Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptcd2

Gene Name Gene ID Reads Annotation
ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]










Genes with expression patterns similar to ptcd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
2. klhl24 klhl24 40 2 - - - - - 1.000 1.000 - -
3. BX322608.1 ENSDARG00000111690 326 1.987 - - - - - 1.000 - - 0.987
4. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.978 - - - - - 1.000 - - 0.978
5. LRRC71 LRRC71 11 1.963 - - - - - 1.000 - - 0.963
6. si:ch211-71k24.5 si:ch211-71k24.5 9 1.958 - 0.958 - - - 1.000 - - -
7. slc6a11a ENSDARG00000074002 189 1.958 - 0.958 - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
8. CMA1_9 CMA1_9 1 1.953 - - - - 0.953 1.000 - - -
9. kcnj1a.2 ENSDARG00000090866 8 1.936 - 0.936 - - - - 1.000 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
10. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 1.919 - 0.958 - - - - - - 0.961 cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
11. si:ch211-229o8.4 si:ch211-229o8.4 1 1.914 - - - - 0.914 1.000 - - -
12. ENSDARG00000086059 ENSDARG00000086059 9 1.914 - - - - 0.914 1.000 - - -
13. CR339051.1 CR339051.1 9 1.863 - - - - - 1.000 - 0.863 -
14. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 1.82 - 0.935 - - - - 0.885 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
15. CR792453.3 ENSDARG00000110328 5 1.785 - - - - - 1.000 - 0.785 - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
16. GPRIN1 10 1.783 - - - - - - 1.000 0.783 - G protein regulated inducer of neurite outgrowth 1
17. RNF14_3 RNF14_3 15 1.772 - - 0.772 - - 1.000 - - -
18. si:dkey-63d15.12 ENSDARG00000075480 9 1.742 - - - - 0.742 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
19. si:ch211-89f22.1 si:ch211-89f22.1 11 1.741 - - - - - 1.000 - 0.741 -
20. camsap1a ENSDARG00000019208 137 1.74 - 0.936 - - - 0.804 - - - calmodulin regulated spectrin-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-060518-4]
21. VDAC3 ENSDARG00000003695 34 1.735 - - - 0.735 1.000 - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
22. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1.735 - - - 0.735 - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
23. ZP2_2 ZP2_2 28 1.732 - - - 0.732 - 1.000 - - -
24. kin ENSDARG00000045515 109 1.729 - 0.865 - - - 0.864 - - - Kin17 DNA and RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3689]
25. si:ch211-255i3.4 ENSDARG00000095152 7 1.728 - - - - - 1.000 - - 0.728 si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
26. osbp2 ENSDARG00000053487 42 1.727 - 0.958 - - - - - 0.769 - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
27. gpr75 ENSDARG00000098526 32 1.722 - - - - - 0.722 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
28. anxa5a ENSDARG00000026406 19 1.722 - 0.958 - - - 0.764 - - - annexin A5a [Source:ZFIN;Acc:ZDB-GENE-080220-29]
29. si:ch211-260c23.1 13 1.717 - - - - 0.717 1.000 - - - si:ch211-260c23.1, transcript variant X7
30. CR846080.4 CR846080.4 6 1.709 - - - - - 1.000 0.709 - -
31. CMTM8 CMTM8 71 1.706 - - - 0.706 - - 1.000 - -
32. HEATR2_1 HEATR2_1 166 1.687 - 0.863 - - - 0.824 - - -
33. ITIH4 ITIH4 9 1.686 - 0.951 - 0.735 - - - - -
34. CNTLN ENSDARG00000033345 128 1.683 - 0.853 - - - 0.830 - - - centlein, centrosomal protein [Source:ZFIN;Acc:ZDB-GENE-090313-409]
35. SLITRK5 SLITRK5 122 1.634 - 0.878 - - - 0.756 - - -
36. CDC42EP1 CDC42EP1 50 1.633 - - 0.811 - - 0.822 - - -
37. si:dkeyp-23e4.3 ENSDARG00000074819 42 1.621 - - 0.813 - - - 0.808 - - si:dkeyp-23e4.3 [Source:ZFIN;Acc:ZDB-GENE-091118-19]
38. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.607 - 0.830 0.777 - - - - - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
39. ARMC6 ENSDARG00000103770 39 1.59 - 0.846 - - - - - 0.744 - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
40. vwa2 ENSDARG00000075441 44 1.548 - 0.807 - - - - 0.741 - - von Willebrand factor A domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100302-1]
41. pigm ENSDARG00000024277 86 1.543 - - - - 0.786 - - - 0.757 phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
42. ntng2a ENSDARG00000077367 43 1.494 - - 0.730 - - 0.764 - - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
43. BEND2 BEND2 92 1.455 - - 0.705 - - 0.750 - - -
44. znhit3 ENSDARG00000023950 61 1.453 - 0.723 - - - - - - 0.730 zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
45. si:ch211-258f1.3 ENSDARG00000105119 23 1 - - - - - 1.000 - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
46. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
47. AL844567.1_1 AL844567.1_1 34 1 - - - - - 1.000 - - -
48. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - - 1.000 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
49. zgc:92161 ENSDARG00000101749 27 1 - - - - - 1.000 - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
50. gpr12 ENSDARG00000062934 7 1 - - - - - 1.000 - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
51. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
52. fam151a ENSDARG00000058218 40 1 - - - - - - 1.000 - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
53. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
54. LRRK1_1 LRRK1_1 11 1 - - - - - 1.000 - - -
55. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - - - 1.000 - -
56. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
57. BX548000.1 ENSDARG00000099044 45 1 - - - - - 1.000 - - -
58. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - 1.000 - - -
59. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
60. si:dkey-111b14.2 si:dkey-111b14.2 25 1 - - - - - 1.000 - - -
61. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
62. rpz3 ENSDARG00000069728 11 1 - - - - - 1.000 - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
63. TXNRD2 TXNRD2 14 1 - - - - - - 1.000 - -
64. ebf1b ENSDARG00000069196 64 1 - - - - - - 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
65. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
66. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
67. ROCK2 ROCK2 8 1 - - - - - - 1.000 - -
68. ENDOD1_1 ENDOD1_1 0 1 - - - - - - 1.000 - -
69. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
70. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - 1.000 - - -
71. CU459095.1 CU459095.1 7 1 - - - - - 1.000 - - -
72. cngb3 cngb3 12 1 - - - - - 1.000 - - -
73. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
74. ahr1b ENSDARG00000023537 44 1 - - - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
75. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
76. TRIM14_12 TRIM14_12 1 1 - - - - - - 1.000 - -
77. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
78. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
79. si:dkey-40n15.1 ENSDARG00000116117 1 1 - - - - - 1.000 - - - si:dkey-40n15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-64]
80. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
81. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
82. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
83. th2 ENSDARG00000038384 1 1 - - - - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
84. gpr155a ENSDARG00000090804 27 1 - - - - - - 1.000 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
85. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
86. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
87. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
88. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1 - - - - - - 1.000 - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
89. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
90. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
91. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
92. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
93. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
94. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
95. leprel4 leprel4 34 1 - - - - - 1.000 - - -
96. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
97. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
98. si:dkey-11o15.5 ENSDARG00000095592 1 1 - - - - 1.000 - - - - si:dkey-11o15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-172]
99. KSR1 KSR1 8 1 - - - - - - 1.000 - -
100. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]

There are 1138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA