Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptcd3

Gene Name Gene ID Reads Annotation
ptcd3 ENSDARG00000103856 2107 pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]










Genes with expression patterns similar to ptcd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptcd3 ENSDARG00000103856 2107 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
2. cdv3 ENSDARG00000023028 12380 2.628 - 0.960 0.922 - - - 0.746 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
3. C19H1orf85 C19H1orf85 1587 1.973 - 0.978 0.995 - - - - - -
4. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.797 - 0.950 - - - - 0.847 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
5. MRPL21 ENSDARG00000003846 3244 1.796 - - 0.992 - - - 0.804 - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
6. STARD7 ENSDARG00000074858 889 1.777 - 0.981 - - - - 0.796 - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
7. si:dkey-82i20.5 ENSDARG00000116717 2965 1.775 - - 0.980 - - 0.795 - - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
8. ck2b ck2b 781 1.749 - - 0.996 - - - 0.753 - -
9. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.745 - 0.824 0.921 - - - - - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
10. ipo7 ENSDARG00000035751 7095 1.743 - - 0.918 - - - 0.825 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
11. hccs hccs 1758 1.741 - 0.985 - - - - 0.756 - -
12. fkbp7 ENSDARG00000010962 2986 1.735 - - 0.980 - - - 0.755 - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
13. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.73 - 0.959 - - - - 0.771 - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
14. fscn1a ENSDARG00000059680 3999 1.719 - - 0.992 - - - 0.727 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
15. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.714 - 0.971 - - - - 0.743 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
16. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.714 - - 0.989 - - - 0.725 - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
17. abi1b ENSDARG00000062991 1564 1.708 0.713 - 0.995 - - - - - - abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
18. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.708 - 0.961 - - - - 0.747 - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
19. gars ENSDARG00000059070 17015 1.707 - 0.886 - - - - 0.821 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
20. si:ch211-209n20.57 si:ch211-209n20.57 1188 1.704 - - 0.996 - - - 0.708 - -
21. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.702 0.728 0.974 - - - - - - - ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
22. cdkn1c cdkn1c 17427 1.701 - 0.895 0.806 - - - - - -
23. abcf1 ENSDARG00000031795 8635 1.697 - 0.874 - - - - 0.823 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
24. bysl ENSDARG00000001057 2621 1.695 - - 0.875 - - - 0.820 - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
25. NDNF ENSDARG00000062936 7287 1.694 - - 0.890 - - - 0.804 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
26. eef1db ENSDARG00000030053 5185 1.674 - 0.927 - - - - 0.747 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
27. uqcrc2a ENSDARG00000014794 3949 1.628 - - - - - - 0.827 0.801 - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
28. uck2b ENSDARG00000022213 1542 1.622 0.806 - - - - - 0.816 - - uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
29. flncb ENSDARG00000018820 5595 1.617 - 0.909 - - - - 0.708 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
30. ARHGEF25 ARHGEF25 1159 1.608 0.736 - - - - - 0.872 - -
31. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.572 0.830 - - - - - 0.742 - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
32. cct3 ENSDARG00000016173 15869 1.569 - 0.804 - - - - 0.765 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
33. eif2s1b ENSDARG00000052178 11961 1.566 - 0.795 - - - - 0.771 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
34. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.549 - - - - - 0.723 0.826 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
35. atp5j 4272 1.548 - - - - - 0.729 0.819 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
36. kpnb3 ENSDARG00000040245 7967 1.546 0.751 - - - - - 0.795 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
37. eif3i ENSDARG00000017445 21149 1.517 - - 0.753 - - - 0.764 - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
38. isoc2 ENSDARG00000013371 1378 1.507 - - - - - 0.748 0.759 - - isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
39. eprs ENSDARG00000060494 4729 1.504 - - - - - - 0.705 0.799 - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
40. slc27a1a ENSDARG00000006240, ENSDARG00000109799 1471 1.502 - - - - - 0.729 0.773 - - solute carrier family 27 (fatty acid transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050320-112]
41. sdhb ENSDARG00000075768 5493 1.489 0.701 - - - - - 0.788 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
42. cct4 ENSDARG00000013475 23959 1.489 - 0.702 0.787 - - - - - - chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
43. ZNF710 ZNF710 766 1.486 0.704 - - - - - 0.782 - -
44. znf503 ENSDARG00000018492 5974 1.485 0.752 - - - - - 0.733 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
45. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.474 0.756 - - - - - 0.718 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
46. slc20a1b ENSDARG00000010641 2564 1.47 0.713 - - - - - 0.757 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
47. atp5e 14858 1.469 - - - 0.711 - - 0.758 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
48. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.441 0.712 - - - - - 0.729 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
49. pole ENSDARG00000058533, ENSDARG00000115430 381 1.432 0.700 - - - - - - 0.732 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
50. C25H12orf73 C25H12orf73 2031 1.429 0.723 - - - - - 0.706 - -
51. prex1 ENSDARG00000075793 1017 1.426 - - - - - 0.725 0.701 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1428]
52. CABZ01066957.1 CABZ01066957.1 161 1.409 - - - - - - 0.705 0.704 -
53. fam102aa ENSDARG00000102566 903 0.996 - - 0.996 - - - - - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
54. taf1b ENSDARG00000028937 879 0.996 - - 0.996 - - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
55. LPL_1 LPL_1 1150 0.996 - - 0.996 - - - - - -
56. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.996 - - 0.996 - - - - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
57. TACC2 1702 0.996 - - 0.996 - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
58. mfsd11 ENSDARG00000102828 1043 0.996 - - 0.996 - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
59. CU638868.1 ENSDARG00000115797 487 0.996 - - 0.996 - - - - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
60. kifc3 ENSDARG00000054978 1220 0.996 - - 0.996 - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
61. trim36 ENSDARG00000062794 785 0.996 - - 0.996 - - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
62. pih1d2 ENSDARG00000014849 389 0.996 - - 0.996 - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
63. suv420h2 2186 0.996 - - 0.996 - - - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
64. acox1 ENSDARG00000014727 660 0.996 - - 0.996 - - - - - - acyl-CoA oxidase 1, palmitoyl [Source:ZFIN;Acc:ZDB-GENE-041010-219]
65. si:ch73-7i4.1 ENSDARG00000094554 771 0.996 - - 0.996 - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
66. si:ch73-303g23.4 si:ch73-303g23.4 386 0.996 - - 0.996 - - - - - -
67. PKP3 PKP3 391 0.996 - - 0.996 - - - - - -
68. jph2 ENSDARG00000028625 6706 0.996 - - 0.996 - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
69. tmem223 ENSDARG00000069494 1528 0.996 - - 0.996 - - - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
70. PEG3_5 PEG3_5 1624 0.995 - - 0.995 - - - - - -
71. txnipb ENSDARG00000070000 2365 0.995 - - 0.995 - - - - - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
72. dhx38 ENSDARG00000100013 1854 0.995 - - 0.995 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
73. sp3b ENSDARG00000007812 2928 0.995 - - 0.995 - - - - - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
74. bre bre 1233 0.995 - - 0.995 - - - - - -
75. pip5k1aa ENSDARG00000100396 1644 0.995 - - 0.995 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
76. atpaf1 ENSDARG00000042799 1309 0.995 - - 0.995 - - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
77. zgc:195282 ENSDARG00000079488 475 0.995 - - 0.995 - - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
78. si:dkey-94l16.4 ENSDARG00000090142 791 0.995 - - 0.995 - - - - - - si:dkey-94l16.4 [Source:ZFIN;Acc:ZDB-GENE-121214-291]
79. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.995 - - 0.995 - - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
80. dlg1l ENSDARG00000102216 1960 0.995 - - 0.995 - - - - - - discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
81. coa5 ENSDARG00000094833 1988 0.995 - - 0.995 - - - - - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
82. si:dkey-57a22.11 ENSDARG00000092651 660 0.995 - - 0.995 - - - - - - si:dkey-57a22.11 [Source:ZFIN;Acc:ZDB-GENE-081104-423]
83. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.994 - - 0.994 - - - - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
84. brms1la ENSDARG00000006235 2011 0.994 - - 0.994 - - - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
85. C3H19orf43 C3H19orf43 2961 0.994 - - 0.994 - - - - - -
86. exoc5 ENSDARG00000060323 2450 0.994 - - 0.994 - - - - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
87. numb ENSDARG00000027279 2905 0.994 - - 0.994 - - - - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
88. usp44 ENSDARG00000089861 1532 0.994 - - 0.994 - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
89. c8b ENSDARG00000039517 1731 0.994 - - 0.994 - - - - - - complement component 8, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-070912-163]
90. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.994 - - 0.994 - - - - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
91. CABZ01013938.1 CABZ01013938.1 4497 0.994 - - 0.994 - - - - - -
92. hug 4100 0.994 - - 0.994 - - - - - - HuG, transcript variant X2
93. plekhh1 ENSDARG00000053835 2123 0.994 - - 0.994 - - - - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
94. syngr2a ENSDARG00000052429 3431 0.993 - - 0.993 - - - - - - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
95. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 0.993 - - 0.993 - - - - - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
96. fosl2 ENSDARG00000040623 2041 0.993 - - 0.993 - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
97. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 0.992 - 0.992 - - - - - - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
98. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.992 - - 0.992 - - - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
99. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.991 - - 0.991 - - - - - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
100. UBE2QL1 ENSDARG00000079276 3474 0.99 - - 0.990 - - - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]

There are 977 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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