Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptmab

Gene Name Gene ID Reads Annotation
ptmab ENSDARG00000101766 182812 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]










Genes with expression patterns similar to ptmab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptmab ENSDARG00000101766 182812 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
2. h3f3a 66671 3.415 0.839 - 0.829 - - - - 0.915 0.832 H3 histone, family 3A, transcript variant X1
3. hsp90ab1 ENSDARG00000029150 102372 2.39 - - - - 0.751 - - 0.842 0.797 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
4. tmem35 ENSDARG00000052567 5685 2.354 0.754 - 0.791 - - - - 0.809 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
5. h2afvb ENSDARG00000116491 35692 2.302 0.702 - 0.719 - - - - 0.881 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
6. hmga1a ENSDARG00000028335 254077 2.295 0.718 - - 0.781 - - - 0.796 - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
7. hmgn2 ENSDARG00000099572 110168 2.232 0.702 - - - - - - 0.817 0.713 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
8. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.135 0.714 - - - - 0.709 - 0.712 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
9. zgc:112425 zgc:112425 293873 1.755 - - - - 0.826 - - 0.929 -
10. hnrnpab hnrnpab 72354 1.717 0.849 - - - - - - 0.868 -
11. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 1.675 0.849 - - - - - - 0.826 - prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
12. hnrnpa0a ENSDARG00000089302 45675 1.656 0.828 - - - - - - 0.828 - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
13. AL954137.2 ENSDARG00000114408 104506 1.639 - - - 0.751 - - - 0.888 -
14. stmn1b ENSDARG00000033655 9491 1.638 0.789 - - - - - - 0.849 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
15. zgc:123194 zgc:123194 69174 1.638 0.880 - - - - - - 0.758 -
16. hdac1 ENSDARG00000015427 19804 1.631 0.854 - - - - - - 0.777 - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
17. tuba1c ENSDARG00000055216 8384 1.618 0.828 - - - - - - 0.790 - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
18. khdrbs1a ENSDARG00000052856 53666 1.61 0.761 - - - - - - 0.849 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
19. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.606 0.791 - - - - - - 0.815 - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
20. hmgb2b ENSDARG00000053990 11519 1.601 0.778 - - - - - - 0.823 - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
21. mllt11 ENSDARG00000071026 2518 1.588 0.764 - - - - - - 0.824 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
22. clvs2 ENSDARG00000053122 1390 1.588 0.813 - - - - - - 0.775 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
23. HNRNPA2B1 HNRNPA2B1 14997 1.588 - - 0.839 - - - - 0.749 -
24. sox3 ENSDARG00000053569 12016 1.578 0.829 - - - - - - 0.749 - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
25. si:ch73-21g5.7 ENSDARG00000093156 9412 1.571 0.805 - - - - - - 0.766 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
26. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.569 0.785 - - - - - - 0.784 -
27. pcna ENSDARG00000054155 89521 1.565 - - 0.750 - - - - 0.815 - proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
28. rbm4.3 ENSDARG00000022129 28571 1.565 0.738 - - - - - - 0.827 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
29. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.558 0.743 - - - - - - 0.815 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
30. hnrnpub ENSDARG00000004735 16496 1.558 0.740 - - - - - - 0.818 - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
31. scrt2 ENSDARG00000056175 4331 1.557 0.784 - 0.773 - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
32. cnrip1a ENSDARG00000091683 1491 1.556 0.745 - - - - - - 0.811 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
33. hmgb1b ENSDARG00000030479 10398 1.552 0.759 - - - - - - 0.793 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
34. fez1 ENSDARG00000023174 701 1.551 0.723 - - - - - - 0.828 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
35. CABZ01111990.1 CABZ01111990.1 4374 1.542 0.774 - - - - - - 0.768 -
36. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.54 - - 0.755 - - - - 0.785 - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
37. notch3 ENSDARG00000052139 15033 1.537 0.757 - - - - - - 0.780 - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
38. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.534 0.817 - - - - - - 0.717 - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
39. ppiaa ENSDARG00000009212 290634 1.529 - - - - 0.704 - - 0.825 - peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
40. sncb ENSDARG00000104945 8197 1.526 0.807 - - - - - - 0.719 - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
41. mapre1b ENSDARG00000002659 9119 1.519 - - 0.792 - - - - 0.727 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
42. dla ENSDARG00000010791 9281 1.517 0.806 - - - - 0.711 - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
43. anp32a ENSDARG00000006487 28249 1.517 0.758 - - - - - - 0.759 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
44. tubb4b ENSDARG00000002344 30333 1.507 0.741 - - - - - - 0.766 - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
45. hspa8 ENSDARG00000068992, ENSDARG00000114726 183870 1.505 - - - - - - - 0.785 0.720 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
46. neurog1 ENSDARG00000056130 3924 1.504 0.797 - - - - 0.707 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
47. tox ENSDARG00000032317 9126 1.492 0.788 - - - 0.704 - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
48. pbx4 ENSDARG00000052150 35676 1.487 0.750 - - - - - - 0.737 - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
49. sox2 ENSDARG00000070913 2763 1.486 0.783 - - 0.703 - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
50. sox21b ENSDARG00000008540 1460 1.477 0.754 - - - - - - 0.723 - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
51. C7H4orf48 C7H4orf48 1455 1.47 0.701 - - - - - - 0.769 -
52. gap43 ENSDARG00000099744 4114 1.462 0.758 - - - - - - 0.704 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
53. fsd1 ENSDARG00000062017 207 1.46 0.757 - - - - - - 0.703 - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
54. CLIP3 ENSDARG00000054456 734 1.453 0.744 - - - - - - 0.709 - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
55. her13 ENSDARG00000007097 2000 1.423 0.704 - - - - - - 0.719 - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
56. uhrf1 ENSDARG00000103409 3282 1.418 0.703 - - - - - - 0.715 - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
57. cfl1 ENSDARG00000021124 78399 0.902 - - - - - - - 0.902 - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
58. nucks1a ENSDARG00000078473 28285 0.896 - - - - - - - 0.896 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
59. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 0.895 - - - - - - - 0.895 - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
60. si:dkey-235h8.1 si:dkey-235h8.1 2457 0.881 - - - - - - - 0.881 -
61. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 0.873 - - - - - - - 0.873 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
62. ssbp4 ENSDARG00000056483 10196 0.87 - - - - - - - 0.870 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
63. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 0.847 - - - - - - - 0.847 - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
64. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 0.846 - - - - - - - 0.846 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
65. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 0.845 - - - - - - - 0.845 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
66. marcksa ENSDARG00000004049 2518 0.84 - - - - - - - 0.840 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
67. mab21l1 ENSDARG00000102047 4665 0.839 - - - - - - - 0.839 - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
68. h2afva ENSDARG00000068820 16427 0.839 - - - - - - - 0.839 - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
69. slbp ENSDARG00000100558 3405 0.836 - - - - - - - 0.836 - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
70. rcor2 ENSDARG00000008278 1678 0.836 - - - - - - - 0.836 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
71. top1l ENSDARG00000070545 40529 0.833 - - - - - - - 0.833 - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
72. her2 ENSDARG00000038205 3219 0.831 0.831 - - - - - - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
73. id1 ENSDARG00000040764 112601 0.83 0.830 - - - - - - - - inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
74. plp1a ENSDARG00000103732 3544 0.828 0.828 - - - - - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
75. mta2 ENSDARG00000013031 2932 0.827 - - - - - - - 0.827 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
76. nova2 ENSDARG00000017673 7685 0.826 0.826 - - - - - - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
77. gfap ENSDARG00000025301 5584 0.822 0.822 - - - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
78. ilf3b ENSDARG00000105177 9473 0.821 - - - - - - - 0.821 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
79. ilf2 ENSDARG00000014591 14543 0.821 - - - - - - - 0.821 - interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
80. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 0.82 - - 0.820 - - - - - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
81. sprn ENSDARG00000056004 128 0.82 - - - - - - - 0.820 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
82. PRTG PRTG 4714 0.818 0.818 - - - - - - - -
83. celf4 ENSDARG00000070045 1537 0.817 0.817 - - - - - - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
84. st18 663 0.816 - - - - - - - 0.816 - suppression of tumorigenicity 18, zinc finger
85. calb2b ENSDARG00000036344 2417 0.816 0.816 - - - - - - - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
86. GLRA3 ENSDARG00000011066 242 0.814 0.814 - - - - - - - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
87. khsrp ENSDARG00000026489 15738 0.814 0.814 - - - - - - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
88. cux2a 493 0.813 0.813 - - - - - - - - cut-like homeobox 2a
89. reep2 ENSDARG00000031382, ENSDARG00000112622 563 0.811 0.811 - - - - - - - - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
90. EFCC1 ENSDARG00000077826 1359 0.811 0.811 - - - - - - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
91. fubp1 ENSDARG00000029248 15259 0.81 - - - - - - - 0.810 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
92. supt16h ENSDARG00000079949 4755 0.81 - - 0.810 - - - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
93. LMTK3 LMTK3 222 0.809 - - - - - - - 0.809 -
94. celf3a ENSDARG00000034668 2432 0.809 - - - - - - - 0.809 - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
95. dmbx1a ENSDARG00000009922 284 0.808 - - - - - - - 0.808 - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
96. C8H1orf106 C8H1orf106 2690 0.808 0.808 - - - - - - - -
97. lhx5 ENSDARG00000057936 785 0.807 - - - - - - - 0.807 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
98. irx1a ENSDARG00000101831 644 0.806 - - - - - - - 0.806 - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
99. ELOVL4 ELOVL4 3026 0.806 0.806 - - - - - - - -
100. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 0.805 - - - - - - - 0.805 - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]

There are 412 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA