Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptch1

Gene Name Gene ID Reads Annotation
ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]










Genes with expression patterns similar to ptch1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
2. nkx6.1 ENSDARG00000022569 3779 2.228 0.750 - - 0.772 - - 0.706 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
3. ptpn23a ENSDARG00000070124 1206 1.792 - - - 0.926 - - - - 0.866 protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
4. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 1.791 - - - 0.924 - - - - 0.867 zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
5. ppig ENSDARG00000044431 3427 1.778 - - - 0.933 - - - - 0.845 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
6. syt3 ENSDARG00000075830 430 1.758 - - - 0.951 0.807 - - - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
7. rybpa ENSDARG00000037773 904 1.748 0.852 - - 0.896 - - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
8. TTC17 ENSDARG00000044812 124 1.742 - - - 0.968 0.774 - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
9. sfi1 ENSDARG00000053992 1075 1.739 - 0.785 - 0.954 - - - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
10. TP53BP2 TP53BP2 217 1.738 - 0.763 - 0.975 - - - - -
11. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.733 - - - 0.859 - - - - 0.874 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
12. BX000999.4_1 BX000999.4_1 222 1.718 - - - 0.971 0.747 - - - -
13. unc119b ENSDARG00000044362 1528 1.696 0.819 - - 0.877 - - - - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
14. nup188 ENSDARG00000030022 2398 1.671 - - - 0.818 - - - - 0.853 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
15. trappc2 ENSDARG00000097660 760 1.662 - 0.747 - 0.915 - - - - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
16. FAM114A2 ENSDARG00000079508 1226 1.654 - - - 0.788 - - - - 0.866 family with sequence similarity 114, member A2 [Source:ZFIN;Acc:ZDB-GENE-030131-6308]
17. maf1 ENSDARG00000013122 3365 1.653 - - - 0.805 - - - - 0.848 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
18. prkx ENSDARG00000060716 530 1.652 - 0.773 - 0.879 - - - - - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
19. myl12.2 ENSDARG00000025326 1887 1.638 - - - - - - 0.781 - 0.857 myosin, light chain 12, genome duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9028]
20. snrnp25 ENSDARG00000020363 588 1.637 - 0.802 - 0.835 - - - - - small nuclear ribonucleoprotein 25 [Source:ZFIN;Acc:ZDB-GENE-050417-179]
21. plagx ENSDARG00000036855 3768 1.636 - - - 0.911 - - 0.725 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
22. prpf8 ENSDARG00000026180 7026 1.633 - - - 0.804 - - - - 0.829 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
23. gpsm1b ENSDARG00000054874 1308 1.631 - - - - - - 0.709 - 0.922 G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
24. uvrag ENSDARG00000023815 424 1.629 - 0.709 - 0.920 - - - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
25. pvrl3l pvrl3l 943 1.624 - - - - - - 0.750 - 0.874
26. CCDC71 CCDC71 2442 1.62 - - - - - - 0.771 - 0.849
27. cap1 ENSDARG00000016350 891 1.604 - 0.816 - - 0.788 - - - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
28. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.602 - - - 0.767 - - - - 0.835 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
29. ubl3b ENSDARG00000021556 1210 1.599 - 0.747 - 0.852 - - - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
30. C8H1orf106 C8H1orf106 2690 1.597 - - - 0.877 - - 0.720 - -
31. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.595 - - - - - - 0.758 - 0.837 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
32. wu:fb30e12 wu:fb30e12 1254 1.591 - 0.836 - 0.755 - - - - -
33. smo ENSDARG00000002952 6411 1.589 - - - 0.887 - - 0.702 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
34. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.584 - - - 0.718 - - - - 0.866 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
35. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.572 - - - - - - 0.768 - 0.804 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
36. kif1ab ENSDARG00000062024 794 1.568 - 0.841 - - - - - 0.727 - kinesin family member 1Ab [Source:ZFIN;Acc:ZDB-GENE-070912-480]
37. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 1.566 - 0.861 - - - - 0.705 - - transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
38. SYMPK ENSDARG00000059553 1159 1.559 - 0.775 - - - - - 0.784 - symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
39. tpt1 ENSDARG00000092693 1110 1.557 - 0.713 - 0.844 - - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
40. samd1a ENSDARG00000102810 1037 1.556 - - - 0.755 - - - 0.801 - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
41. negr1 ENSDARG00000021607 1051 1.551 - 0.817 - - - - 0.734 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
42. als2b ENSDARG00000076924 738 1.546 - - - 0.812 - - - 0.734 - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
43. rpa1 ENSDARG00000003938 4403 1.545 - - - - - 0.712 - - 0.833 replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
44. zcchc17 ENSDARG00000018936 1577 1.543 - - - 0.785 - - - 0.758 - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
45. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.539 0.747 - - 0.792 - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
46. eprs ENSDARG00000060494 4729 1.535 - - - - - - 0.703 - 0.832 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
47. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.533 - - - - - - 0.702 - 0.831 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
48. slit1a ENSDARG00000044954 3810 1.529 - - - - - - 0.713 - 0.816 slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
49. meis2b ENSDARG00000077840 5166 1.527 - - - 0.818 - - 0.709 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
50. wasf3 wasf3 3287 1.527 - - - - - - 0.705 - 0.822
51. BX927290.1 BX927290.1 389 1.518 - - - 0.799 0.719 - - - -
52. ube2e2 ENSDARG00000034670 5918 1.514 - - - 0.788 - - 0.726 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
53. fam184a ENSDARG00000014081 93 1.507 0.736 0.771 - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
54. csk ENSDARG00000067996 834 1.496 - 0.763 - - 0.733 - - - - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
55. scg2b ENSDARG00000038574 345 1.488 - - - - 0.770 - 0.718 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
56. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.479 - 0.764 - - - - 0.715 - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
57. scnm1 ENSDARG00000003027 256 1.476 - 0.762 - - - - - 0.714 - sodium channel modifier 1 [Source:ZFIN;Acc:ZDB-GENE-030131-415]
58. atp1b2a ENSDARG00000099203 4010 1.441 - - - 0.712 - - 0.729 - - ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
59. map7d3 ENSDARG00000060771 1739 1.439 - - - 0.703 - - - 0.736 - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
60. CYYR1 ENSDARG00000103783 4107 1.435 - - - 0.727 - 0.708 - - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
61. mnx2b ENSDARG00000030350 484 1.434 0.728 - - - - - 0.706 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
62. ek1 ENSDARG00000020080 742 1.43 0.718 - - - - - 0.712 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
63. carf ENSDARG00000019950 303 1.425 - 0.723 - - 0.702 - - - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
64. sertad2a ENSDARG00000093412 503 1.416 - 0.715 - - - - 0.701 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
65. zic1 ENSDARG00000015567 2520 1.416 - 0.700 - - - - 0.716 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
66. narfl ENSDARG00000062216 768 1.405 - 0.704 - - - - 0.701 - - nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
67. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.985 - - - - - - - - 0.985 amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
68. wipi1 ENSDARG00000040657 2732 0.979 - - - - - - - - 0.979 WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
69. znf710a ENSDARG00000014680 582 0.977 - - - 0.977 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
70. RSL1D1 ENSDARG00000055868, ENSDARG00000115696 3825 0.975 - - - - - - - - 0.975 ribosomal L1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130603-67]
71. ADCY3 ADCY3 537 0.975 - - - 0.975 - - - - -
72. JMJD1C JMJD1C 289 0.975 - - - 0.975 - - - - -
73. zgc:165525 zgc:165525 207 0.974 - - - 0.974 - - - - -
74. nr4a2b ENSDARG00000044532 103 0.974 - - - 0.974 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
75. tuba4l ENSDARG00000074289 101 0.973 - - - 0.973 - - - - - tubulin, alpha 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-5588]
76. rs1 rs1 70 0.973 - - - 0.973 - - - - -
77. tdrd3 ENSDARG00000025421 633 0.973 - - - 0.973 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
78. aanat2 ENSDARG00000079802 175 0.973 - - - 0.973 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
79. lhx9 ENSDARG00000056979 249 0.973 - - - 0.973 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
80. rapgef5a ENSDARG00000075271 282 0.972 - - - 0.972 - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
81. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 0.972 - - - 0.972 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
82. ppfia2 ENSDARG00000013000 45 0.971 - - - 0.971 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
83. hes2.2 ENSDARG00000068168 197 0.971 - - - 0.971 - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
84. ptk6b ENSDARG00000059956 44 0.971 - - - 0.971 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
85. tuba7l ENSDARG00000104643 33 0.971 - - - 0.971 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
86. rims2a ENSDARG00000101606 1088 0.971 - - - 0.971 - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
87. wasb ENSDARG00000026350 139 0.971 - - - 0.971 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
88. tmem104 ENSDARG00000088560 859 0.971 - - - 0.971 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
89. cep76 ENSDARG00000058319 143 0.971 - - - 0.971 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
90. znhit2 ENSDARG00000030805 197 0.971 - - - 0.971 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
91. far1 ENSDARG00000006899 204 0.971 - - - 0.971 - - - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
92. GPR180 73 0.97 - - - 0.970 - - - - - G protein-coupled receptor 180, transcript variant X2
93. SYNGAP1_1 SYNGAP1_1 66 0.97 - - - 0.970 - - - - -
94. si:ch211-59m15.1 87 0.97 - - - 0.970 - - - - - si:ch211-59m15.1
95. rexo1 ENSDARG00000026986 770 0.97 - - - 0.970 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
96. gnav1 ENSDARG00000043006 305 0.97 - - - 0.970 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
97. eef1a1a ENSDARG00000039502 234 0.97 - - - 0.970 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
98. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 0.97 - - - 0.970 - - - - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
99. ftr65 202 0.97 - - - 0.970 - - - - - finTRIM family, member 65
100. HTRA4 ENSDARG00000005943 77 0.97 - - - 0.970 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]

There are 1514 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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