Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptprc

Gene Name Gene ID Reads Annotation
ptprc ENSDARG00000071437 104 protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]










Genes with expression patterns similar to ptprc

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptprc ENSDARG00000071437 104 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
2. helt ENSDARG00000056400 482 2.719 1.000 0.946 - - - - 0.773 - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
3. bicc2 ENSDARG00000076557 77 2.696 - 1.000 0.841 - - - - - 0.855 bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
4. CR388095.2 ENSDARG00000117604 76 2.485 - - 0.894 - - - 0.792 - 0.799
5. BX323861.1 ENSDARG00000099765 37 2.436 1.000 - - - - 0.713 0.723 - -
6. CABZ01029822.1 ENSDARG00000086931 1654 1.851 0.883 0.968 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
7. ZNF784_2 ZNF784_2 181 1.846 1.000 - - - - - - - 0.846
8. serpine3 ENSDARG00000057108 49 1.823 - - 0.929 - - - - - 0.894 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
9. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 1.773 1.000 - - - - - 0.773 - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
10. asic1b ENSDARG00000101866 61 1.749 1.000 - - - - 0.749 - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
11. ADAP2 ENSDARG00000070565 29 1.735 1.000 - - - - 0.735 - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
12. si:dkey-56m15.4 si:dkey-56m15.4 39 1.704 1.000 0.704 - - - - - - -
13. lppr5b lppr5b 23 1.704 1.000 0.704 - - - - - - -
14. si:ch211-10j20.7 si:ch211-10j20.7 8 1.704 1.000 0.704 - - - - - - -
15. BX548021.2 BX548021.2 4 1.704 1.000 0.704 - - - - - - -
16. si:dkey-4j21.1 17 1.704 1.000 0.704 - - - - - - - si:dkey-4j21.1, transcript variant X2
17. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.704 1.000 0.704 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
18. PGBD4 ENSDARG00000079328 20 1.704 1.000 0.704 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
19. CABZ01065506.1 CABZ01065506.1 204 1.704 1.000 0.704 - - - - - - -
20. atp2b3b ENSDARG00000023445 1424 1.7 0.787 0.913 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
21. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.69 0.826 0.864 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
22. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.682 - - - - - - 0.773 - 0.909 si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
23. hs3st3l ENSDARG00000059903 184 1.659 0.879 0.780 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
24. TUBB8P7 TUBB8P7 1353 1.656 0.770 0.886 - - - - - - -
25. acp5b ENSDARG00000101456, ENSDARG00000109721, ENSDARG00000110522 48 1.628 - - - - - - 0.733 - 0.895 acid phosphatase 5b, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040718-151]
26. sacs ENSDARG00000091042 314 1.623 - - - - - - 0.747 - 0.876 sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
27. plek2 ENSDARG00000012789 102 1.62 0.784 0.836 - - - - - - - pleckstrin 2 [Source:ZFIN;Acc:ZDB-GENE-080219-2]
28. si:ch211-191a16.5 ENSDARG00000096545 45 1.616 - - 0.843 - - - 0.773 - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
29. skap2 ENSDARG00000000906 146 1.614 - - - - - - 0.736 - 0.878 src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
30. SKOR2 SKOR2 1041 1.605 0.850 0.755 - - - - - - -
31. scn8aa ENSDARG00000005775 792 1.587 0.724 0.863 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
32. PPFIA3 ENSDARG00000077053 310 1.583 0.879 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
33. TENM2 ENSDARG00000037122 48 1.582 0.878 0.704 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
34. ddx54 ENSDARG00000105286 183 1.579 - - 0.787 - - 0.792 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:ZFIN;Acc:ZDB-GENE-021220-2]
35. SV2B SV2B 208 1.579 0.733 0.846 - - - - - - -
36. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.578 0.874 0.704 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
37. ttll9 ENSDARG00000062806 89 1.572 - - 0.763 - - 0.809 - - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
38. syngr3b ENSDARG00000025034 290 1.562 0.721 0.841 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
39. PGBD4_2 PGBD4_2 184 1.562 - 0.817 - - - - - - 0.745
40. XKR7 ENSDARG00000026333 175 1.56 0.856 0.704 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
41. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.558 0.854 0.704 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
42. fam73b 76 1.552 - - 0.744 - - - - - 0.808 family with sequence similarity 73, member B
43. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 1.55 - - - - - - 0.793 - 0.757 forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
44. nptx1l ENSDARG00000074671 569 1.548 0.791 0.757 - - - - - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
45. fut11 ENSDARG00000102402 56 1.547 - - - - 0.704 - - - 0.843 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
46. cacna2d3 ENSDARG00000078760 211 1.544 0.795 0.749 - - - - - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
47. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.539 0.754 0.785 - - - - - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
48. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.538 0.752 0.786 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
49. lgi2a ENSDARG00000111069 965 1.531 0.830 0.701 - - - - - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
50. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 1.528 0.807 - - - - - 0.721 - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
51. GADD45G GADD45G 382 1.517 0.813 0.704 - - - - - - -
52. atr ENSDARG00000079625 231 1.509 - - - - - 0.774 0.735 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
53. POR POR 973 1.506 - - - - - - 0.725 - 0.781
54. cbr4 ENSDARG00000009074 240 1.502 - - 0.701 - - - - - 0.801 carbonyl reductase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1796]
55. MAP1A MAP1A 847 1.49 0.739 0.751 - - - - - - -
56. fam89b ENSDARG00000069106 294 1.489 - 0.732 0.757 - - - - - - family with sequence similarity 89, member B [Source:ZFIN;Acc:ZDB-GENE-091204-269]
57. rnf213b ENSDARG00000103551 63 1.487 - 0.704 - - - - - - 0.783 ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
58. zgc:194665 ENSDARG00000004577 136 1.487 0.783 0.704 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
59. ARX ARX 71 1.476 - 0.704 - - - - - - 0.772
60. scnm1 ENSDARG00000003027 256 1.47 - - 0.702 - - - - - 0.768 sodium channel modifier 1 [Source:ZFIN;Acc:ZDB-GENE-030131-415]
61. gpr22 gpr22 115 1.47 0.766 0.704 - - - - - - -
62. scin ENSDARG00000010728, ENSDARG00000111092 437 1.456 0.752 0.704 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
63. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1.444 - 0.704 - - - 0.740 - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
64. LRP3 ENSDARG00000008485 1401 1.437 - 0.704 - - - - - - 0.733 low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
65. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.434 0.730 0.704 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
66. si:ch73-49p17.1 69 1.433 - 0.704 - - - - - - 0.729 si:ch73-49p17.1
67. olah ENSDARG00000058502 100 1.431 - - 0.716 - - - 0.715 - - oleoyl-ACP hydrolase [Source:ZFIN;Acc:ZDB-GENE-060312-17]
68. pcsk5a ENSDARG00000067537 44 1.428 - 0.704 - - - - 0.724 - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
69. CR847906.1 ENSDARG00000099493 88 1.417 - 0.704 - - - - - - 0.713 protein NLRC3-like [Source:NCBI gene;Acc:571651]
70. UBAC2 ENSDARG00000093065, ENSDARG00000116281, ENSDARG00000116596 16 1 1.000 - - - - - - - - UBA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-2122]
71. znf652 ENSDARG00000062302 17 1 - 1.000 - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
72. sycp3 ENSDARG00000013438 25 1 1.000 - - - - - - - - synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
73. yod1 ENSDARG00000008542 56 1 1.000 - - - - - - - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
74. si:ch211-14g4.4 si:ch211-14g4.4 6 1 1.000 - - - - - - - -
75. CABZ01084273.1 CABZ01084273.1 16 1 1.000 - - - - - - - -
76. lrrc4.1 ENSDARG00000069402 323 1 - 1.000 - - - - - - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
77. si:ch211-106n13.3 ENSDARG00000052633 3 1 - 1.000 - - - - - - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
78. xkr8.1 ENSDARG00000004498 18 1 1.000 - - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
79. rnf217 ENSDARG00000060944 10 1 1.000 - - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
80. CR936967.1 CR936967.1 2 1 1.000 - - - - - - - -
81. GPR22 GPR22 33 1 1.000 - - - - - - - -
82. KCNJ3_1 KCNJ3_1 30 1 1.000 - - - - - - - -
83. si:dkey-79c1.1 ENSDARG00000093179 11 1 1.000 - - - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
84. si:ch211-215c18.3 ENSDARG00000095308 11 1 1.000 - - - - - - - - si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]
85. lrrc24 ENSDARG00000101704 224 1 - 1.000 - - - - - - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
86. si:ch211-210c8.5 si:ch211-210c8.5 6 1 1.000 - - - - - - - -
87. zdhhc12b ENSDARG00000052787 43 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
88. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
89. si:ch73-57f22.2 ENSDARG00000087453 28 1 1.000 - - - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
90. elovl4a ENSDARG00000006773 412 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
91. si:dkeyp-53d3.3 ENSDARG00000098664 65 1 1.000 - - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
92. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
93. FUT9 FUT9 91 1 1.000 - - - - - - - -
94. si:ch211-240g9.1 36 1 - 1.000 - - - - - - - si:ch211-240g9.1
95. DIP2B DIP2B 18 1 1.000 - - - - - - - -
96. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
97. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
98. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
99. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
100. si:dkey-49n23.3 ENSDARG00000095325 4 1 1.000 - - - - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]

There are 1401 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA