Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptprfa

Gene Name Gene ID Reads Annotation
ptprfa ENSDARG00000103479 1250 protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]










Genes with expression patterns similar to ptprfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptprfa ENSDARG00000103479 1250 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
2. map4k3a ENSDARG00000087742 771 1.831 - - - - - 0.846 - - 0.985 mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
3. cpla2 cpla2 1031 1.824 - - - - - 0.841 - - 0.983
4. ebag9 ENSDARG00000040021 2217 1.805 - 0.988 - - - - 0.817 - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
5. shmt1 ENSDARG00000052816 5463 1.795 - 0.946 - - - 0.849 - - - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
6. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 1.792 - 0.997 - - - 0.795 - - - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
7. stxbp5b ENSDARG00000029234 760 1.791 - - - - - 0.803 - - 0.988 syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
8. si:ch211-103e16.4 si:ch211-103e16.4 227 1.753 - - - - - 0.764 - - 0.989
9. atp6v1f ENSDARG00000045543 3445 1.75 - - - - - 0.770 - - 0.980 ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
10. apg3l apg3l 5153 1.734 - 0.955 - - - 0.779 - - -
11. swi5 ENSDARG00000078492 1299 1.725 - 0.996 - - - - 0.729 - - SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]
12. sf3a2 ENSDARG00000021107 2929 1.716 - 0.998 - - - 0.718 - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
13. ak2 ENSDARG00000005926 7598 1.712 - 0.906 - - - 0.806 - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
14. TRMT10A ENSDARG00000036678 621 1.702 - - - - - 0.715 - - 0.987 tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
15. rftn2 ENSDARG00000056078 1449 1.701 - - - - - 0.724 - - 0.977 raftlin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2760]
16. mal 906 1.692 0.819 - - - - 0.873 - - - mal, T-cell differentiation protein
17. c1qtnf5 ENSDARG00000056134 729 1.67 - - - - - 0.793 - - 0.877 C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
18. anxa11b ENSDARG00000002632 5132 1.658 - - - - - 0.708 - - 0.950 annexin A11b [Source:ZFIN;Acc:ZDB-GENE-030707-5]
19. arl14ep ENSDARG00000001210 3029 1.65 - - - - - - 0.762 - 0.888 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
20. cpsf3 ENSDARG00000027649 6897 1.643 - - - - - - 0.759 - 0.884 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
21. chl1a ENSDARG00000077881 1488 1.61 - - - - - - 0.747 - 0.863 cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
22. tax1bp1b ENSDARG00000056856 4526 1.601 - 0.794 - - - - 0.807 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
23. pof1b ENSDARG00000054060 2355 1.597 - - - - - 0.708 - - 0.889 POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
24. cdca8 ENSDARG00000043137 7541 1.571 - - - - - 0.758 0.813 - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
25. vgll4b ENSDARG00000103730 5266 1.545 - - - - - 0.814 0.731 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
26. cldnk ENSDARG00000042357 103 1.543 0.744 - - - - 0.799 - - - claudin k [Source:ZFIN;Acc:ZDB-GENE-040801-201]
27. otub1b ENSDARG00000011462 4329 1.532 - - - - - 0.717 0.815 - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
28. CU862021.1 CU862021.1 5925 1.516 - - - - - 0.736 0.780 - -
29. f2rl1.2 ENSDARG00000077540 822 1.501 - - - - - 0.751 0.750 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
30. si:dkey-95p16.2 ENSDARG00000093484 3413 1.498 - - - - - 0.788 0.710 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
31. pip5k1bb ENSDARG00000006508 2812 1.491 - - - - - 0.759 0.732 - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
32. prom2 ENSDARG00000039406 278 1.486 0.719 - - - - - 0.767 - - prominin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-16]
33. boc ENSDARG00000074335 4832 1.486 - - - - - - 0.707 - 0.779 BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
34. CU570791.5 CU570791.5 872 1.486 - - - - - 0.766 0.720 - -
35. lnx2b ENSDARG00000071478 654 1.475 0.717 - - - - 0.758 - - - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
36. prmt1 ENSDARG00000010246 11311 1.473 - - - - - - 0.743 - 0.730 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
37. N4BP2L1 N4BP2L1 573 1.463 - - - - - 0.709 - 0.754 -
38. SYDE2 ENSDARG00000099479 1891 1.456 - - - - - 0.710 0.746 - - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
39. atp13a atp13a 2867 1.437 - - - - - 0.708 - 0.729 -
40. ap1s3b ENSDARG00000027966 1064 1.432 - - - - - 0.712 0.720 - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
41. wu:fb17f05 wu:fb17f05 13622 1.431 - - - - - 0.710 0.721 - -
42. aurkb ENSDARG00000037640 4874 0.999 - 0.999 - - - - - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
43. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 0.998 - 0.998 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
44. ap1g1 ENSDARG00000102394 818 0.998 - 0.998 - - - - - - - adaptor related protein complex 1 subunit gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3187]
45. otud5a ENSDARG00000059006 2073 0.998 - 0.998 - - - - - - - OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
46. tmtc4 ENSDARG00000020447 873 0.998 - 0.998 - - - - - - - transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
47. pak6b ENSDARG00000052405 537 0.998 - 0.998 - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 6b [Source:ZFIN;Acc:ZDB-GENE-041014-121]
48. dzip1 ENSDARG00000000943, ENSDARG00000113867 911 0.998 - 0.998 - - - - - - - DAZ interacting zinc finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-040526-1]
49. TMEM106C ENSDARG00000098105 793 0.998 - 0.998 - - - - - - - transmembrane protein 106C [Source:ZFIN;Acc:ZDB-GENE-061013-562]
50. SMAD4 SMAD4 3233 0.998 - 0.998 - - - - - - -
51. irf6 ENSDARG00000101986 1438 0.998 - 0.998 - - - - - - - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
52. pmm2 ENSDARG00000037654 1783 0.998 - 0.998 - - - - - - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
53. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 0.998 - 0.998 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
54. plagl2 ENSDARG00000076657 2057 0.998 - 0.998 - - - - - - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
55. casc5 1487 0.998 - 0.998 - - - - - - - cancer susceptibility candidate 5, transcript variant X3
56. PWWP2A ENSDARG00000075526 2163 0.998 - 0.998 - - - - - - - PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
57. kat2a ENSDARG00000104734 802 0.998 - 0.998 - - - - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
58. NRD1 NRD1 3486 0.997 - 0.997 - - - - - - -
59. mgat1b ENSDARG00000036065 996 0.997 - 0.997 - - - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
60. ccdc80 ENSDARG00000000002 1284 0.997 - 0.997 - - - - - - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
61. slc25a33 ENSDARG00000039931 2794 0.997 - 0.997 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier), member 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2183]
62. rabggtb ENSDARG00000068587 1935 0.997 - 0.997 - - - - - - - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
63. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 0.997 - 0.997 - - - - - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
64. ddx27 ENSDARG00000091831 1471 0.997 - 0.997 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
65. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 0.997 - 0.997 - - - - - - - erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
66. CABZ01112358.1 CABZ01112358.1 667 0.997 - 0.997 - - - - - - -
67. trmt11 ENSDARG00000040033 1348 0.997 - 0.997 - - - - - - - tRNA methyltransferase 11 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-953]
68. serinc5 ENSDARG00000008153 2863 0.997 - 0.997 - - - - - - - serine incorporator 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2918]
69. vcp ENSDARG00000020008, ENSDARG00000116074 2284 0.997 - 0.997 - - - - - - - valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
70. NPR2 ENSDARG00000104393 1875 0.997 - 0.997 - - - - - - - natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
71. mphosph6 ENSDARG00000093007 340 0.997 - 0.997 - - - - - - - M-phase phosphoprotein 6 [Source:ZFIN;Acc:ZDB-GENE-040801-137]
72. DDX24 ENSDARG00000104708 861 0.997 - 0.997 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]
73. ppp3cca ENSDARG00000014962, ENSDARG00000112030 1301 0.997 - 0.997 - - - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, a [Source:ZFIN;Acc:ZDB-GENE-030829-36]
74. colgalt2 ENSDARG00000014670 1932 0.997 - 0.997 - - - - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
75. med12 ENSDARG00000103953, ENSDARG00000109815, ENSDARG00000116469 1894 0.997 - 0.997 - - - - - - - mediator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-060125-1]
76. CABZ01074130.1 ENSDARG00000105274 26501 0.996 - 0.996 - - - - - - -
77. mcm2 ENSDARG00000102798 8148 0.996 - 0.996 - - - - - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
78. slc30a7 ENSDARG00000019998, ENSDARG00000112372 2967 0.996 - 0.996 - - - - - - - solute carrier family 30 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5650]
79. nr4a1 ENSDARG00000000796, ENSDARG00000109473 1072 0.996 - 0.996 - - - - - - - nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11]
80. pknox1.1 ENSDARG00000018765 2149 0.996 - 0.996 - - - - - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
81. wu:fc34e06 1793 0.996 - 0.996 - - - - - - - wu:fc34e06, transcript variant X10
82. klc2 3058 0.996 - 0.996 - - - - - - - kinesin light chain 2
83. psmg2 ENSDARG00000035987 1938 0.996 - 0.996 - - - - - - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
84. notch1b ENSDARG00000052094 7874 0.996 - 0.996 - - - - - - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
85. aldh9a1b ENSDARG00000037061 2638 0.996 - 0.996 - - - - - - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
86. klhl40b ENSDARG00000019125 3633 0.995 - 0.995 - - - - - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
87. si:ch73-265d7.2 ENSDARG00000116713 2142 0.995 - 0.995 - - - - - - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
88. gnsb ENSDARG00000098296 1075 0.995 - 0.995 - - - - - - - glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b [Source:ZFIN;Acc:ZDB-GENE-030131-5846]
89. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.995 - 0.995 - - - - - - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
90. BX324201.1 BX324201.1 3302 0.994 - 0.994 - - - - - - -
91. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 0.994 - 0.994 - - - - - - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
92. syt4 ENSDARG00000036505 421 0.994 - - - - - - - - 0.994 synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
93. r3hdm1 ENSDARG00000101458 5241 0.994 - 0.994 - - - - - - - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
94. pbx2 ENSDARG00000019717 6892 0.994 - 0.994 - - - - - - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
95. hadhab ENSDARG00000060594 3664 0.993 - 0.993 - - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
96. smyd2a ENSDARG00000055151 2505 0.993 - 0.993 - - - - - - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
97. plekhg5a ENSDARG00000025902 397 0.993 - - - - - - - - 0.993 pleckstrin homology domain containing, family G (with RhoGef domain) member 5a [Source:ZFIN;Acc:ZDB-GENE-060503-766]
98. pip5k2 pip5k2 5743 0.992 - 0.992 - - - - - - -
99. tubb5 ENSDARG00000037997 18691 0.992 - 0.992 - - - - - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
100. entpd1 ENSDARG00000045066 2930 0.992 - 0.992 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-58]

There are 1220 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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