Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptpn4a

Gene Name Gene ID Reads Annotation
ptpn4a ENSDARG00000000631, ENSDARG00000112876 626 protein tyrosine phosphatase, non-receptor type 4a [Source:ZFIN;Acc:ZDB-GENE-030616-449]










Genes with expression patterns similar to ptpn4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptpn4a ENSDARG00000000631, ENSDARG00000112876 626 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, non-receptor type 4a [Source:ZFIN;Acc:ZDB-GENE-030616-449]
2. mrps2 ENSDARG00000103198 2410 1.638 - - - - - - 0.781 0.857 - mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
3. 5_8S_rRNA_1 5_8S_rRNA_1 563 1.608 - 0.752 - - - - 0.856 - -
4. si:rp71-36a1.2 ENSDARG00000093686 81 1.573 - - - - - 0.713 - 0.860 - si:rp71-36a1.2 [Source:ZFIN;Acc:ZDB-GENE-050208-646]
5. mrps33 ENSDARG00000020015 3551 1.562 - - - - - - 0.784 0.778 - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
6. gadd45ba ENSDARG00000027744 482 1.531 - - - - - 0.786 0.745 - - growth arrest and DNA-damage-inducible, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1971]
7. ptprb ENSDARG00000076624 323 1.506 - 0.714 - - - - 0.792 - - protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]
8. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.483 0.708 - - - - - - 0.775 - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
9. raraa ENSDARG00000056783 1404 1.465 - 0.723 - - - 0.742 - - - retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]
10. prickle3 ENSDARG00000073996 840 1.461 - - - - - - 0.711 0.750 - prickle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-081105-86]
11. clic2 ENSDARG00000010625, ENSDARG00000110125, ENSDARG00000115320 273 1.451 - - - - - - 0.730 0.721 - chloride intracellular channel 2 [Source:ZFIN;Acc:ZDB-GENE-040718-299]
12. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.449 - - - - - - 0.703 0.746 - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
13. eif2b4 ENSDARG00000014004 2213 0.931 - - - - - - - 0.931 - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
14. grk5 ENSDARG00000032801 490 0.904 - - - - - - - 0.904 - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
15. irf2bp1 ENSDARG00000005468 1362 0.899 - 0.899 - - - - - - - interferon regulatory factor 2 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050420-389]
16. polm ENSDARG00000103470 49 0.894 - - - - - - - 0.894 - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
17. CR318603.2 ENSDARG00000105536 199 0.891 - - - - - - - 0.891 -
18. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 0.89 - - - - - - - 0.890 -
19. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 0.889 - - - - - - - 0.889 - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
20. flt3 ENSDARG00000058503 32 0.889 - - - - - - - 0.889 - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
21. si:ch211-238g23.1 ENSDARG00000055746 23 0.889 - - - - - - - 0.889 - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
22. si:dkey-85k15.11 ENSDARG00000090817 20 0.889 - - - - - - - 0.889 - si:dkey-85k15.11 [Source:ZFIN;Acc:ZDB-GENE-100922-4]
23. MVD MVD 32 0.888 - - - - - - - 0.888 -
24. CSMD3 CSMD3 0 0.888 - - - - - - - 0.888 -
25. styxl1 ENSDARG00000026338 29 0.888 - - - - - - - 0.888 - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
26. CCDC141 ENSDARG00000095675 94 0.888 - - - - - - - 0.888 - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
27. CABZ01072534.1 CABZ01072534.1 69 0.887 - - - - - - - 0.887 -
28. BX649448.1 ENSDARG00000079441 65 0.887 - - - - - - - 0.887 -
29. nrg2b ENSDARG00000086585 100 0.887 - - - - - - - 0.887 - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
30. CABZ01006828.1 CABZ01006828.1 410 0.886 - - - - - - - 0.886 -
31. zgc:112146 ENSDARG00000104829 34 0.886 - - - - - - - 0.886 - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
32. BX004880.2 BX004880.2 83 0.886 - - - - - - - 0.886 -
33. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 0.886 - - - - - - - 0.886 - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
34. si:ch211-207m11.2 si:ch211-207m11.2 63 0.886 - - - - - - - 0.886 -
35. htr3a ENSDARG00000089212 51 0.886 - - - - - - - 0.886 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
36. chpfb ENSDARG00000078037 30 0.885 - - - - - - - 0.885 - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
37. nebl ENSDARG00000021200 40 0.885 - - - - - - - 0.885 - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
38. ZNF337_15 ZNF337_15 135 0.885 - - - - - - - 0.885 -
39. btbd3b ENSDARG00000087517 107 0.884 - - - - - - - 0.884 - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
40. elnb ENSDARG00000069017 744 0.883 - - - - - - - 0.883 - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
41. sap30bp ENSDARG00000031261 1348 0.883 - - - - - 0.883 - - - SAP30 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-457]
42. si:ch211-53m15.1 si:ch211-53m15.1 28 0.883 - - - - - - - 0.883 -
43. tatdn3 ENSDARG00000054076 130 0.882 - - - - - - - 0.882 - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
44. si:ch211-71m22.1 ENSDARG00000058638 169 0.882 - - - - - - - 0.882 - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
45. zgc:110224 ENSDARG00000032263 147 0.881 - - - - - - - 0.881 - zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120]
46. CABZ01117079.1 CABZ01117079.1 123 0.881 - - - - - - - 0.881 -
47. cant1b_1 ENSDARG00000102977 447 0.881 - - - - - - - 0.881 - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
48. GPR153 ENSDARG00000087601 48 0.879 - - - - - - - 0.879 - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
49. parla ENSDARG00000039310 360 0.878 - - - - - - - 0.878 - presenilin associated, rhomboid-like a [Source:ZFIN;Acc:ZDB-GENE-050327-8]
50. cbx8a_1 ENSDARG00000087327 109 0.877 - - - - - - - 0.877 - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
51. FGL1 ENSDARG00000105380 147 0.877 - - - - - - - 0.877 - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
52. si:dkey-50i6.5 ENSDARG00000101320 95 0.877 - - - - - - - 0.877 - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
53. C4H12orf5 C4H12orf5 158 0.877 - - - - - - - 0.877 -
54. si:rp71-1c10.11 ENSDARG00000096721 39 0.877 - - - - - - - 0.877 - si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61]
55. trpc1 ENSDARG00000061203 62 0.877 - - - - - - - 0.877 - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
56. tuft1b ENSDARG00000071010 909 0.876 - - - - - - - 0.876 - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
57. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 0.876 - - - - - - - 0.876 - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
58. avpr2ab ENSDARG00000029219 97 0.875 - - - - - - - 0.875 - arginine vasopressin receptor 2a, duplicate b [Source:ZFIN;Acc:ZDB-GENE-110411-48]
59. dhrs3a ENSDARG00000044982, ENSDARG00000109521 146 0.875 - - - - - - - 0.875 - dehydrogenase/reductase (SDR family) member 3a [Source:ZFIN;Acc:ZDB-GENE-040801-217]
60. mir301c 84 0.874 - - - - - - - 0.874 - microRNA 301c
61. zgc:173575 ENSDARG00000078281, ENSDARG00000115456 190 0.874 - - - - - - - 0.874 - zgc:173575 [Source:ZFIN;Acc:ZDB-GENE-080218-25]
62. slco4a1 ENSDARG00000075948 74 0.874 - - - - - - - 0.874 - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
63. atg9b ENSDARG00000055292 155 0.874 - - - - - - - 0.874 - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
64. ubox5 ENSDARG00000058563 161 0.871 - - - - - - - 0.871 - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
65. scp2a ENSDARG00000012194 614 0.871 - - - - - - - 0.871 - sterol carrier protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1846]
66. CABZ01086041.1 ENSDARG00000019442 472 0.871 - - - - - - - 0.871 - angiomotin like 1 [Source:NCBI gene;Acc:101884950]
67. UBL7 UBL7 197 0.871 - - - - - - - 0.871 -
68. slc5a6 slc5a6 224 0.87 - - - - - - - 0.870 -
69. tagln ENSDARG00000045408 48 0.87 - - - - - - - 0.870 - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
70. mamdc1 mamdc1 156 0.869 - - - - - - - 0.869 -
71. gnb5b ENSDARG00000055377 98 0.869 - - - - - - - 0.869 - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
72. si:ch1073-357b18.4 ENSDARG00000096602 121 0.868 - - - - - - - 0.868 - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
73. soul5 ENSDARG00000075015 118 0.867 - - - - - - - 0.867 - heme-binding protein soul5 [Source:ZFIN;Acc:ZDB-GENE-110718-2]
74. nrd1 nrd1 324 0.867 - - - - - - - 0.867 -
75. si:dkey-122c11.9 si:dkey-122c11.9 227 0.867 - - - - - - - 0.867 -
76. slc17a9b ENSDARG00000011049 231 0.866 - - - - - - - 0.866 - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
77. h2afy ENSDARG00000099329 286 0.866 - - - - - - - 0.866 - H2A histone family, member Y [Source:ZFIN;Acc:ZDB-GENE-060421-4796]
78. xirp1 ENSDARG00000030722 1486 0.866 - - - - - - - 0.866 - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
79. mtpap ENSDARG00000076155, ENSDARG00000112828 272 0.866 - - - - - - - 0.866 - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
80. ZNF337_6 ZNF337_6 898 0.866 - - - - - - - 0.866 -
81. kdelc1 ENSDARG00000031971, ENSDARG00000109619, ENSDARG00000112803 249 0.865 - - - - - - - 0.865 - KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-878]
82. mkrn2 ENSDARG00000007630 127 0.865 - - - - - - - 0.865 - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
83. TONSL ENSDARG00000071294, ENSDARG00000116200 285 0.864 - - - - - - - 0.864 - tonsoku-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-041111-230]
84. PAXBP1 ENSDARG00000062361 626 0.863 - 0.863 - - - - - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
85. tti1 ENSDARG00000004114 203 0.863 - - - - - - - 0.863 - TELO2 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-080819-3]
86. slc39a1 ENSDARG00000058257, ENSDARG00000112079 293 0.863 - - - - - - - 0.863 - solute carrier family 39 (zinc transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9917]
87. thyn1 ENSDARG00000042659, ENSDARG00000113223 459 0.863 - - - - - - - 0.863 - thymocyte nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1585]
88. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.862 - - - - - - - 0.862 - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
89. CASS4 ENSDARG00000006775 760 0.862 - - - - - - - 0.862 - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
90. GTPBP8 ENSDARG00000075033 231 0.862 - - - - - - - 0.862 - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
91. CU075695.3 CU075695.3 253 0.861 - - - - - 0.861 - - -
92. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.86 - - - - - - - 0.860 - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
93. cdkn3 ENSDARG00000039130 1051 0.858 - - - - - - - 0.858 - cyclin-dependent kinase inhibitor 3 [Source:ZFIN;Acc:ZDB-GENE-060427-2]
94. SSX2IP SSX2IP 316 0.857 - - - - - - - 0.857 -
95. inhbaa ENSDARG00000012671 207 0.857 - - - - - - - 0.857 - inhibin subunit beta Aa [Source:ZFIN;Acc:ZDB-GENE-000210-21]
96. got2a ENSDARG00000041068, ENSDARG00000114282 693 0.856 - - - - - - - 0.856 - glutamic-oxaloacetic transaminase 2a, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2703]
97. nr1d2b ENSDARG00000009594 1144 0.854 - - - - - - - 0.854 - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
98. CABZ01044943.1 CABZ01044943.1 309 0.852 - - - - - - - 0.852 -
99. layna ENSDARG00000035169 515 0.852 - - - - - - - 0.852 - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
100. b4galt4 ENSDARG00000104042 1479 0.851 - - - - - - - 0.851 - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041114-103]

There are 617 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA