 25 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
2. epb41l3b ENSDARG00000019917 9 2.388 - 0.824 - 0.856 - 0.708 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
3. SGCZ ENSDARG00000106258 2 2 - - - 1.000 - - 1.000 - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
4. CABZ01069022.1 ENSDARG00000105692 16 1.981 - 0.981 - - - - 1.000 - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
5. si:ch211-194e1.8 si:ch211-194e1.8 14 1.936 - 0.936 - 1.000 - - - - -
6. mapk9 ENSDARG00000077364 38 1.918 - 0.918 - - - - 1.000 - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
7. CABZ01078314.1 CABZ01078314.1 44 1.907 0.907 - - - - - 1.000 - -
8. si:dkey-15h19.3 si:dkey-15h19.3 5 1.907 0.907 - - 1.000 - - - - -
9. PAQR8 ENSDARG00000088828 26 1.888 0.907 0.981 - - - - - - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
10. WDR93 ENSDARG00000087191 51 1.83 0.907 0.923 - - - - - - - WD repeat domain 93 [Source:ZFIN;Acc:ZDB-GENE-161017-52]
11. si:ch211-264e16.2 ENSDARG00000094415 4 1.781 - - 0.781 1.000 - - - - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
12. CR936977.1 ENSDARG00000100144 4 1.781 - - 0.781 1.000 - - - - -
13. grxcr1 ENSDARG00000069865 22 1.781 1.000 - 0.781 - - - - - - glutaredoxin, cysteine rich 1 [Source:ZFIN;Acc:ZDB-GENE-070424-166]
14. postna ENSDARG00000043806 143 1.781 0.860 0.921 - - - - - - - periostin, osteoblast specific factor a [Source:ZFIN;Acc:ZDB-GENE-091113-23]
15. baiap2l1a ENSDARG00000029305 30 1.762 - 0.981 0.781 - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
16. ctssb.2 ctssb.2 122 1.754 0.907 0.847 - - - - - - -
17. il12a ENSDARG00000038878 3 1.745 - - - - 0.745 - 1.000 - - interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
18. ccdc11 ccdc11 79 1.719 0.907 0.812 - - - - - - -
19. CABZ01054394.1 ENSDARG00000090942 12 1.692 - - - 0.901 - 0.791 - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
20. si:ch211-278p9.1 ENSDARG00000087532 18 1.689 - 0.981 - - - 0.708 - - - si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
21. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1.689 - 0.981 - - - 0.708 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
22. chtopb ENSDARG00000070430 29 1.688 0.907 - 0.781 - - - - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
23. fmnl2a ENSDARG00000012586 136 1.676 - 0.955 - - - 0.721 - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
24. m17 ENSDARG00000035435 28 1.667 0.846 0.821 - - - - - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
25. CDKN2AIP ENSDARG00000035853 341 1.644 - 0.904 - - - 0.740 - - - CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
26. si:rp71-7l19.6 si:rp71-7l19.6 12 1.643 - 0.935 - - 0.708 - - - -
27. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1.629 - 0.812 - - - - 0.817 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
28. FKBP15_2 FKBP15_2 40 1.615 0.907 - - - - 0.708 - - -
29. zymnd12 17 1.615 0.907 - - - - 0.708 - - - zinc finger, MYND-type containing 12, transcript variant X1
30. ints12 ENSDARG00000091678 3261 1.609 0.832 0.777 - - - - - - - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
31. CLDN22 CLDN22 114 1.602 - 0.880 - - - - 0.722 - -
32. pax2b ENSDARG00000032578 12 1.583 - - 0.747 - - - 0.836 - - paired box 2b [Source:ZFIN;Acc:ZDB-GENE-001030-4]
33. bfb ENSDARG00000005616, ENSDARG00000110364 30 1.571 - 0.871 - - - - - - 0.700 complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
34. aak1 aak1 81 1.57 - 0.855 - - - - 0.715 - -
35. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1.568 - 0.819 - - - - 0.749 - - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
36. spef2 ENSDARG00000098330 59 1.568 0.860 - - - - 0.708 - - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
37. ddx31 ENSDARG00000035507 167 1.563 0.840 0.723 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
38. C18H19orf47 C18H19orf47 44 1.556 0.839 - - - - 0.717 - - -
39. rad51d ENSDARG00000026400 108 1.554 0.829 - - - - - 0.725 - - RAD51 paralog D [Source:ZFIN;Acc:ZDB-GENE-040426-2490]
40. ei24 ENSDARG00000053840 78 1.545 0.720 0.825 - - - - - - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
41. sema3d ENSDARG00000017369 212 1.54 - 0.820 - - - - 0.720 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
42. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1.538 - 0.830 - - - 0.708 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
43. si:dkeyp-80d11.4 ENSDARG00000103254 13 1.53 - 0.822 - - - 0.708 - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
44. col5a3b ENSDARG00000101816 56 1.525 - - - - - 0.708 0.817 - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
45. si:ch73-362m14.4 ENSDARG00000023940 88 1.512 0.743 - - - - - 0.769 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
46. OMA1 ENSDARG00000090503 19 1.504 - 0.796 - - - 0.708 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
47. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.5 0.792 - - - - 0.708 - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
48. elna 38 1.496 0.790 - - - - - 0.706 - - elastin a, transcript variant X20
49. TTC29 ENSDARG00000058885, ENSDARG00000112776 1 1.489 - - 0.781 - - 0.708 - - - tetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
50. si:dkey-61p9.7 ENSDARG00000068865 3 1.481 - - 0.781 - - - - - 0.700 si:dkey-61p9.7 [Source:ZFIN;Acc:ZDB-GENE-041210-241]
51. VOPP1 ENSDARG00000076373 12 1.431 0.723 - - - - 0.708 - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
52. si:ch211-59h6.1 ENSDARG00000013022 193 1.431 0.723 - - - - 0.708 - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
53. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1.428 - - 0.720 - - 0.708 - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
54. ankle2 ENSDARG00000035607 85 1 1.000 - - - - - - - - ankyrin repeat and LEM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6090]
55. rx1 ENSDARG00000071684 247 1 - - - - - - 1.000 - - retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
56. FAM83F FAM83F 8 1 - - - - - - 1.000 - -
57. tbx6 ENSDARG00000011785 132 1 - - - - - - 1.000 - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
58. zglp1 ENSDARG00000067669 6 1 - - - - - - 1.000 - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
59. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - 1.000 - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
60. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - - - 1.000 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
61. CR318629.1 CR318629.1 7 1 - - - - - - 1.000 - -
62. MFAP4 ENSDARG00000090783 8 1 - - - - - - 1.000 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
63. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - - 1.000 - -
64. antxr2b ENSDARG00000063011, ENSDARG00000112595 1 1 - - - 1.000 - - - - - ANTXR cell adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080213-4]
65. slc35c1 ENSDARG00000104669 65 1 - 1.000 - - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
66. ONECUT2 ENSDARG00000090387 8 1 - - - - - - 1.000 - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
67. syngr2b_1 ENSDARG00000104470 24 1 - - - - - - 1.000 - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
68. ela3l ENSDARG00000007276 11 1 - - - - - - 1.000 - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
69. elovl2 ENSDARG00000045414 119 1 - - - - - - 1.000 - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
70. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - - 1.000 - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
71. ZNF337_11 ZNF337_11 11 1 - - - - - - 1.000 - -
72. si:ch211-170h2.3 si:ch211-170h2.3 3 1 - - - 1.000 - - - - -
73. tekt3 ENSDARG00000045038 9 1 - - - - - - 1.000 - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
74. RAB3IL1 ENSDARG00000007711 11 1 1.000 - - - - - - - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
75. SLC44A1 SLC44A1 43 1 - - - - - - 1.000 - -
76. scgn ENSDARG00000058732, ENSDARG00000115991 119 1 - 1.000 - - - - - - - secretagogin, EF-hand calcium binding protein [Source:ZFIN;Acc:ZDB-GENE-041010-82]
77. C17orf105 C17orf105 1 1 - - - - - - 1.000 - -
78. slc47a2 2 1 - - - 1.000 - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 2
79. si:ch1073-284b18.3 si:ch1073-284b18.3 1 1 - - - 1.000 - - - - -
80. BX511270.1 BX511270.1 25 1 - - - - - - 1.000 - -
81. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - 1.000 - - - - -
82. npffr1l3 ENSDARG00000010712 18 1 1.000 - - - - - - - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
83. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - - - 1.000 - - - - -
84. zgc:113340 ENSDARG00000097473 2 1 - - - 1.000 - - - - - zgc:113340 [Source:ZFIN;Acc:ZDB-GENE-050327-34]
85. CT826375.4 CT826375.4 3 1 - - - - - - 1.000 - -
86. sec22bb ENSDARG00000100435 33 1 - - - - - - 1.000 - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
87. si:dkey-216e24.4 si:dkey-216e24.4 14 1 - - - - - - 1.000 - -
88. pdcl ENSDARG00000009480 12 1 - - - - - - 1.000 - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
89. knca7 17 1 - - - - - - 1.000 - - potassium voltage-gated channel, shaker-related subfamily, member 7
90. il17a/f3 ENSDARG00000041976 2 1 - - - 1.000 - - - - - interleukin 17a/f3 [Source:ZFIN;Acc:ZDB-GENE-041001-192]
91. FNDC3A ENSDARG00000105503 11 1 - - - - - - 1.000 - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
92. nts ENSDARG00000057887 5 1 - - - - - - 1.000 - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
93. slc26a6 ENSDARG00000055835, ENSDARG00000097292 66 1 - - - - - - 1.000 - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
94. akt3a ENSDARG00000104810 21 1 - - - - - - 1.000 - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
95. si:ch211-66k16.28 ENSDARG00000088423 80 1 - 1.000 - - - - - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
96. PLA2R1 ENSDARG00000077474 45 1 - - - - - - 1.000 - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
97. chd5 ENSDARG00000105083 132 1 - - - - - - 1.000 - - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
98. MPST MPST 6 1 - - - 1.000 - - - - -
99. piwil1 ENSDARG00000041699 21 1 1.000 - - - - - - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
100. dao.2 ENSDARG00000035603 8 1 - - - 1.000 - - - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]

There are 1231 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA