Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptchd1

Gene Name Gene ID Reads Annotation
ptchd1 ENSDARG00000018066 3 patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]










Genes with expression patterns similar to ptchd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptchd1 ENSDARG00000018066 3 5 - - 1.000 1.000 1.000 - - 1.000 1.000 patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
2. BX510935.2 BX510935.2 1 2 - - 1.000 - - - - - 1.000
3. si:ch211-191n13.1 si:ch211-191n13.1 1 2 - - 1.000 - 1.000 - - - -
4. SH2D2A SH2D2A 31 1.915 - - 1.000 0.915 - - - - -
5. FRMPD1_2 FRMPD1_2 2 1.856 - - 1.000 - - - - - 0.856
6. ELFN2 ELFN2 7 1.803 - - - 1.000 0.803 - - - -
7. si:dkeyp-80d11.12 ENSDARG00000101728 4 1.803 - - - 1.000 0.803 - - - - si:dkeyp-80d11.12 [Source:ZFIN;Acc:ZDB-GENE-070424-273]
8. erlec1 ENSDARG00000086309 1 1.803 - - 1.000 - 0.803 - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
9. pcdh2ab6 ENSDARG00000091043 1 1.803 - - 1.000 - 0.803 - - - - protocadherin 2 alpha b 6 [Source:ZFIN;Acc:ZDB-GENE-041118-5]
10. PSTPIP2 ENSDARG00000089569 1 1.803 - - - 1.000 0.803 - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
11. si:ch211-12e1.5 si:ch211-12e1.5 14 1.803 - - - 1.000 0.803 - - - -
12. CR854855.2 CR854855.2 1 1.803 - - - - 0.803 - - - 1.000
13. WASF3 WASF3 1 1.803 - - 1.000 - 0.803 - - - -
14. ccnd3 ENSDARG00000027391 1 1.803 - - 1.000 - 0.803 - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
15. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1.771 - - 1.000 - - - - - 0.771 cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
16. kcnk15 ENSDARG00000077371 1 1.756 - - 1.000 - - - - 0.756 - potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
17. prkar2ab ENSDARG00000009477 2 1.756 - - - - - - - 0.756 1.000 protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
18. ttll2 ENSDARG00000077853 9 1.729 - - 0.729 - - - - - 1.000 tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
19. CR318593.1_1 CR318593.1_1 8 1.704 - - 0.704 - - - - - 1.000
20. RP1L1_1 RP1L1_1 11 1.643 - - - - 0.887 - - 0.756 -
21. samsn1b ENSDARG00000078647 8 1.633 - - 0.830 - 0.803 - - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
22. lrmp ENSDARG00000045574 26 1.499 - - 0.761 - 0.738 - - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
23. zgc:152891 ENSDARG00000016789 11 1.458 - - 0.702 - - - - 0.756 - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
24. crygm5 ENSDARG00000041179, ENSDARG00000112467 1 1 - - - - - - - - 1.000 crystallin, gamma M5 [Source:ZFIN;Acc:ZDB-GENE-041024-6]
25. C20H2orf71 C20H2orf71 2 1 - - 1.000 - - - - - -
26. CR848664.1 CR848664.1 12 1 - - - 1.000 - - - - -
27. rasgrf2b ENSDARG00000002816, ENSDARG00000115886 0 1 - - 1.000 - - - - - - Ras protein-specific guanine nucleotide-releasing factor 2b [Source:ZFIN;Acc:ZDB-GENE-060504-1]
28. fam113 ENSDARG00000002685 0 1 - - - - - - - - 1.000 family with sequence similarity 113 [Source:ZFIN;Acc:ZDB-GENE-041212-23]
29. or115-1 ENSDARG00000018521 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
30. mxa ENSDARG00000021688 14 1 - - - 1.000 - - - - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
31. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - 1.000 - - - - - -
32. hbaa1 ENSDARG00000097011 58 1 - - - - - - - - 1.000 hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
33. adam10b ENSDARG00000015502 26 1 - - 1.000 - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
34. si:dkey-190j3.4 ENSDARG00000100743 1 1 - - - 1.000 - - - - - si:dkey-190j3.4 [Source:ZFIN;Acc:ZDB-GENE-070424-218]
35. lyve1b ENSDARG00000062483 14 1 - - - 1.000 - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
36. themis ENSDARG00000010619 5 1 - - 1.000 - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
37. CR450780.4 CR450780.4 0 1 - - 1.000 - - - - - -
38. gdf9 ENSDARG00000003229 4 1 - - - 1.000 - - - - - growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
39. CR388413.1 ENSDARG00000100537 1 1 - - - - - - - - 1.000
40. foxb2 ENSDARG00000037475 1 1 - - - - - - - - 1.000 forkhead box B2 [Source:ZFIN;Acc:ZDB-GENE-081104-320]
41. AL954698.2 ENSDARG00000102132 28 1 - - 1.000 - - - - - -
42. cacna1i ENSDARG00000070522 1 1 - - - - - - - - 1.000 calcium channel, voltage-dependent, T type, alpha 1I subunit [Source:ZFIN;Acc:ZDB-GENE-060503-324]
43. si:dkey-285e18.6 ENSDARG00000098144 1 1 - - - - - - - - 1.000 si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
44. ifnphi1 ENSDARG00000025607 6 1 - - - - - - - - 1.000 interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
45. or110-2 ENSDARG00000091172 1 1 - - - - - - - - 1.000 odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
46. CT573356.3 CT573356.3 2 1 - - - - - - - - 1.000
47. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - 1.000 - - - - -
48. adrb3b ENSDARG00000052919 16 1 - - - - - - - - 1.000 adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
49. itga2.2 ENSDARG00000062974 27 1 - - - 1.000 - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
50. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - - 1.000 - - - - - -
51. cnga3b ENSDARG00000012297 2 1 - - 1.000 - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
52. mrap ENSDARG00000091992 9 1 - - - - - - - - 1.000 melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
53. naa40_1 ENSDARG00000024109, ENSDARG00000090570 1 1 - - 1.000 - - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
54. guca1g ENSDARG00000045737, ENSDARG00000114717 22 1 - - 1.000 - - - - - - guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
55. si:ch211-284e13.12 ENSDARG00000094492 0 1 - - 1.000 - - - - - - si:ch211-284e13.12 [Source:ZFIN;Acc:ZDB-GENE-060526-158]
56. RASSF7 RASSF7 0 1 - - - - - - - - 1.000
57. zgc:165423 ENSDARG00000052905 1 1 - - - - - - - - 1.000 zgc:165423 [Source:ZFIN;Acc:ZDB-GENE-070720-11]
58. SYNPR ENSDARG00000037587 20 1 - - 1.000 - - - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
59. ssh1a ENSDARG00000056780 3 1 - - - 1.000 - - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
60. tmx3 5 1 - - 1.000 - - - - - - thioredoxin-related transmembrane protein 3
61. CU633991.1 CU633991.1 16 1 - - - 1.000 - - - - -
62. si:ch211-286l10.2 si:ch211-286l10.2 1 1 - - - - - - - - 1.000
63. zgc:165514_1 ENSDARG00000076214 0 1 - - - 1.000 - - - - - zgc:165514 [Source:ZFIN;Acc:ZDB-GENE-041008-169]
64. CR759816.1 ENSDARG00000098977 27 1 - - 1.000 - - - - - -
65. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - - - - 1.000
66. CABZ01067098.1 CABZ01067098.1 1 1 - - - - 1.000 - - - -
67. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 - - - - - - - - 1.000 centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
68. gck ENSDARG00000068006 14 1 - - - 1.000 - - - - - glucokinase (hexokinase 4) [Source:ZFIN;Acc:ZDB-GENE-060825-204]
69. lrguk ENSDARG00000069698 5 1 - - - 1.000 - - - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
70. or115-11 ENSDARG00000053813 0 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-12]
71. si:dkey-24p1.7 ENSDARG00000089404 7 1 - - - 1.000 - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
72. dcst2 ENSDARG00000088693 1 1 - - - - - - - - 1.000 DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
73. fgl2 fgl2 9 1 - - - 1.000 - - - - -
74. prdm6 1 1 - - - 1.000 - - - - - PR domain containing 6
75. CR848788.1 ENSDARG00000103037 1 1 - - 1.000 - - - - - -
76. nitr2b ENSDARG00000000460, ENSDARG00000114513 2 1 - - - 1.000 - - - - - novel immune-type receptor 2b [Source:ZFIN;Acc:ZDB-GENE-001106-6]
77. ABCC3 ENSDARG00000096662 15 1 - - - 1.000 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
78. phc2b ENSDARG00000013224 3 1 - - - 1.000 - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
79. EVI5L ENSDARG00000052766 8 1 - - - 1.000 - - - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
80. aire ENSDARG00000056784 0 1 - - - - - - - - 1.000 autoimmune regulator [Source:ZFIN;Acc:ZDB-GENE-071008-4]
81. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - 1.000 - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
82. FAM183B FAM183B 25 1 - - - - - - - - 1.000
83. BX294653.4 BX294653.4 1 1 - - - 1.000 - - - - -
84. nptx2b ENSDARG00000045164 5 1 - - 1.000 - - - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
85. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 1 - - - 1.000 - - - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
86. KCNMB3 KCNMB3 5 1 - - - - - - - - 1.000
87. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
88. klf9 ENSDARG00000068194 5 1 - - 1.000 - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
89. si:dkey-11f7.5 si:dkey-11f7.5 0 1 - - 1.000 - - - - - -
90. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
91. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - 1.000 - - - - -
92. CT583625.3 ENSDARG00000095148 0 1 - - - 1.000 - - - - -
93. CR391998.1 ENSDARG00000091817 15 1 - - - - - - - - 1.000 putative protein TPRXL [Source:NCBI gene;Acc:101882255]
94. CU929036.1 CU929036.1 7 1 - - 1.000 - - - - - -
95. AL935296.1 AL935296.1 4 1 - - - - - - - - 1.000
96. si:ch211-176m18.1 si:ch211-176m18.1 27 1 - - 1.000 - - - - - -
97. CT990567.1 ENSDARG00000100384 0 1 - - - - - - - - 1.000
98. si:ch73-138e16.7 si:ch73-138e16.7 0 1 - - - - - - - - 1.000
99. chia.4 ENSDARG00000008541 14 1 - - - 1.000 - - - - - chitinase, acidic.4 [Source:ZFIN;Acc:ZDB-GENE-030131-9279]
100. CU694226.2 CU694226.2 2 1 - - - - - - - - 1.000

There are 504 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA