Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptp4a3

Gene Name Gene ID Reads Annotation
ptp4a3 ENSDARG00000039997 1964 protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]










Genes with expression patterns similar to ptp4a3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptp4a3 ENSDARG00000039997 1964 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
2. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 2.546 0.719 0.853 - - - - 0.974 - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
3. casc4 ENSDARG00000074490 2019 2.518 - 0.705 - - 0.822 - 0.991 - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
4. hfe2 4113 2.516 0.775 0.746 - - - - 0.995 - - hemochromatosis type 2
5. smyd1b ENSDARG00000091253 4964 2.505 0.781 0.772 - - - - 0.952 - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
6. fitm1 ENSDARG00000056464 1759 2.492 0.893 0.798 - 0.801 - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
7. knop1 ENSDARG00000077721 2198 2.463 - 0.828 - - 0.872 0.763 - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
8. dbnla ENSDARG00000008170 2129 2.403 - - - - 0.854 0.751 0.798 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
9. gstm gstm 4064 2.397 0.791 0.731 - - - 0.875 - - -
10. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 2.392 - 0.716 - - - 0.704 0.972 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
11. srpk3 ENSDARG00000005916 1546 2.35 0.728 0.737 - - - 0.885 - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
12. mybbp1a ENSDARG00000078214 2458 2.339 0.803 0.709 - - 0.827 - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
13. tns1 tns1 5891 2.329 0.709 0.721 - - - 0.899 - - -
14. C2CD2 ENSDARG00000105000 2573 2.327 - - - - 0.816 0.722 0.789 - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
15. sh3bgr ENSDARG00000021633 3498 2.322 0.777 0.790 - - - - - 0.755 - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
16. BX323459.1 ENSDARG00000109508 1476 2.321 - 0.715 - - 0.897 - - 0.709 -
17. mir133b_1 671 2.315 0.730 0.791 - - - - - 0.794 - microRNA 133b
18. zgc:175214 ENSDARG00000022891 1013 2.285 - 0.747 - - - 0.805 - 0.733 - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
19. mrps14 ENSDARG00000068305 1648 2.254 0.709 0.751 - - 0.794 - - - - mitochondrial ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-060825-75]
20. trim55a ENSDARG00000029596 2858 2.195 - 0.737 - - - 0.724 - 0.734 - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
21. mgll ENSDARG00000036820 747 1.868 - - - - 0.908 - 0.960 - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
22. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.866 - - - - - 0.887 0.979 - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
23. lrba ENSDARG00000031108 2136 1.865 - - - - 0.919 - 0.946 - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
24. ino80c ENSDARG00000055719 1512 1.852 - - - - 0.864 - 0.988 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
25. wfdc2 ENSDARG00000089187 653 1.824 - - - - - 0.831 0.993 - - WAP four-disulfide core domain 2 [Source:ZFIN;Acc:ZDB-GENE-090313-47]
26. ankrd6b ENSDARG00000029370 429 1.807 - - - - - 0.820 0.987 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
27. rrp7a ENSDARG00000098934 1123 1.803 - 0.817 - - - - 0.986 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
28. C2H6orf52 C2H6orf52 2847 1.797 - - - - - 0.806 0.991 - -
29. phax ENSDARG00000044298 2302 1.794 - - - - 0.806 - 0.988 - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
30. auh ENSDARG00000042975 1841 1.793 - 0.816 - - - - 0.977 - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
31. csnk1db ENSDARG00000006125 2581 1.789 - - - - 0.833 - 0.956 - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
32. slc24a4a ENSDARG00000015425 1464 1.784 - - - - - - 0.989 0.795 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-050417-291]
33. dpp9 ENSDARG00000052606 2279 1.76 - 0.783 - - - - 0.977 - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
34. si:ch211-198b3.1 si:ch211-198b3.1 765 1.755 - - - - 0.913 0.842 - - -
35. gnl3 ENSDARG00000006219 3854 1.754 - 0.764 - - - - 0.990 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
36. mrpl40 ENSDARG00000043554 2198 1.753 - - - - 0.880 0.873 - - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
37. xpo1b ENSDARG00000063229 2529 1.735 - - - - 0.758 - 0.977 - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
38. myo9b ENSDARG00000077410 1956 1.727 - - - 0.766 - - 0.961 - - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
39. hiat1a ENSDARG00000013117 607 1.724 - - - - - 0.736 0.988 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
40. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.723 - 0.747 - - - - 0.976 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
41. NBR1 NBR1 752 1.722 - - - 0.736 - - 0.986 - -
42. cryba1b ENSDARG00000053875 3256 1.718 - - - - 0.732 - 0.986 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
43. myoz2b ENSDARG00000037266 2139 1.716 - 0.809 - - 0.907 - - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
44. fgf6a ENSDARG00000009351 799 1.715 - - - - - 0.848 - 0.867 - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
45. dchs1b ENSDARG00000079850 831 1.713 - - - - 0.902 0.811 - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
46. hdgfrp2 7462 1.712 - 0.723 - - - - 0.989 - - hepatoma-derived growth factor-related protein 2, transcript variant X1
47. nudt2 ENSDARG00000058728 371 1.711 - - - - 0.918 - - 0.793 - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
48. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.708 - - - - - 0.776 0.932 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
49. CORO1C CORO1C 5554 1.701 - 0.716 - - - - 0.985 - -
50. fam3c ENSDARG00000056152 3833 1.699 - - - - 0.717 - 0.982 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
51. lgi2a ENSDARG00000111069 965 1.696 - - - - 0.906 - - 0.790 - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
52. AIMP1 ENSDARG00000060036 4136 1.696 - 0.761 - - - - 0.935 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
53. gpc4 ENSDARG00000015472 2529 1.695 - - - - - 0.735 0.960 - - glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]
54. cnbpa ENSDARG00000045776 8648 1.687 0.764 - - - - - 0.923 - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
55. ppapdc1b ppapdc1b 2866 1.681 - - - - - 0.714 0.967 - -
56. im:7154842 im:7154842 434 1.67 - - - - 0.910 0.760 - - -
57. gstp1 ENSDARG00000104068 12698 1.665 - - - - 0.866 - 0.799 - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
58. cyb5r3 ENSDARG00000005891 4440 1.662 - - - - 0.791 - 0.871 - - cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
59. tbc1d5 ENSDARG00000036212 2580 1.66 - - - - 0.768 - 0.892 - - TBC1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1197]
60. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 1.657 - 0.768 - - 0.889 - - - - spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
61. dscc1 ENSDARG00000019907 720 1.655 - - - - 0.864 0.791 - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
62. ccdc25 ENSDARG00000021753 3837 1.653 - 0.803 - - - 0.850 - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
63. lect2l ENSDARG00000033227 482 1.647 - - - - - - 0.947 0.700 - leukocyte cell-derived chemotaxin 2 like [Source:ZFIN;Acc:ZDB-GENE-070127-4]
64. mrps30 ENSDARG00000104111 2900 1.645 - - - - 0.791 0.854 - - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
65. trim55b ENSDARG00000058158 586 1.644 - 0.780 - - - 0.864 - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
66. ctdsp1 ENSDARG00000040674 2828 1.644 - - - 0.781 0.863 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
67. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.64 - 0.783 - - - 0.857 - - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
68. cpsf5 cpsf5 1841 1.638 - 0.796 - - 0.842 - - - -
69. CU570681.1 CU570681.1 512 1.636 - - - 0.720 0.916 - - - -
70. ZNF576 ZNF576 1447 1.63 - - - - 0.812 0.818 - - -
71. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.623 - - - - 0.866 0.757 - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
72. chrnd ENSDARG00000019342 2728 1.621 - 0.757 - - 0.864 - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
73. ppp4cb ENSDARG00000076439 1693 1.619 - 0.752 - - 0.867 - - - - protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
74. EEF1E1 ENSDARG00000071774 3806 1.619 - 0.796 - - - 0.823 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
75. SCARF2 1117 1.612 0.736 - - - - 0.876 - - - scavenger receptor class F, member 2
76. lpl ENSDARG00000087697 2578 1.612 - 0.826 - - 0.786 - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
77. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.612 0.806 0.806 - - - - - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
78. megf8_1 ENSDARG00000079751, ENSDARG00000103934 722 1.61 - 0.825 - - - - - 0.785 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
79. mif ENSDARG00000071336 1328 1.598 - 0.771 - - - 0.827 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
80. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.596 - 0.800 - - - 0.796 - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
81. dnajc8 ENSDARG00000059373 1858 1.596 - 0.721 - - - - - 0.875 - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
82. ect2 ENSDARG00000007278 1193 1.594 - 0.731 - - 0.863 - - - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
83. prrx1a ENSDARG00000033971 1786 1.593 - - - - 0.788 0.805 - - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
84. ddx27 ENSDARG00000091831 1471 1.593 0.709 - - - 0.884 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
85. ablim2 ENSDARG00000055223 1934 1.593 - - - - 0.870 - - 0.723 - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
86. myod1 ENSDARG00000030110 6019 1.591 0.809 0.782 - - - - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
87. mn1b ENSDARG00000079248 882 1.586 - 0.720 - - 0.866 - - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
88. gdap1l1 ENSDARG00000028628 233 1.583 - - - - - 0.803 - 0.780 - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
89. mrpl54 ENSDARG00000071468 2715 1.581 0.825 - - - 0.756 - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
90. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.578 - - - - 0.780 0.798 - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
91. DUSP27 ENSDARG00000099889 1197 1.578 0.813 0.765 - - - - - - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
92. ppil1 ENSDARG00000015422 1353 1.577 - - - - - 0.801 - 0.776 - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:ZFIN;Acc:ZDB-GENE-051009-1]
93. sra1 ENSDARG00000053619 2799 1.576 - - - - 0.769 0.807 - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
94. txlnbb ENSDARG00000076241 6396 1.576 0.776 0.800 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
95. gpx7 ENSDARG00000091511 3045 1.575 - 0.774 - - - 0.801 - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
96. parvaa ENSDARG00000043710 3495 1.569 - - - - 0.769 - 0.800 - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
97. tmem203 ENSDARG00000104996 1182 1.568 - - - - 0.854 0.714 - - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
98. cacna2d1a ENSDARG00000014804 1924 1.568 0.783 0.785 - - - - - - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
99. DHRS7C DHRS7C 363 1.567 - 0.773 - - - - - 0.794 -
100. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.565 - - - - - 0.795 - 0.770 - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]

There are 2112 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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