Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptpn13

Gene Name Gene ID Reads Annotation
ptpn13 ENSDARG00000103699 2866 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]










Genes with expression patterns similar to ptpn13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptpn13 ENSDARG00000103699 2866 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
2. NAIF1_1 NAIF1_1 1336 2.605 0.749 - 0.971 - - - - 0.885 -
3. CABZ01038494.1 ENSDARG00000088258 908 2.524 - - - - - 0.776 0.811 0.937 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
4. znf395a ENSDARG00000060113 3874 2.492 - 0.980 - - - 0.741 - 0.771 - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
5. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 2.491 - 0.952 - - - 0.762 - - 0.777 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
6. CD99L2 ENSDARG00000056722 5588 2.457 - 0.816 - - - - 0.750 0.891 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
7. TMEM185A TMEM185A 5505 2.392 0.702 - 0.927 - - 0.763 - - -
8. cdc42ep4b ENSDARG00000045036 1295 2.277 0.705 - - - - - 0.714 - 0.858 CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
9. serpinh1a ENSDARG00000075954 6488 2.257 - 0.729 - - - - 0.741 - 0.787 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
10. si:ch211-51e12.7 ENSDARG00000045914 9598 2.246 - 0.738 0.808 - - - - - 0.700 si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
11. otub1a ENSDARG00000055536 2892 1.93 - 0.992 - - - - - - 0.938 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
12. KIF2A ENSDARG00000043571 1560 1.925 - 0.989 - - - - - - 0.936 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
13. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.908 - 0.939 0.969 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
14. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.9 - 0.981 0.919 - - - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
15. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.895 - - 0.960 - - - - - 0.935 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
16. sec24d ENSDARG00000045946 2395 1.895 - 0.950 0.945 - - - - - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
17. pdia5 ENSDARG00000069242 3576 1.895 - 0.986 0.909 - - - - - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
18. fkbp8 ENSDARG00000001734 1709 1.894 - - 0.948 - - - - - 0.946 FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
19. phf12a ENSDARG00000074303 1025 1.891 - - 0.966 - - - - 0.925 - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
20. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.89 - - - - - - - 0.939 0.951 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
21. crb2a ENSDARG00000060106 1307 1.883 - - 0.964 - - - - 0.919 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
22. gfer ENSDARG00000070061 1119 1.881 - 0.988 0.893 - - - - - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
23. wwtr1 ENSDARG00000067719 3484 1.881 - - - - - - - 0.918 0.963 WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
24. cmip ENSDARG00000062933 4521 1.879 - - 0.935 - - - - - 0.944 c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
25. ppp6r3 ENSDARG00000013379 2912 1.863 - - 0.961 - - - - 0.902 - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
26. GATAD2B ENSDARG00000005834 3855 1.86 - 0.988 - - - - - 0.872 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
27. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.858 - - - - - - - 0.923 0.935 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
28. lpl ENSDARG00000087697 2578 1.851 - - 0.945 - - - - 0.906 - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
29. phc2b_1 ENSDARG00000013224 1316 1.849 - - 0.960 - - - - 0.889 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
30. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.846 - 0.961 - - - - - 0.885 - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
31. rab5aa ENSDARG00000018602 8947 1.837 - - 0.898 - - - - 0.939 - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
32. maf1 ENSDARG00000013122 3365 1.812 - - - - - - - 0.869 0.943 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
33. nrd1 nrd1 324 1.804 0.816 0.988 - - - - - - -
34. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.78 - 0.815 0.965 - - - - - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
35. wdr82 ENSDARG00000014083 3159 1.778 0.844 - 0.934 - - - - - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
36. ctnnbip1 ENSDARG00000038954 2519 1.757 - - 0.950 - - - - 0.807 - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
37. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.753 - - 0.906 - - - - - 0.847 solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
38. slc1a5 ENSDARG00000099186 7580 1.747 - - 0.915 - - - - - 0.832 solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
39. ppp1r8 ppp1r8 310 1.743 0.810 - - - - - - 0.933 -
40. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.741 - 0.990 - - - 0.751 - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
41. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.731 - 0.980 - - - 0.751 - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
42. impdh1b ENSDARG00000029524 7472 1.725 - - 0.878 - - - - 0.847 - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
43. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.719 - 0.947 0.772 - - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
44. col16a1 ENSDARG00000009194 5600 1.709 - - 0.901 - - - - - 0.808 collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
45. klf3 ENSDARG00000015495, ENSDARG00000114143 1640 1.707 - 0.963 - - - - 0.744 - - Kruppel-like factor 3 (basic) [Source:ZFIN;Acc:ZDB-GENE-011116-1]
46. tmem45b ENSDARG00000056239 2395 1.701 - - 0.955 - - - 0.746 - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
47. ghitm 1443 1.7 - - - - - - 0.761 0.939 - growth hormone inducible transmembrane protein
48. gyltl1b 1368 1.699 - 0.977 - - - - 0.722 - - glycosyltransferase-like 1b, transcript variant X3
49. nt5c2a ENSDARG00000039399 3062 1.698 - - - - - - 0.793 0.905 - 5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]
50. ubr2 ENSDARG00000070164 3960 1.696 - - 0.961 - - 0.735 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
51. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.696 - - 0.959 - - - 0.737 - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
52. elmo1 ENSDARG00000098753 6966 1.695 - - - - - - - 0.889 0.806 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
53. max ENSDARG00000024844 6035 1.694 - - 0.858 - - - - 0.836 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
54. slc7a8a ENSDARG00000075831 2987 1.694 - - 0.942 - - - 0.752 - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
55. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 1.691 - - - - - - 0.749 - 0.942 RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
56. fbxl5 ENSDARG00000043046 1403 1.69 - - - - - - 0.762 0.928 - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
57. CU695232.1 ENSDARG00000098286 1266 1.688 0.751 - - - - - - - 0.937 zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
58. nme3 ENSDARG00000100990 3889 1.679 - - - - - - 0.754 0.925 - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
59. boc ENSDARG00000074335 4832 1.679 - - - - - - - 0.884 0.795 BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
60. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.678 - 0.947 - - - - - 0.731 - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
61. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.677 - - 0.861 - - - - 0.816 - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
62. gsg1l ENSDARG00000037390 181 1.673 0.738 - - - - - - - 0.935 gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
63. eef1db ENSDARG00000030053 5185 1.673 - 0.934 - - - - - 0.739 - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
64. inip ENSDARG00000028523 1925 1.672 - - 0.967 - - 0.705 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
65. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.671 - 0.959 - - - - - - 0.712 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
66. tm2d3 ENSDARG00000076618 2310 1.67 - - 0.946 - - - - - 0.724 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
67. ldb1a ENSDARG00000010137 3035 1.668 - - 0.932 - - 0.736 - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
68. cpsf3 ENSDARG00000027649 6897 1.667 - - 0.794 - - - - - 0.873 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
69. usp8 ENSDARG00000063719 643 1.665 - - 0.962 - - - 0.703 - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
70. ccne2 ENSDARG00000098529 4695 1.664 - - 0.914 - - - - 0.750 - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
71. si:dkey-57c15.9 si:dkey-57c15.9 665 1.664 - - - - - 0.717 - - 0.947
72. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.663 0.727 - - - - - - - 0.936 inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
73. arih2 ENSDARG00000012848 7087 1.662 - - - - - 0.717 - 0.945 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
74. bcl9 ENSDARG00000036687 1124 1.662 - - - - - 0.716 - - 0.946 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
75. slc25a3b ENSDARG00000025566 32264 1.652 - - 0.838 - - - - 0.814 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
76. aldh4a1 ENSDARG00000038207 4639 1.65 - 0.899 - - - - 0.751 - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
77. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.649 - 0.912 - - - 0.737 - - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
78. atp6v1d ENSDARG00000011175 8331 1.648 - - - - - 0.706 - 0.942 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
79. kpna4 ENSDARG00000023190 2505 1.648 - - - - - - 0.709 - 0.939 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
80. psmd14 ENSDARG00000063100 15711 1.647 - - 0.836 - - - - - 0.811 proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
81. ndnl2 ENSDARG00000058212 1042 1.646 0.721 - - - - - - 0.925 - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
82. sec62 ENSDARG00000019951 3724 1.643 - - - - - - 0.753 0.890 - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
83. pi4k2b ENSDARG00000013881 1337 1.639 - - - - - - 0.703 - 0.936 phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
84. foxp1b ENSDARG00000014181 2594 1.634 - - - - - 0.744 - 0.890 - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
85. si:ch211-161h7.4 ENSDARG00000087238 4399 1.634 - - - - - - 0.834 0.800 - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
86. wasf3 wasf3 3287 1.629 - - 0.705 - - - - - 0.924
87. b2ml ENSDARG00000015887 1060 1.629 - - - - - 0.719 - 0.910 - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
88. ip6k2 ip6k2 3926 1.629 - - - - - - 0.714 0.915 -
89. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.616 - - - - - - 0.704 - 0.912 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
90. zcrb1 ENSDARG00000045691 1741 1.615 - - - - 0.725 - - - 0.890 zinc finger CCHC-type and RNA binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-041210-114]
91. ivns1abpb ENSDARG00000013946 1972 1.607 - - - - - 0.723 - 0.884 - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
92. atp6v1e1b ENSDARG00000030694 5452 1.604 - 0.741 - - - - - 0.863 - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
93. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.59 - - - - - 0.726 - 0.864 - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
94. si:dkey-261h17.1 ENSDARG00000095268 11403 1.589 - 0.871 - - - - - - 0.718 si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
95. zgc:154075 ENSDARG00000067630 284 1.588 0.747 - - - - - 0.841 - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
96. kifc1 ENSDARG00000001558 6658 1.582 - 0.742 0.840 - - - - - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
97. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.576 - - - - - - 0.709 0.867 - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
98. ube2h ENSDARG00000000019 9900 1.568 - 0.768 - - - - - - 0.800 ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
99. minos1 ENSDARG00000101619 5273 1.56 - - 0.848 - - - - 0.712 - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
100. BX682552.2 BX682552.2 1427 1.556 - - - - - 0.718 - 0.838 -

There are 1606 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA