Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptpra

Gene Name Gene ID Reads Annotation
ptpra ENSDARG00000001769, ENSDARG00000114615 1279 protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]










Genes with expression patterns similar to ptpra

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
2. rarab ENSDARG00000034893, ENSDARG00000111757 2151 2.337 - 0.759 - - - 0.753 0.825 - - retinoic acid receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-980526-72]
3. pfkfb4l pfkfb4l 2539 1.629 - - - - - 0.768 0.861 - -
4. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.603 - 0.867 - 0.736 - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
5. cdk6 ENSDARG00000070228 1778 1.6 - - - - - 0.837 0.763 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
6. RNF130 ENSDARG00000089767 559 1.579 - 0.790 - - - - 0.789 - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
7. atp6v1c1a ENSDARG00000023967 4611 1.568 - - - - - 0.755 0.813 - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
8. smo ENSDARG00000002952 6411 1.541 - - - - - 0.789 0.752 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
9. six2a ENSDARG00000058004, ENSDARG00000115214 414 1.535 - 0.756 - 0.779 - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
10. wtap ENSDARG00000042642 1779 1.534 - 0.820 - - - - - - 0.714 WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
11. cmc1 ENSDARG00000103670 1197 1.518 - 0.743 - 0.775 - - - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
12. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 1.518 - 0.806 - - - - 0.712 - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
13. map7d1b ENSDARG00000104701 1655 1.516 - 0.810 - - - 0.706 - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
14. ubtf ENSDARG00000035066 4070 1.516 - - - - - - 0.750 - 0.766 upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
15. sorbs1 ENSDARG00000103435 2297 1.515 - - - 0.716 - - 0.799 - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
16. znf319 znf319 3027 1.514 - - - - - - 0.791 - 0.723
17. ccdc22 ENSDARG00000052379 2276 1.514 - 0.793 - - - 0.721 - - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
18. fam21c 1768 1.51 - 0.764 - - - - 0.746 - - family with sequence similarity 21, member C, transcript variant X6
19. mri1 ENSDARG00000075754 2567 1.501 - 0.760 - - - 0.741 - - - methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
20. dctd ENSDARG00000036990 2168 1.501 - 0.753 - - - - 0.748 - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
21. FRRS1_1 FRRS1_1 831 1.496 - 0.725 - - - - 0.771 - -
22. wu:fu71h07 ENSDARG00000103860 558 1.495 - 0.752 - - - - 0.743 - - wu:fu71h07 [Source:ZFIN;Acc:ZDB-GENE-050302-121]
23. gnb2 ENSDARG00000035357, ENSDARG00000105310 1523 1.492 - 0.756 - - - - 0.736 - - guanine nucleotide binding protein (G protein), beta polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050320-65]
24. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.491 - - - - - 0.754 0.737 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
25. eif4e3 ENSDARG00000005078 1624 1.49 - - - 0.750 - 0.740 - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
26. ccdc28a ENSDARG00000022983, ENSDARG00000091471 1449 1.485 - 0.760 - - - - 0.725 - - coiled-coil domain containing 28A [Source:ZFIN;Acc:ZDB-GENE-030131-5007]
27. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 1.477 - 0.731 - 0.746 - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
28. wdr37 ENSDARG00000074611 468 1.476 - 0.752 - - - 0.724 - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
29. mapk13 ENSDARG00000058470 1001 1.472 - 0.731 - - - - 0.741 - - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
30. ankrd13c ENSDARG00000103831 3593 1.472 - - - - - 0.734 - - 0.738 ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
31. ppp2r2a ppp2r2a 5785 1.458 - 0.729 - - - - 0.729 - -
32. dtnbp1a ENSDARG00000055115 976 1.454 - - - - - 0.745 0.709 - - dystrobrevin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1036]
33. tmem57a 861 1.449 - - - 0.720 - - 0.729 - - transmembrane protein 57a
34. ctnnb1 ENSDARG00000014571 12004 1.446 - - 0.717 - - 0.729 - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
35. bcat2 ENSDARG00000054849 4317 1.442 - 0.725 - - - - 0.717 - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
36. fkbp7 ENSDARG00000010962 2986 1.441 - 0.735 - - - - 0.706 - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
37. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.437 - 0.715 - - - - 0.722 - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
38. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.436 - - - - - 0.702 0.734 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
39. kifc1 ENSDARG00000001558 6658 1.435 - - - - - 0.728 0.707 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
40. pak4 ENSDARG00000018110 1962 1.434 - - - 0.733 - 0.701 - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
41. si:dkeyp-113d7.10 ENSDARG00000092359 1585 1.434 - - - - - 0.713 - 0.721 - si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
42. brd2a ENSDARG00000022280 3481 1.431 - - - - - 0.702 0.729 - - bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
43. srsf6a ENSDARG00000013729 8576 1.429 - - - - - 0.726 0.703 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
44. xrn2 ENSDARG00000101900 2875 1.426 - - - - - - 0.718 - 0.708 5'-3' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2874]
45. zfp36l1a ENSDARG00000016154 4305 1.425 - - 0.715 - - - 0.710 - - zinc finger protein 36, C3H type-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9860]
46. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.408 - 0.704 - - - - 0.704 - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
47. slc48a1b ENSDARG00000026109 1427 0.911 - 0.911 - - - - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
48. rab11al ENSDARG00000014340 2116 0.907 - 0.907 - - - - - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
49. ppap2b ppap2b 2900 0.891 - - - - - - 0.891 - -
50. si:dkey-67c22.2 ENSDARG00000055389 6410 0.89 - 0.890 - - - - - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
51. bin2b ENSDARG00000010255 2649 0.889 - 0.889 - - - - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
52. hspa5 ENSDARG00000103846 4661 0.878 - - - - - - 0.878 - - heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
53. hmox2a ENSDARG00000055101, ENSDARG00000114695 815 0.875 - 0.875 - - - - - - - heme oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-040914-13]
54. sec22ba ENSDARG00000030108 1273 0.873 - 0.873 - - - - - - - SEC22 homolog B, vesicle trafficking protein a [Source:ZFIN;Acc:ZDB-GENE-010724-3]
55. nubp2 ENSDARG00000055653 803 0.869 - 0.869 - - - - - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
56. cercam ENSDARG00000079049, ENSDARG00000109573 2228 0.869 - 0.869 - - - - - - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
57. myo6a ENSDARG00000044016 847 0.869 - 0.869 - - - - - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
58. tmem248 ENSDARG00000018825 1560 0.866 - - - - - - 0.866 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
59. abhd16a ENSDARG00000078929 1115 0.866 - 0.866 - - - - - - - abhydrolase domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-010601-2]
60. c1d ENSDARG00000021112 2839 0.866 - 0.866 - - - - - - - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
61. zgc:165582 ENSDARG00000074362 198 0.863 - 0.863 - - - - - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
62. UBE2D2 ENSDARG00000043484 11723 0.862 - - - - - 0.862 - - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
63. PDZD8 ENSDARG00000088699 844 0.862 - 0.862 - - - - - - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
64. rpa3 ENSDARG00000002613 2923 0.858 - 0.858 - - - - - - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
65. exoc3l4 ENSDARG00000058180 923 0.857 - 0.857 - - - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
66. ptbp2a ENSDARG00000101947 1921 0.855 - 0.855 - - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
67. selt1b 1396 0.854 - 0.854 - - - - - - - selenoprotein T, 1b
68. si:ch211-183d21.1 ENSDARG00000092499 1071 0.853 - - - - - - 0.853 - - si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]
69. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 0.852 - 0.852 - - - - - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
70. timm23 timm23 2712 0.851 - 0.851 - - - - - - -
71. pnp5b ENSDARG00000099802 551 0.851 - - - - - - 0.851 - - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
72. rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 0.847 - 0.847 - - - - - - - regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]
73. usp19 ENSDARG00000004132 811 0.847 - - - - - - 0.847 - - ubiquitin specific peptidase 19 [Source:ZFIN;Acc:ZDB-GENE-030131-3055]
74. RELL1 ENSDARG00000018312 579 0.847 - 0.847 - - - - - - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
75. slmapa ENSDARG00000054458 966 0.846 - 0.846 - - - - - - - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
76. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 0.845 - - - - - - 0.845 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
77. aup1 ENSDARG00000092609 2431 0.845 - 0.845 - - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
78. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 0.845 - - - - - - 0.845 - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
79. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.844 - 0.844 - - - - - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
80. si:ch211-173m16.2 ENSDARG00000093284 186 0.843 - 0.843 - - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
81. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.843 - 0.843 - - - - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
82. ncor2 ENSDARG00000000966 3352 0.843 - - - - - 0.843 - - - nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
83. tmem50a ENSDARG00000015757 3244 0.842 - 0.842 - - - - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
84. sec22a ENSDARG00000078328 1207 0.841 - - - 0.841 - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
85. dcun1d2 dcun1d2 1721 0.841 - 0.841 - - - - - - -
86. HOOK3 ENSDARG00000114329 1980 0.84 - 0.840 - - - - - - - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
87. sash1a ENSDARG00000007179 2497 0.84 - - - - - - 0.840 - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
88. rfc2 ENSDARG00000014274 1533 0.839 - 0.839 - - - - - - - replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]
89. soul3 ENSDARG00000102257 939 0.839 - 0.839 - - - - - - - heme-binding protein soul3 [Source:ZFIN;Acc:ZDB-GENE-060825-287]
90. zgc:92380 ENSDARG00000041339 1867 0.839 - 0.839 - - - - - - - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
91. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 0.838 - 0.838 - - - - - - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
92. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 0.838 - 0.838 - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
93. srsf9 ENSDARG00000008097 2405 0.836 - - - - - 0.836 - - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
94. syne2b ENSDARG00000053484 9225 0.835 - 0.835 - - - - - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
95. usp37 ENSDARG00000040990 637 0.835 - - - 0.835 - - - - - ubiquitin specific peptidase 37 [Source:ZFIN;Acc:ZDB-GENE-061013-802]
96. TMEM185A TMEM185A 5505 0.835 - - - - - - 0.835 - -
97. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 0.835 - - - - - - 0.835 - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
98. afap1 ENSDARG00000055284 730 0.835 - 0.835 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
99. fos fos 817 0.834 - 0.834 - - - - - - -
100. bhlhe40 ENSDARG00000004060 2107 0.834 - 0.834 - - - - - - - basic helix-loop-helix family, member e40 [Source:ZFIN;Acc:ZDB-GENE-030131-3133]

There are 1045 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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