Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptena

Gene Name Gene ID Reads Annotation
ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]










Genes with expression patterns similar to ptena

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
2. TNRC6A ENSDARG00000079688 14433 2.608 - 0.863 - - - 0.831 0.914 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
3. zfand3 ENSDARG00000052833 2682 2.533 - 0.887 - - - - 0.779 - 0.867 zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
4. CABZ01092303.1 CABZ01092303.1 8825 2.506 - 0.867 0.904 - - - 0.735 - -
5. midn ENSDARG00000018524 7559 2.394 - - 0.904 - - 0.762 0.728 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
6. btbd10b ENSDARG00000020252 7251 2.38 - 0.882 - - - 0.791 0.707 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
7. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.355 - 0.901 - 0.739 - - 0.715 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
8. arpp19b ENSDARG00000039880 4823 2.31 - 0.761 - - - 0.720 0.829 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
9. tpx2 ENSDARG00000078654 8120 2.267 - - 0.788 - 0.778 - 0.701 - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
10. smarcd1 ENSDARG00000019004 6028 2.245 - - - - 0.704 0.715 0.826 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
11. hnrnpr ENSDARG00000014569 3423 2.243 0.752 - - - - - - 0.721 0.770 heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
12. sltm ENSDARG00000052728 6234 2.212 - - - - 0.740 0.745 0.727 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
13. dpp3 ENSDARG00000020676 2393 2.153 0.708 - - 0.737 - - 0.708 - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
14. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.149 - - - 0.735 - 0.714 0.700 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
15. bsg ENSDARG00000019881 11894 2.14 - 0.706 - - - 0.732 0.702 - - basigin [Source:ZFIN;Acc:ZDB-GENE-030131-9638]
16. rnf10 ENSDARG00000079687 6768 1.701 - - - - - 0.918 0.783 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
17. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.7 - 0.834 - - - - 0.866 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
18. ktn1 ENSDARG00000032802 6251 1.694 - 0.918 - - - - 0.776 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
19. arid4a ENSDARG00000043873 4176 1.682 - 0.869 - - - - 0.813 - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
20. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.674 - - 0.860 - - - 0.814 - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
21. DALRD3 ENSDARG00000068602 3062 1.673 - 0.870 0.803 - - - - - - DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
22. hnrnpk ENSDARG00000018914 8841 1.669 - - - 0.785 - - 0.884 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
23. usp1 ENSDARG00000056414 1816 1.663 - - 0.916 0.747 - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
24. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.659 - - - - - - 0.804 - 0.855 syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
25. axin1 ENSDARG00000102964 1710 1.658 - - - 0.800 - - - - 0.858 axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
26. txnrd1 11401 1.653 - - 0.807 - - - 0.846 - - thioredoxin reductase 1
27. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.649 - 0.830 - - - - 0.819 - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
28. psma4 ENSDARG00000045928 5112 1.647 - 0.834 - - - - 0.813 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
29. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.647 - 0.831 - - - - 0.816 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
30. tcf7l1a ENSDARG00000038159 2288 1.643 - 0.851 - - - - 0.792 - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
31. anp32a ENSDARG00000006487 28249 1.632 - - - - - 0.812 0.820 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
32. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.629 - 0.853 - - - - 0.776 - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
33. lrp5 ENSDARG00000006921 3522 1.623 - 0.894 - - - - 0.729 - - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
34. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.619 - 0.859 - 0.760 - - - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
35. srsf11 ENSDARG00000098574 12801 1.619 - 0.877 - - - - 0.742 - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
36. zfhx4 ENSDARG00000075542 6927 1.615 - 0.868 - - - - 0.747 - - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
37. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 1.614 0.724 - - - - - 0.890 - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
38. gpx4b ENSDARG00000076836 8085 1.614 - 0.880 - - - - 0.734 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
39. arcn1a ENSDARG00000002792 2847 1.604 - - 0.888 - - 0.716 - - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
40. bcl2l1 ENSDARG00000008434 1956 1.603 - 0.887 - - - - 0.716 - - bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
41. kif22 ENSDARG00000102624 3694 1.602 0.815 - - - - - 0.787 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
42. usp9 ENSDARG00000013708 9057 1.6 - - - 0.713 - - 0.887 - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
43. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.599 0.818 - - - - - 0.781 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
44. znf503 ENSDARG00000018492 5974 1.595 - 0.830 - - - - 0.765 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
45. csnk1db ENSDARG00000006125 2581 1.588 - 0.878 - - - 0.710 - - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
46. tmem30aa ENSDARG00000030236 2842 1.587 - 0.869 - - - - 0.718 - - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
47. seh1l ENSDARG00000004280 2915 1.587 0.729 0.858 - - - - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
48. dlg5a ENSDARG00000074059 1834 1.587 - 0.853 - - - - - - 0.734 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
49. lbr ENSDARG00000014013 4835 1.584 - - - - 0.754 - 0.830 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
50. cbx5 ENSDARG00000061187 24026 1.583 - - - - - 0.714 0.869 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
51. ppp2r1a ppp2r1a 11291 1.579 - - 0.785 - - - 0.794 - -
52. lypla2 ENSDARG00000053656 8971 1.577 - - - - - 0.738 0.839 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
53. hn1l hn1l 8861 1.574 - 0.865 - - - 0.709 - - -
54. nusap1 ENSDARG00000002403 6953 1.574 - 0.855 - - 0.719 - - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
55. anp32e ENSDARG00000054804 11017 1.572 0.719 - - - - - 0.853 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
56. her2 ENSDARG00000038205 3219 1.57 - 0.869 0.701 - - - - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
57. BAZ2B BAZ2B 3285 1.565 - 0.830 - - - - 0.735 - -
58. max ENSDARG00000024844 6035 1.562 - - - 0.792 - - 0.770 - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
59. xylt1 ENSDARG00000061248 2357 1.561 - - - - - - 0.707 - 0.854 xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
60. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.556 - 0.813 - - - - 0.743 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
61. snrpb ENSDARG00000011125 11729 1.555 - - - - - 0.775 0.780 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
62. rhoac ENSDARG00000116058 9256 1.555 - 0.764 - - - - 0.791 - - ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
63. Sep-02 Sep-02 10074 1.552 - 0.817 - - - - 0.735 - -
64. ube2na ENSDARG00000008748 4273 1.546 - 0.798 - - - - 0.748 - - ubiquitin-conjugating enzyme E2Na [Source:ZFIN;Acc:ZDB-GENE-040426-2873]
65. atf7ip ENSDARG00000069619 5495 1.544 - - - - - - 0.728 - 0.816 activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
66. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.54 - - - 0.742 - - 0.798 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
67. CPEB2 ENSDARG00000052604 2646 1.539 - - - - - - 0.721 - 0.818 cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
68. pbx2 ENSDARG00000019717 6892 1.539 0.835 - - - - - 0.704 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
69. sel1l ENSDARG00000004581 2246 1.538 - 0.826 - - - - 0.712 - - SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
70. golga7 ENSDARG00000057676 4691 1.536 - - - 0.712 - - 0.824 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
71. cops2 ENSDARG00000004785 4911 1.532 - - - - - - 0.825 - 0.707 COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
72. anp32b ENSDARG00000023330 25013 1.532 - - - - - 0.701 0.831 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
73. JMJD1C_1 JMJD1C_1 3094 1.529 - - - - - 0.803 0.726 - -
74. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 1.524 - 0.816 - - - 0.708 - - - peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
75. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.52 - - - - - - 0.787 - 0.733 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
76. smo ENSDARG00000002952 6411 1.514 - - - 0.730 - - 0.784 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
77. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.512 - 0.805 - - - - 0.707 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
78. acin1a ENSDARG00000054290 14023 1.509 - - - 0.719 - - 0.790 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
79. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.508 - - 0.790 - - - 0.718 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
80. ncoa5 ENSDARG00000016345 5765 1.506 - 0.780 - - - - 0.726 - - nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
81. sdc3 3788 1.504 - - - 0.747 - - 0.757 - - syndecan 3
82. smarca4 smarca4 9726 1.502 - - - - 0.741 - 0.761 - -
83. top1l ENSDARG00000070545 40529 1.501 - - - 0.716 - - 0.785 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
84. tbca ENSDARG00000016754 6427 1.498 - - - - - - 0.760 - 0.738 tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
85. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.496 0.781 - - - - 0.715 - - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
86. ube2v2 ENSDARG00000028198 23341 1.49 - 0.763 - - - - 0.727 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
87. ube2e2 ENSDARG00000034670 5918 1.489 - - - - - - 0.738 - 0.751 ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
88. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.487 0.763 - - - - - 0.724 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
89. myef2 ENSDARG00000059398 6050 1.486 - - - - 0.714 - 0.772 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
90. gkap1 ENSDARG00000068123 2645 1.485 - - - - - - 0.762 - 0.723 G kinase anchoring protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2485]
91. snrpf ENSDARG00000105037 10241 1.484 0.727 - - - - - 0.757 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
92. sf3b4 ENSDARG00000018574 7470 1.478 - - - 0.709 0.769 - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
93. gipc1 ENSDARG00000104483 2913 1.47 - - - 0.742 - - 0.728 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
94. med10 ENSDARG00000070623 5134 1.47 - - - - - 0.720 0.750 - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
95. srsf5a ENSDARG00000029818 15600 1.467 0.739 - - - - 0.728 - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
96. nxf1 ENSDARG00000055076 3251 1.463 - - - 0.750 - - 0.713 - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
97. nsd1a ENSDARG00000060016 2974 1.463 - - - 0.753 - - - - 0.710 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
98. sf3b1 ENSDARG00000056138 5785 1.462 - - - - 0.737 - 0.725 - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
99. u2surp ENSDARG00000061490 2814 1.459 - - - - - - 0.728 - 0.731 U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
100. MKI67 ENSDARG00000091150 11038 1.456 0.727 - - - - - 0.729 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]

There are 1080 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA