Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptpn11b

Gene Name Gene ID Reads Annotation
ptpn11b ENSDARG00000012340, ENSDARG00000114232 604 protein tyrosine phosphatase, non-receptor type 11, b [Source:ZFIN;Acc:ZDB-GENE-040426-1158]










Genes with expression patterns similar to ptpn11b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptpn11b ENSDARG00000012340, ENSDARG00000114232 604 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, non-receptor type 11, b [Source:ZFIN;Acc:ZDB-GENE-040426-1158]
2. lmo2 ENSDARG00000095019 1098 1.544 - 0.702 - - - - 0.842 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
3. she ENSDARG00000087956 941 1.503 - 0.793 - - - - 0.710 - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
4. nog1 ENSDARG00000058819 501 1.484 - 0.701 - - - - 0.783 - - noggin 1 [Source:ZFIN;Acc:ZDB-GENE-991206-8]
5. ppp1r14c ENSDARG00000077341 1587 1.479 - 0.708 - - - - 0.771 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
6. pxk ENSDARG00000063195 851 1.474 - 0.729 - - - - 0.745 - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
7. spata18 ENSDARG00000052343 216 1.466 - 0.704 - - - - 0.762 - - spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]
8. cgnl1 ENSDARG00000015805 856 1.465 - 0.729 - - - - 0.736 - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
9. MYADM ENSDARG00000086815 659 1.452 - 0.716 - - - - 0.736 - - myeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]
10. SURF2 ENSDARG00000112476 592 1.447 - 0.736 - - - - 0.711 - - surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
11. timm8b ENSDARG00000055708 7291 1.436 - 0.702 - - - - 0.734 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
12. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 1.433 - 0.715 - - - - 0.718 - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
13. cdkal1 ENSDARG00000104848 2102 1.428 - 0.705 - - - 0.723 - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
14. pdcd2l ENSDARG00000002754 417 0.931 - - - - - - 0.931 - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
15. mrpl54 ENSDARG00000071468 2715 0.904 - - - - - - 0.904 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
16. arap3 ENSDARG00000076801 725 0.886 - - - - - - 0.886 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
17. mdm1 ENSDARG00000045675 64 0.881 - - - - - - 0.881 - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
18. ap4s1 ENSDARG00000054220 346 0.881 - 0.881 - - - - - - - adaptor related protein complex 4 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-030616-404]
19. rnf139 ENSDARG00000036929 494 0.877 - 0.877 - - - - - - - ring finger protein 139 [Source:ZFIN;Acc:ZDB-GENE-080401-4]
20. CABZ01018247.1 CABZ01018247.1 609 0.865 - - - - - - 0.865 - -
21. rtn4ip1 ENSDARG00000031366 388 0.863 - - - - - - 0.863 - - reticulon 4 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1314]
22. mpx ENSDARG00000019521 562 0.851 - - - - - - 0.851 - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
23. vcanb ENSDARG00000009401 3611 0.851 - 0.851 - - - - - - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
24. NOG NOG 324 0.847 - - - - - - 0.847 - -
25. TPC3 TPC3 416 0.844 - - - - - - 0.844 - -
26. slc35b4 ENSDARG00000071087 1030 0.842 - - - 0.842 - - - - - solute carrier family 35, member B4 [Source:ZFIN;Acc:ZDB-GENE-030131-2457]
27. chchd4 chchd4 785 0.839 - - - - - - 0.839 - -
28. slc20a1a ENSDARG00000020114, ENSDARG00000113616 503 0.832 - - - - - - 0.832 - - solute carrier family 20, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2217]
29. hccsa hccsa 869 0.832 - - - - - - 0.832 - -
30. rhogb ENSDARG00000004301 358 0.831 - - - - - 0.831 - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
31. epas1b ENSDARG00000057671, ENSDARG00000113561, ENSDARG00000115742 1306 0.826 - 0.826 - - - - - - - endothelial PAS domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-060607-11]
32. vil1 ENSDARG00000040466 81 0.825 - - - - - - 0.825 - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
33. FP236168.1 FP236168.1 150 0.825 - - - - - 0.825 - - -
34. SAYSD1 SAYSD1 149 0.825 - - - - - 0.825 - - -
35. myog ENSDARG00000009438 2368 0.824 - 0.824 - - - - - - - myogenin [Source:ZFIN;Acc:ZDB-GENE-980526-265]
36. otud3 ENSDARG00000022648 263 0.824 - - - 0.824 - - - - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
37. TNRC18 ENSDARG00000077052 1095 0.824 - 0.824 - - - - - - - trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
38. mob1bb ENSDARG00000012953 873 0.824 - 0.824 - - - - - - - MOB kinase activator 1Bb [Source:ZFIN;Acc:ZDB-GENE-050522-58]
39. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.822 - - - - - - 0.822 - - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
40. sod2 ENSDARG00000042644 1382 0.822 - - - - - - 0.822 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
41. zgc:100832 ENSDARG00000012035 462 0.82 - - - - - - 0.820 - - zgc:100832 [Source:ZFIN;Acc:ZDB-GENE-040801-53]
42. st3gal3a ENSDARG00000015374 2360 0.819 - 0.819 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1322]
43. si:ch73-127m5.2 ENSDARG00000096797 429 0.817 - 0.817 - - - - - - - si:ch73-127m5.2 [Source:ZFIN;Acc:ZDB-GENE-030131-1052]
44. CU633479.5 ENSDARG00000114818 1815 0.817 - 0.817 - - - - - - -
45. tnfaip8l3 ENSDARG00000088709 345 0.816 - - - - - - 0.816 - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
46. adprh ENSDARG00000040712 298 0.814 - 0.814 - - - - - - - ADP-ribosylarginine hydrolase [Source:ZFIN;Acc:ZDB-GENE-040801-190]
47. trpm1b ENSDARG00000103476 369 0.814 - - - - - - 0.814 - - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
48. ptprb ENSDARG00000076624 323 0.813 - 0.813 - - - - - - - protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]
49. fli1a ENSDARG00000054632 330 0.813 - - - - - - 0.813 - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
50. eef2k ENSDARG00000035835 2906 0.811 - 0.811 - - - - - - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
51. snw1 ENSDARG00000091563 263 0.811 0.811 - - - - - - - - SNW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-571]
52. npsn ENSDARG00000010423 768 0.808 - - - - - - 0.808 - - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
53. mrpl20 ENSDARG00000090462 791 0.807 - 0.807 - - - - - - - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
54. pmela ENSDARG00000091298 5179 0.807 - - - - - - 0.807 - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
55. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 0.804 - - - - - - 0.804 - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
56. si:dkey-182g1.5 si:dkey-182g1.5 22 0.804 - - - - - - 0.804 - -
57. ednrb1a ednrb1a 1255 0.802 - - - - - - 0.802 - -
58. noc3l ENSDARG00000002487 230 0.802 - - - - - - 0.802 - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
59. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 0.802 - 0.802 - - - - - - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
60. HS1BP3 ENSDARG00000034222 304 0.801 - - - - - 0.801 - - - HCLS1 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-391]
61. mrps9 ENSDARG00000061505 1636 0.801 - - - - - - 0.801 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
62. znf395a ENSDARG00000060113 3874 0.801 - - - 0.801 - - - - - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
63. lgmn ENSDARG00000039150 2788 0.8 - - - - - - 0.800 - - legumain [Source:ZFIN;Acc:ZDB-GENE-021030-1]
64. tgfb1b ENSDARG00000034895 608 0.8 - - - - - - 0.800 - - transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
65. ddc ENSDARG00000016494 93 0.799 - - - - - - 0.799 - - dopa decarboxylase [Source:ZFIN;Acc:ZDB-GENE-040426-2656]
66. agfg1b ENSDARG00000019526 472 0.798 - - - - - - 0.798 - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
67. cxcl-c5c cxcl-c5c 182 0.798 - - - - - - 0.798 - -
68. fsta ENSDARG00000052846, ENSDARG00000113185 539 0.796 - - - - - - 0.796 - - follistatin a [Source:ZFIN;Acc:ZDB-GENE-990714-11]
69. fntb ENSDARG00000027916 736 0.796 - - - 0.796 - - - - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
70. zgc:73226 ENSDARG00000023759 120 0.796 - - - - - - 0.796 - - zgc:73226 [Source:ZFIN;Acc:ZDB-GENE-050703-8]
71. BX649282.1 ENSDARG00000105704 347 0.796 - - - - - - 0.796 - -
72. tpcn1 ENSDARG00000062362 563 0.794 - - - - - - 0.794 - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
73. CR774186.2 CR774186.2 104 0.794 - - - - - 0.794 - - -
74. snrnp70 ENSDARG00000077126 5921 0.794 - 0.794 - - - - - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
75. abl2 ENSDARG00000013841 145 0.793 - - - - - - 0.793 - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
76. foxc1a ENSDARG00000091481 1059 0.793 - - - - - - 0.793 - - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
77. tmsb ENSDARG00000054911 6411 0.791 - 0.791 - - - - - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
78. nol12 ENSDARG00000038027 2288 0.791 - 0.791 - - - - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
79. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 0.789 - 0.789 - - - - - - - ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
80. cdh15 ENSDARG00000068191, ENSDARG00000112512, ENSDARG00000116974 121 0.789 - 0.789 - - - - - - - cadherin 15, type 1, M-cadherin (myotubule) [Source:ZFIN;Acc:ZDB-GENE-030131-780]
81. aplnra ENSDARG00000002172 955 0.786 - - - - - - 0.786 - - apelin receptor a [Source:ZFIN;Acc:ZDB-GENE-060929-512]
82. egfl7 ENSDARG00000100657 776 0.786 - - - - - - 0.786 - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
83. cox4i1l ENSDARG00000012388 584 0.786 - - - - - - 0.786 - - cytochrome c oxidase subunit 4I1, like [Source:ZFIN;Acc:ZDB-GENE-130814-2]
84. tatdn3 ENSDARG00000054076 130 0.785 - - - - - - 0.785 - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
85. pigo ENSDARG00000011743 928 0.785 - 0.785 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
86. CR974475.2 CR974475.2 38 0.785 - - - - - - 0.785 - -
87. nrip2 ENSDARG00000079985 505 0.785 - - - - - - 0.785 - - nuclear receptor interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9425]
88. cep57l1 ENSDARG00000002826 521 0.785 - 0.785 - - - - - - - centrosomal protein 57, like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-27]
89. mef2bnb mef2bnb 551 0.784 - 0.784 - - - - - - -
90. sh3gl1b ENSDARG00000002642, ENSDARG00000113208 61 0.784 - - - - - - 0.784 - - SH3-domain GRB2-like 1b [Source:ZFIN;Acc:ZDB-GENE-031001-6]
91. ck2a1 ck2a1 3749 0.784 - 0.784 - - - - - - -
92. apc ENSDARG00000058868 2605 0.784 - 0.784 - - - - - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
93. mrpl24 ENSDARG00000019222 798 0.784 - 0.784 - - - - - - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
94. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.784 - 0.784 - - - - - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
95. nr1d4b ENSDARG00000059370 243 0.784 - - - - - - 0.784 - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
96. STYK1_1 STYK1_1 34 0.784 - - - - - - 0.784 - -
97. pcgf6 ENSDARG00000069681 2382 0.783 - - - - - - 0.783 - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
98. mrps27 ENSDARG00000059234 802 0.783 - - - - - - 0.783 - - mitochondrial ribosomal protein S27 [Source:ZFIN;Acc:ZDB-GENE-040808-39]
99. fam73a 336 0.783 - - - - - - 0.783 - - family with sequence similarity 73, member A, transcript variant X1
100. si:dkey-261h17.1 ENSDARG00000095268 11403 0.783 - - - - - - 0.783 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]

There are 501 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA