Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptpn1

Gene Name Gene ID Reads Annotation
ptpn1 ENSDARG00000007923 3647 protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]










Genes with expression patterns similar to ptpn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptpn1 ENSDARG00000007923 3647 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
2. tor1 ENSDARG00000077950 1027 2.425 - 0.703 0.987 - - 0.735 - - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
3. acsbg1 ENSDARG00000062077 2020 2.19 - - - - - 0.748 0.732 - 0.710 acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
4. crkl ENSDARG00000028699 2966 1.805 - - 0.956 - - - 0.849 - - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
5. gigfy2 3194 1.785 - 0.816 0.969 - - - - - - GRB10 interacting GYF protein 2, transcript variant X1
6. arhgap24 ENSDARG00000100973 1105 1.775 - - 0.982 - - - - - 0.793 Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
7. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.764 - - 0.974 - - - - - 0.790 debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
8. nap1l4b ENSDARG00000068868 3285 1.76 - 0.789 0.971 - - - - - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
9. klf5a 1072 1.752 0.770 - 0.982 - - - - - - Kruppel-like factor 5a
10. xpo1b ENSDARG00000063229 2529 1.742 - - 0.967 - - 0.775 - - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
11. eng1b eng1b 2544 1.732 - - 0.940 - - - - - 0.792
12. rbm39b ENSDARG00000041853 1421 1.731 - - 0.983 - - 0.748 - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
13. sort1b ENSDARG00000056252 2652 1.727 - - 0.960 - - - - - 0.767 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
14. zranb2 ENSDARG00000044332 6723 1.726 - 0.744 0.982 - - - - - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
15. tfap4 ENSDARG00000103923 2203 1.725 - - 0.966 - - 0.759 - - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
16. dnajc5ab ENSDARG00000004836 2923 1.717 - 0.743 0.974 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
17. ttc3 ENSDARG00000086075 2157 1.715 0.739 - 0.976 - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
18. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.7 - 0.717 0.983 - - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
19. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.698 - - 0.986 - - 0.712 - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
20. ccdc124 ENSDARG00000043502 2420 1.698 - 0.720 0.978 - - - - - - coiled-coil domain containing 124 [Source:ZFIN;Acc:ZDB-GENE-040426-1483]
21. ENSDARG00000086666 ENSDARG00000086666 2159 1.693 - - 0.845 - - - - - 0.848
22. hnrnpr ENSDARG00000014569 3423 1.692 - - 0.941 - - 0.751 - - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
23. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.69 - 0.714 0.976 - - - - - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
24. setd8a 2549 1.676 - - 0.975 - - - 0.701 - - SET domain containing (lysine methyltransferase) 8a
25. sdc4 ENSDARG00000059906 10105 1.674 - - 0.892 - - - 0.782 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
26. eif3g ENSDARG00000016889 10367 1.646 - - - - - 0.777 - - 0.869 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
27. ctsf ENSDARG00000063095 4564 1.644 - 0.704 0.940 - - - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
28. snrpa1 ENSDARG00000024651 3306 1.629 0.753 - - - - - - - 0.876 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
29. rtf1 ENSDARG00000008947 6596 1.621 - - 0.857 - - 0.764 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
30. psmd13 ENSDARG00000016239 4229 1.613 - - 0.856 - - 0.757 - - - proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
31. lrp1b lrp1b 3216 1.608 - - 0.896 - - 0.712 - - -
32. chtopa ENSDARG00000057234 3287 1.602 - 0.743 - - - - - - 0.859 chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
33. pex13 ENSDARG00000071037 738 1.596 0.767 - - - - - 0.829 - - peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
34. ing2 ENSDARG00000104907 1336 1.596 - - - - - - 0.746 - 0.850 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
35. cops2 ENSDARG00000004785 4911 1.574 - - - 0.763 - - - - 0.811 COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
36. gkap1 ENSDARG00000068123 2645 1.567 - - - - - - 0.715 - 0.852 G kinase anchoring protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2485]
37. ENSDARG00000095341 ENSDARG00000095341 488 1.564 0.758 - - - - - 0.806 - -
38. prc1a ENSDARG00000100918 1746 1.563 - - - - - - 0.720 - 0.843 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
39. eif3m ENSDARG00000013931 8117 1.561 - 0.701 0.860 - - - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
40. CABZ01088509.1 CABZ01088509.1 1213 1.543 - - - - - 0.705 - - 0.838
41. ctnna1 ENSDARG00000102441 7984 1.52 - - 0.815 - - - 0.705 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
42. eif4ebp2 ENSDARG00000031819 13168 1.518 - - - - - 0.767 - - 0.751 eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
43. adcy6b ENSDARG00000027797, ENSDARG00000111136 548 1.514 0.778 - - - - 0.736 - - - adenylate cyclase 6b [Source:ZFIN;Acc:ZDB-GENE-090127-2]
44. tmem181 ENSDARG00000045910 2288 1.511 - - - - - 0.753 - - 0.758 transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
45. zgc:55512 zgc:55512 4436 1.507 - 0.794 - - - - 0.713 - -
46. xpo1a ENSDARG00000078041 3544 1.504 - 0.741 - - - - 0.763 - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
47. sptbn2 ENSDARG00000053956 8452 1.501 - 0.768 - - - 0.733 - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
48. si:dkey-286j15.1 ENSDARG00000040864 1718 1.494 - 0.776 - - - - 0.718 - - si:dkey-286j15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-447]
49. dopey2 1088 1.49 - 0.778 - - - 0.712 - - - dopey family member 2, transcript variant X2
50. rpz5 ENSDARG00000075718 1703 1.487 - - - - - 0.710 - - 0.777 rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
51. u2af1 ENSDARG00000015325 3217 1.485 - - - 0.770 - 0.715 - - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
52. ptbp1a ENSDARG00000019362 6290 1.482 - 0.751 - - - - 0.731 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
53. lsm12b ENSDARG00000109510 14459 1.478 - 0.776 0.702 - - - - - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
54. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.475 - - - - - 0.739 0.736 - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
55. RPRD1A ENSDARG00000104861 2560 1.474 - 0.766 - - - - - - 0.708 regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
56. tnfaip8l2b ENSDARG00000046148 1133 1.473 - - - - - 0.711 - - 0.762 tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
57. CU862021.1 CU862021.1 5925 1.473 - 0.762 - - - - 0.711 - -
58. edf1 ENSDARG00000009950 10518 1.466 - 0.741 - - - - - - 0.725 endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
59. wls ENSDARG00000009534 8719 1.465 - - - - - 0.737 0.728 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
60. tfpia ENSDARG00000034718 1257 1.462 - 0.742 - - - 0.720 - - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
61. suv420h1 1810 1.455 - 0.719 - - - - - 0.736 - suppressor of variegation 4-20 homolog 1 (Drosophila)
62. ugp2b ENSDARG00000008200, ENSDARG00000110864 1516 1.447 - - - - - 0.727 0.720 - - UDP-glucose pyrophosphorylase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6352]
63. ddx39ab ENSDARG00000015111 11619 1.446 - - 0.743 - - 0.703 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
64. RB1CC1 ENSDARG00000076559 2771 1.439 - 0.707 - - - - - - 0.732 RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
65. TMEM131 ENSDARG00000056259, ENSDARG00000114857 1073 1.424 0.719 - - - - 0.705 - - - transmembrane protein 131 [Source:ZFIN;Acc:ZDB-GENE-130530-662]
66. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 1.417 0.712 - - - - - 0.705 - - erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
67. gng5 ENSDARG00000039830 12102 1.416 - - - - - 0.702 0.714 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
68. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.412 - - - - - 0.707 0.705 - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
69. irf2bp1 ENSDARG00000005468 1362 1.409 - 0.707 - - - 0.702 - - - interferon regulatory factor 2 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050420-389]
70. wtip ENSDARG00000103607 797 0.986 - - 0.986 - - - - - - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
71. APBA3 APBA3 852 0.986 - - 0.986 - - - - - -
72. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 0.986 - - 0.986 - - - - - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
73. ddx27 ENSDARG00000091831 1471 0.986 - - 0.986 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
74. BX323045.3 BX323045.3 1044 0.986 - - 0.986 - - - - - -
75. ppie ENSDARG00000103234, ENSDARG00000111596 511 0.985 - - 0.985 - - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
76. yaf2 ENSDARG00000015966 1905 0.985 - - 0.985 - - - - - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
77. TUSC3 ENSDARG00000078854 1021 0.985 - - 0.985 - - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
78. thbs1b ENSDARG00000010785 3095 0.985 - - 0.985 - - - - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
79. nr1h3 ENSDARG00000098439 859 0.985 - - 0.985 - - - - - - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
80. snai1b ENSDARG00000046019 886 0.985 - - 0.985 - - - - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
81. wu:fb52c12 wu:fb52c12 763 0.985 - - 0.985 - - - - - -
82. hsbp1a ENSDARG00000069425 1086 0.985 - - 0.985 - - - - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
83. clk2a ENSDARG00000062954 1890 0.985 - - 0.985 - - - - - - CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
84. lin54 ENSDARG00000063194 2583 0.984 - - 0.984 - - - - - - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
85. smg6 ENSDARG00000100481 493 0.984 - - 0.984 - - - - - - SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
86. hrasb ENSDARG00000005651 662 0.984 - - 0.984 - - - - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
87. brap ENSDARG00000008560 821 0.984 - - 0.984 - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
88. s100a1 ENSDARG00000015543 274 0.984 - - 0.984 - - - - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
89. fdx1l 461 0.984 - - 0.984 - - - - - - ferredoxin 1-like
90. zmat5 ENSDARG00000035434 983 0.984 - - 0.984 - - - - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
91. tmem194b tmem194b 724 0.984 - - 0.984 - - - - - -
92. CREB3L4 1085 0.984 - - 0.984 - - - - - - cAMP responsive element binding protein 3-like 4
93. nlk1 ENSDARG00000006566 1123 0.984 - - 0.984 - - - - - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
94. HDX ENSDARG00000079382 513 0.984 - - 0.984 - - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
95. foxd1 ENSDARG00000029179 726 0.983 - - 0.983 - - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
96. tmem50a ENSDARG00000015757 3244 0.983 - - 0.983 - - - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
97. si:ch211-283l16.1 ENSDARG00000112586 131 0.983 - - 0.983 - - - - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
98. CABZ01087568.1 CABZ01087568.1 1487 0.983 - - 0.983 - - - - - -
99. twf1a ENSDARG00000115712 3465 0.983 - - 0.983 - - - - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
100. atg4a ENSDARG00000014531 481 0.983 - - 0.983 - - - - - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]

There are 1293 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA