Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptprb

Gene Name Gene ID Reads Annotation
ptprb ENSDARG00000076624 323 protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]










Genes with expression patterns similar to ptprb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptprb ENSDARG00000076624 323 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]
2. RASIP1 ENSDARG00000074829 113 1.698 - - - - - 0.854 0.844 - - Ras interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-120403-3]
3. snx8a ENSDARG00000074842 411 1.619 - - - - - - 0.766 0.853 - sorting nexin 8a [Source:ZFIN;Acc:ZDB-GENE-031202-1]
4. rgs2 ENSDARG00000098761, ENSDARG00000109741 324 1.617 0.768 - - - - - 0.849 - - regulator of G protein signaling 2 [Source:ZFIN;Acc:ZDB-GENE-040718-410]
5. aspn ENSDARG00000002192 218 1.6 - - - - - 0.802 0.798 - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
6. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 1.6 - - - - - - 0.775 0.825 - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
7. cyp1a ENSDARG00000098315 273 1.598 - 0.767 - - - - 0.831 - - cytochrome P450, family 1, subfamily A [Source:ZFIN;Acc:ZDB-GENE-011219-1]
8. TTBK2 TTBK2 303 1.581 - 0.771 - - - - - 0.810 -
9. rspry1 ENSDARG00000062558 1424 1.576 - 0.817 - - - - - 0.759 - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
10. CR538726.1 ENSDARG00000097179 321 1.553 0.741 - - - - - - 0.812 -
11. C25H12orf73 C25H12orf73 2031 1.552 - 0.723 - - - - 0.829 - -
12. noc4l ENSDARG00000045565 1337 1.55 - - - - - - 0.722 0.828 - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
13. wrnip1 ENSDARG00000005218 695 1.547 0.782 - - - - - 0.765 - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
14. stab1 ENSDARG00000076484 717 1.538 - 0.780 - - - - 0.758 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
15. gpn3 ENSDARG00000069525 499 1.529 0.775 - - - - - 0.754 - - GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
16. cilp ENSDARG00000053362 1429 1.524 - - - - - - 0.783 0.741 - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
17. ccdc136b ENSDARG00000057921, ENSDARG00000075513 387 1.521 - - 0.756 - - - 0.765 - - coiled-coil domain containing 136b [Source:ZFIN;Acc:ZDB-GENE-081104-244]
18. BX530066.1 BX530066.1 42 1.513 0.724 0.789 - - - - - - -
19. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.512 - 0.775 - - - - 0.737 - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
20. FAM72B ENSDARG00000070621 501 1.507 - 0.715 - - - - - 0.792 - family with sequence similarity 72 member B [Source:HGNC Symbol;Acc:HGNC:24805]
21. ptpn4a ENSDARG00000000631, ENSDARG00000112876 626 1.506 - 0.714 - - - - 0.792 - - protein tyrosine phosphatase, non-receptor type 4a [Source:ZFIN;Acc:ZDB-GENE-030616-449]
22. tsr2 ENSDARG00000005772 1155 1.506 - 0.753 - - - - - 0.753 - TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-021231-2]
23. nmd3 ENSDARG00000015676 303 1.505 - 0.703 - - - - 0.802 - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
24. myct1 myct1 217 1.504 - - - - - 0.716 0.788 - -
25. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.495 - 0.746 - - - - 0.749 - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
26. rxrab ENSDARG00000035127 231 1.493 - - - - - - 0.726 0.767 - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
27. fbxo8 ENSDARG00000007477 603 1.478 - 0.703 - - - - 0.775 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
28. U1_33 U1_33 76 1.473 - - 0.705 - - - 0.768 - -
29. pak7 ENSDARG00000030154 197 1.444 - - - - - 0.714 0.730 - - p21 protein (Cdc42/Rac)-activated kinase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2085]
30. atp1a1a.4 ENSDARG00000001870 1864 1.443 - 0.717 - - - - 0.726 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
31. stk16 ENSDARG00000037777 255 0.932 - - - - - - - 0.932 - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
32. CABZ01087549.1 CABZ01087549.1 108 0.927 - - - - - - - 0.927 -
33. trim16 ENSDARG00000010673 519 0.921 - - - - - - - 0.921 - tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
34. SEMA4B SEMA4B 1259 0.902 - - - - - - - 0.902 -
35. ADAMTS2 ENSDARG00000075930 7 0.902 0.902 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 2 [Source:ZFIN;Acc:ZDB-GENE-070816-3]
36. vegfab ENSDARG00000034700 366 0.901 0.901 - - - - - - - - vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
37. C10H21orf59 275 0.9 - 0.900 - - - - - - - c10h21orf59 homolog (H. sapiens)
38. DCUN1D3 ENSDARG00000011493 319 0.896 - - - - - - - 0.896 - defective in cullin neddylation 1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-2]
39. PPFIA3 ENSDARG00000077053 310 0.896 0.896 - - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
40. phospho1 ENSDARG00000008403 729 0.891 - - - - - - - 0.891 - phosphatase, orphan 1 [Source:ZFIN;Acc:ZDB-GENE-040801-198]
41. znf598 ENSDARG00000014945 1838 0.889 - - - - - - - 0.889 - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
42. ankrd50l ENSDARG00000007077 1115 0.885 - - - - - - - 0.885 - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
43. alkbh6 ENSDARG00000077253 117 0.885 0.885 - - - - - - - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
44. BX569781.3 BX569781.3 576 0.883 - - - - - - - 0.883 -
45. accs ENSDARG00000052124 294 0.879 0.879 - - - - - - - - 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) [Source:ZFIN;Acc:ZDB-GENE-050327-39]
46. CU929219.1 CU929219.1 383 0.874 0.874 - - - - - - - -
47. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 0.874 - - - - - - - 0.874 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
48. ndst2b ENSDARG00000060678 453 0.873 - - - - - - - 0.873 - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
49. CABZ01003826.1_1 CABZ01003826.1_1 1154 0.87 - - - - - - - 0.870 -
50. ranbp10 ENSDARG00000062138, ENSDARG00000110661 2067 0.864 - 0.864 - - - - - - - RAN binding protein 10 [Source:ZFIN;Acc:ZDB-GENE-070705-86]
51. podxl ENSDARG00000031228 1744 0.863 - 0.863 - - - - - - - podocalyxin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2805]
52. nedd4l ENSDARG00000060006 1669 0.863 - - - - - - - 0.863 - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
53. cacnb2a ENSDARG00000099045 374 0.863 - - - - - - - 0.863 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
54. elna 38 0.861 - 0.861 - - - - - - - elastin a, transcript variant X20
55. chrna2b ENSDARG00000057025 217 0.859 - - - - - - - 0.859 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
56. dclk2 dclk2 719 0.859 0.859 - - - - - - - -
57. STIM2 STIM2 644 0.859 - - - - - - - 0.859 -
58. TRIM14_7 TRIM14_7 381 0.858 - - - - - - - 0.858 -
59. she ENSDARG00000087956 941 0.857 - 0.857 - - - - - - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
60. styx ENSDARG00000057699 48 0.857 - - - - - - - 0.857 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
61. phf19 ENSDARG00000078050 117 0.857 - - - - - - - 0.857 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
62. hey2 ENSDARG00000013441 540 0.856 - - - - - - - 0.856 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
63. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 0.855 - - - - - - - 0.855 - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
64. SLC35A2 ENSDARG00000058990 289 0.854 - - - - - - - 0.854 - solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
65. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 0.854 - - - - - - - 0.854 - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
66. pou3f3a ENSDARG00000042032 2835 0.854 - - - - - - - 0.854 - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
67. mlh1 ENSDARG00000025948 130 0.854 - - - - - - - 0.854 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
68. si:dkey-266m15.6 ENSDARG00000078508 490 0.854 - - - - - - - 0.854 - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
69. nr1i2 ENSDARG00000029766 458 0.852 - - - - - - - 0.852 - nuclear receptor subfamily 1, group I, member 2 [Source:ZFIN;Acc:ZDB-GENE-030903-3]
70. CR848836.5 CR848836.5 42 0.852 - - - - - - - 0.852 -
71. JAKMIP3 ENSDARG00000100708 56 0.852 - - - - - - - 0.852 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
72. SNAPC2 ENSDARG00000036473 158 0.852 - - - - - - - 0.852 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
73. si:ch211-254c8.2 233 0.852 - - - - - - - 0.852 - si:ch211-254c8.2, transcript variant X4
74. BX682234.2 BX682234.2 28 0.852 - - - - - - - 0.852 -
75. FCHSD2 FCHSD2 35 0.852 - - - - - - - 0.852 -
76. CR936337.1 CR936337.1 38 0.852 - - - - - - - 0.852 -
77. si:ch73-67c22.3 si:ch73-67c22.3 30 0.852 - - - - - - - 0.852 -
78. sv2ba ENSDARG00000057427 33 0.851 - - - - - - - 0.851 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
79. si:ch211-106h4.9 ENSDARG00000075706 36 0.851 - - - - - - - 0.851 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
80. htra3a ENSDARG00000052895 28 0.851 - - - - - - - 0.851 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
81. si:ch211-67e16.2 41 0.85 - - - - - - - 0.850 - si:ch211-67e16.2, transcript variant X2
82. elp3 ENSDARG00000042005 936 0.85 - - - - - - - 0.850 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
83. mknk1 ENSDARG00000018411 749 0.85 - - - - - - - 0.850 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
84. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.85 - - - - - - - 0.850 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
85. gcdhl gcdhl 38 0.85 - - - - - - - 0.850 -
86. rint1 ENSDARG00000005547 898 0.85 - - - - - - - 0.850 - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
87. ripk4 ENSDARG00000043211 775 0.85 - - - - - - - 0.850 - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
88. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.849 - - - - - - - 0.849 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
89. TMEM116 TMEM116 96 0.849 - - - - - - - 0.849 -
90. cx28.8 ENSDARG00000071042 62 0.849 - - - - - - - 0.849 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
91. dnm1b ENSDARG00000009281 219 0.849 0.849 - - - - - - - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
92. CR376848.1 ENSDARG00000115549 149 0.848 - - - - - - - 0.848 - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
93. si:dkey-10g2.5 si:dkey-10g2.5 72 0.848 - - - - - - - 0.848 -
94. si:dkey-29n10.3 si:dkey-29n10.3 66 0.848 - - - - - - - 0.848 -
95. MYLK4 MYLK4 180 0.848 - - - - - - - 0.848 -
96. CABZ01114089.1 CABZ01114089.1 127 0.848 - - - - - - - 0.848 -
97. diras1a ENSDARG00000028066 126 0.847 - 0.847 - - - - - - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
98. sema3fb ENSDARG00000055373 834 0.847 - 0.847 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
99. SH2B2 ENSDARG00000090421 245 0.847 - - - - - - - 0.847 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
100. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.846 - - - - - - - 0.846 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]

There are 959 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA