Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptf1a

Gene Name Gene ID Reads Annotation
ptf1a ENSDARG00000014479 349 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]










Genes with expression patterns similar to ptf1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptf1a ENSDARG00000014479 349 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
2. sez6l ENSDARG00000100594 35 2.833 1.000 - - - - 0.833 1.000 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
3. si:dkey-122c11.4 si:dkey-122c11.4 13 2.792 1.000 1.000 - - - 0.792 - - -
4. sult4a1 ENSDARG00000101967 205 2.775 1.000 - - - - 0.831 0.944 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
5. syt9b ENSDARG00000029239 31 2.697 0.905 1.000 - - - 0.792 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
6. CU179656.1 ENSDARG00000107086 270 2.619 0.702 0.969 - - - 0.948 - - -
7. syt11b ENSDARG00000056105 578 2.587 - 0.974 - - - 0.836 - - 0.777 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
8. prdm13 ENSDARG00000078701 205 2.585 - - - - - 0.982 0.836 0.767 - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
9. tagln3a ENSDARG00000079805 123 2.582 0.772 1.000 - - - 0.810 - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
10. CNTNAP3 ENSDARG00000067824 25 2.582 0.713 - - - - 0.869 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
11. MCTP1 MCTP1 219 2.578 - 0.881 - - - 0.792 0.905 - -
12. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 2.572 1.000 - - - - 0.793 0.779 - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
13. atoh7 ENSDARG00000069552 254 2.552 - - - - - - 1.000 0.806 0.746 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
14. capn1b ENSDARG00000052748, ENSDARG00000117045 320 2.494 0.738 0.837 - - - 0.919 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
15. MLLT4 MLLT4 67 2.475 1.000 - - - - - - 0.767 0.708
16. fam219ab ENSDARG00000013813 591 2.449 - 1.000 - - - 0.729 - 0.720 - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
17. cspg5b ENSDARG00000099793 67 2.381 - - - - - 0.876 - 0.741 0.764 chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
18. Sep-03 Sep-03 1124 2.37 - - - - - 0.837 0.733 - 0.800
19. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.36 0.735 - - - - 0.849 0.776 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
20. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.351 - 0.713 0.890 - - 0.748 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
21. isl1 ENSDARG00000004023 981 2.322 - - - - - - 0.794 0.737 0.791 ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
22. nbeaa ENSDARG00000070080 862 2.306 - - - - - 0.809 - 0.720 0.777 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
23. mapk11 ENSDARG00000045836 846 2.297 0.767 - - - 0.732 0.798 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
24. st8sia2 ENSDARG00000018788 2183 2.282 - - 0.762 0.801 - - 0.719 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
25. CT990561.1 ENSDARG00000058284 566 2.276 - - - 0.770 0.757 - - - 0.749 EPH receptor A5 [Source:NCBI gene;Acc:797595]
26. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.272 - - 0.800 - - - 0.762 - 0.710 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
27. wfikkn2a ENSDARG00000013460 859 2.237 - - - 0.702 - 0.779 - - 0.756 info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
28. nova2 ENSDARG00000017673 7685 2.192 - 0.708 - 0.712 - 0.772 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
29. st18 663 2.163 - - - - - - 0.707 0.730 0.726 suppression of tumorigenicity 18, zinc finger
30. TRPC4_1 TRPC4_1 212 2 - 1.000 - - - - 1.000 - -
31. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 2 - 1.000 - - - - 1.000 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
32. pcdh2ab7 7 2 1.000 1.000 - - - - - - - protocadherin 2 alpha b 7
33. CR391967.1 CR391967.1 135 2 - 1.000 - - - - 1.000 - -
34. ciz1a ENSDARG00000089781 20 2 1.000 - - - - - 1.000 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
35. atxn1b ENSDARG00000060862 345 2 1.000 1.000 - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
36. ABCA7 ABCA7 12 2 1.000 1.000 - - - - - - -
37. HIST1H2BA ENSDARG00000116654 10 2 1.000 1.000 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
38. tecrl2 tecrl2 11 2 1.000 1.000 - - - - - - -
39. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 2 1.000 1.000 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
40. rgs11 ENSDARG00000037646 24 1.972 1.000 - - - - 0.972 - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
41. PRR12 PRR12 38 1.972 - - - - - 0.972 1.000 - -
42. prdm14 ENSDARG00000045371 106 1.955 - 1.000 - - - 0.955 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
43. GADD45G_1 GADD45G_1 236 1.919 - - - - - 0.950 0.969 - -
44. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.918 - 1.000 - - - 0.918 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
45. khdrbs2 ENSDARG00000069469 160 1.894 - 1.000 - - - 0.894 - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
46. MCF2L2 ENSDARG00000079742 52 1.892 - 1.000 - - - - 0.892 - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
47. lrrc4bb ENSDARG00000014792 47 1.889 1.000 0.889 - - - - - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
48. FGFBP3 FGFBP3 993 1.879 1.000 - - - - 0.879 - - -
49. scn2b ENSDARG00000101713 796 1.871 - 0.909 - - - 0.962 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
50. uckl1a ENSDARG00000001686 21 1.869 - 1.000 - - - 0.869 - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
51. gabrb2 ENSDARG00000079586 33 1.869 1.000 - - - - 0.869 - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
52. GRM8_1 GRM8_1 85 1.866 1.000 - - - - 0.866 - - -
53. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.862 - 1.000 - - - 0.862 - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
54. SNORA38 SNORA38 574 1.861 1.000 0.861 - - - - - - -
55. zic6 ENSDARG00000071496 402 1.855 - 0.907 - - - 0.948 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
56. gng3 ENSDARG00000009553 2530 1.85 - 0.929 - - - 0.921 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
57. FUT9 FUT9 91 1.841 - 1.000 - - - - 0.841 - -
58. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.839 - - - - - 0.839 1.000 - -
59. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.836 - 1.000 - - - - 0.836 - -
60. CT573433.2 CT573433.2 115 1.825 - 1.000 - - - 0.825 - - -
61. KCNG2 ENSDARG00000035961 58 1.821 0.821 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
62. hspb15 ENSDARG00000078411 6 1.817 - 1.000 - - - - 0.817 - - heat shock protein, alpha-crystallin-related, b15 [Source:ZFIN;Acc:ZDB-GENE-080214-5]
63. lhx1a ENSDARG00000014018 958 1.809 - 0.903 - - - 0.906 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
64. calb1 ENSDARG00000031598 252 1.798 - 1.000 - - - 0.798 - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
65. CLSTN2 ENSDARG00000060637 41 1.793 0.793 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
66. chrna6 ENSDARG00000055559 60 1.793 - - - - - 0.855 0.938 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
67. si:dkey-272j9.2 si:dkey-272j9.2 91 1.792 - 1.000 - - - 0.792 - - -
68. bdnf ENSDARG00000018817 193 1.792 - 1.000 - - - 0.792 - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
69. BX005294.2 ENSDARG00000109361 3 1.792 - - - - - 0.792 1.000 - -
70. tmem179 ENSDARG00000013292 343 1.791 - 0.946 - - - 0.845 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
71. diras1a ENSDARG00000028066 126 1.789 - - - - - 0.913 0.876 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
72. cacng3b ENSDARG00000076401 91 1.789 - 1.000 - - - 0.789 - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
73. RNF208 ENSDARG00000078056 60 1.787 - - - - - 0.993 0.794 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
74. nlgn3a ENSDARG00000104786 91 1.786 - - - - - 0.845 0.941 - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
75. neflb ENSDARG00000012426 298 1.784 - 1.000 - - - 0.784 - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
76. zgc:113210 ENSDARG00000002872 99 1.783 - 1.000 - - - 0.783 - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
77. BX469915.2 BX469915.2 48 1.779 - 1.000 - - - - 0.779 - -
78. gfra3 ENSDARG00000087704 122 1.779 - 1.000 - - - - 0.779 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
79. KCNB2 ENSDARG00000088842 35 1.778 - 0.806 - - - 0.972 - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
80. tbkbp1 ENSDARG00000061473 24 1.776 - - - - - 0.776 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
81. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.775 1.000 - 0.775 - - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
82. gnb5b ENSDARG00000055377 98 1.771 - 0.898 - - - - 0.873 - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
83. zgc:194665 ENSDARG00000004577 136 1.771 - - - - - 0.961 0.810 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
84. entpd3 ENSDARG00000035309 263 1.77 0.875 0.895 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
85. penka ENSDARG00000004869 161 1.767 - 0.991 - - - 0.776 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
86. C18H15orf59 C18H15orf59 80 1.766 - 1.000 - - - 0.766 - - -
87. gria4a ENSDARG00000037496 88 1.76 0.914 - - - - 0.846 - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
88. gsx1 ENSDARG00000035735 1243 1.75 - - 0.829 - - 0.921 - - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
89. rbfox3 rbfox3 1443 1.75 - 0.833 - - - 0.917 - - -
90. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1.746 - 1.000 - - - 0.746 - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
91. otpb ENSDARG00000058379 1143 1.745 - 1.000 - - - - - - 0.745 orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
92. NPAS3 ENSDARG00000109820 362 1.742 - 1.000 - - - 0.742 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
93. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1.735 - 1.000 - - - 0.735 - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
94. espn ENSDARG00000076414 343 1.732 - 0.920 - - - - 0.812 - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
95. SLITRK4 ENSDARG00000079781 54 1.731 - - - - - 0.890 0.841 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
96. SLC36A4 ENSDARG00000039661 175 1.73 0.853 0.877 - - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
97. syt4 ENSDARG00000036505 421 1.727 - 0.815 - - - 0.912 - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
98. vamp2 ENSDARG00000056877 2158 1.727 - - - - - 0.965 - - 0.762 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
99. jph3 ENSDARG00000102204 175 1.725 - 1.000 - - - - 0.725 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
100. SERINC4 ENSDARG00000044815 45 1.723 1.000 - - - - - - 0.723 - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]

There are 1913 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA