Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ptbp2b

Gene Name Gene ID Reads Annotation
ptbp2b ENSDARG00000015901 2458 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]










Genes with expression patterns similar to ptbp2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptbp2b ENSDARG00000015901 2458 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
2. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 3.333 0.832 - - 0.946 - 0.820 - - 0.735 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
3. dpysl5a ENSDARG00000011141 1827 3.33 0.813 - - - - 0.865 0.820 - 0.832 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
4. hnrnpub ENSDARG00000004735 16496 3.288 0.756 - - - - 0.809 0.854 - 0.869 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
5. hmgb3a ENSDARG00000056725 15668 3.257 0.770 - - - - 0.825 0.892 - 0.770 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
6. si:ch73-21g5.7 ENSDARG00000093156 9412 3.209 0.734 - - - - 0.931 0.841 0.703 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
7. sox2 ENSDARG00000070913 2763 3.191 0.712 - 0.715 - - 0.906 0.858 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
8. st18 663 3.189 - - - - - 0.907 0.835 0.704 0.743 suppression of tumorigenicity 18, zinc finger
9. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 3.183 0.714 - - - - 0.881 0.874 - 0.714 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
10. unc119b ENSDARG00000044362 1528 3.181 0.709 - - - - 0.771 0.886 - 0.815 unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
11. tuba1c ENSDARG00000055216 8384 3.172 0.727 - - - - 0.817 0.820 - 0.808 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
12. tuba2 ENSDARG00000045014 1490 3.169 0.708 - - - - 0.922 0.780 - 0.759 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
13. dpysl4 ENSDARG00000103490 534 3.167 0.735 - - - - 0.819 0.829 - 0.784 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
14. khsrp ENSDARG00000026489 15738 3.121 - - - 0.816 - 0.833 0.765 - 0.707 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
15. fam60al 2846 3.115 0.735 - - - - 0.840 0.823 - 0.717 family with sequence similarity 60, member A, like
16. vim ENSDARG00000010008 3551 3.113 0.718 0.818 - - - 0.785 0.792 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
17. msi1 ENSDARG00000010710 2634 3.108 0.783 - - - - 0.743 0.789 0.793 - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
18. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 3.097 - - - - - 0.706 0.914 0.737 0.740 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
19. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 3.057 0.740 - - - - 0.705 0.806 - 0.806 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
20. polb ENSDARG00000003749 2049 3.04 - 0.743 - - - 0.818 0.778 - 0.701 polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
21. clvs2 ENSDARG00000053122 1390 3.035 0.740 - - - - - 0.825 0.750 0.720 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
22. fez1 ENSDARG00000023174 701 2.967 - - - - - 0.792 0.701 0.733 0.741 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
23. atp2b3b ENSDARG00000023445 1424 2.701 - - - 0.983 - 0.868 0.850 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
24. plp1a ENSDARG00000103732 3544 2.668 - - - - - 0.930 0.856 0.882 - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
25. exoc6 ENSDARG00000020521 1533 2.623 - - - 0.990 - 0.813 0.820 - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
26. DTX4 ENSDARG00000076302 2642 2.622 - - - - - 0.921 0.897 0.804 - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
27. pcdh1gc5 ENSDARG00000104826 10052 2.584 0.850 - - - - 0.878 0.856 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
28. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.576 - - - - - 0.834 0.923 0.819 - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
29. cdkn1c cdkn1c 17427 2.565 0.788 - - 0.980 - - 0.797 - -
30. mex3b ENSDARG00000058369 1867 2.557 - - - - - 0.848 0.891 0.818 - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
31. CYTH2 ENSDARG00000028800 2349 2.556 - - - - - 0.910 0.851 - 0.795 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
32. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.556 0.835 - - - - 0.866 0.855 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
33. AKT3 AKT3 1729 2.536 - - - - - 0.829 0.836 0.871 -
34. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.532 - - - - - 0.917 0.794 - 0.821 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
35. mir10d-1 mir10d-1 860 2.53 0.793 - - - - 0.884 0.853 - -
36. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.513 - - - - - - 0.834 0.817 0.862 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
37. rap2ip rap2ip 681 2.505 - - - - - 0.875 0.876 - 0.754
38. sumo3a ENSDARG00000028119 13447 2.505 - - - - - 0.905 0.784 - 0.816 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
39. tnika ENSDARG00000056218 728 2.503 0.788 - - - - 0.889 0.826 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
40. CABZ01072954.1 CABZ01072954.1 2330 2.493 0.757 - - - - 0.890 0.846 - -
41. slc1a3a ENSDARG00000104431 9888 2.491 0.792 - - - - 0.847 0.852 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
42. cldn5a ENSDARG00000043716 3865 2.49 0.825 - - - - 0.851 0.814 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
43. atcaya ENSDARG00000071678 344 2.489 0.803 - - - - 0.925 0.761 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
44. nrarpb ENSDARG00000018958 6225 2.485 - - - - - 0.837 0.873 - 0.775 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
45. yaf2 ENSDARG00000015966 1905 2.482 - 0.755 - 0.989 - - - - 0.738 YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
46. vezf1a ENSDARG00000008247 1449 2.478 - - - - - 0.861 0.811 - 0.806 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
47. ADAM22 ENSDARG00000060532 2259 2.477 - - - - - 0.931 0.842 0.704 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
48. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.477 - - - - - 0.820 0.836 - 0.821 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
49. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 2.475 0.822 - - - - 0.801 0.852 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
50. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.472 0.733 - - - - 0.888 0.851 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
51. atp6v0cb ENSDARG00000036577 3472 2.471 - - - - - 0.849 0.876 - 0.746 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
52. dacha ENSDARG00000010132 648 2.471 0.715 - - - - 0.898 0.858 - - dachshund a [Source:ZFIN;Acc:ZDB-GENE-020402-3]
53. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.467 0.726 - - - - 0.905 0.836 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
54. celf3a ENSDARG00000034668 2432 2.463 - - - - - 0.872 0.750 - 0.841 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
55. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.457 0.799 - - - - - 0.825 - 0.833 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
56. cnrip1a ENSDARG00000091683 1491 2.453 - - - - - 0.891 0.847 0.715 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
57. tmsb ENSDARG00000054911 6411 2.453 0.745 - - - - 0.852 0.856 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
58. TTYH1 ENSDARG00000076804 399 2.451 - - - - - 0.907 0.768 - 0.776 tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
59. nrn1a ENSDARG00000071860 1311 2.451 - - - - - 0.884 0.859 0.708 - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
60. dla ENSDARG00000010791 9281 2.446 0.804 - - - - - 0.845 - 0.797 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
61. tspan5a ENSDARG00000086033 1865 2.444 0.785 - - - - 0.870 0.789 - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
62. PROCA1 ENSDARG00000069823 343 2.443 0.749 - - - - 0.876 0.818 - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
63. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.443 0.809 - - - - 0.907 0.727 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
64. ppp3ca ENSDARG00000004988 615 2.441 0.751 - - - - 0.916 0.774 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
65. atp1b4 ENSDARG00000053262 1337 2.437 0.726 - - - - 0.917 0.794 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
66. ndrg4 ENSDARG00000103937 1234 2.437 - - - - - 0.870 0.758 - 0.809 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
67. C24H17orf96 C24H17orf96 1538 2.437 - - - - - - 0.892 0.792 0.753
68. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.433 0.724 - - - - 0.816 0.893 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
69. necap1 ENSDARG00000020798 612 2.43 0.742 - - - - 0.833 0.855 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
70. fscn1a ENSDARG00000059680 3999 2.426 - 0.848 - - - 0.849 0.729 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
71. ek1 ENSDARG00000020080 742 2.424 - - - - - 0.862 0.851 - 0.711 eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
72. scocb ENSDARG00000002217 1844 2.424 - - - - - 0.923 0.731 - 0.770 short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
73. gap43 ENSDARG00000099744 4114 2.423 - - - - - 0.854 0.791 - 0.778 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
74. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.422 0.704 - - - - 0.884 0.834 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
75. tox ENSDARG00000032317 9126 2.42 - - - - - 0.736 0.855 - 0.829 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
76. si:dkey-25e11.10 si:dkey-25e11.10 955 2.411 0.735 - - - - 0.869 0.807 - -
77. TMEM57 TMEM57 260 2.411 - - - - - 0.822 0.800 - 0.789
78. foxk2 ENSDARG00000030583 2982 2.41 - 0.881 - - - - 0.751 - 0.778 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
79. gpr144 gpr144 479 2.405 0.815 - - - - 0.810 0.780 - -
80. rtn1b ENSDARG00000021143 1682 2.4 - - - - - 0.861 0.834 - 0.705 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
81. AGO1 ENSDARG00000092644 4521 2.396 0.812 - - - - - 0.856 - 0.728 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
82. coe2 coe2 1633 2.394 - - - - - 0.807 0.811 - 0.776
83. ELOVL4 ELOVL4 3026 2.392 0.765 - - - - - 0.809 - 0.818
84. gabra5 ENSDARG00000070730 156 2.385 0.747 - - - - 0.784 0.854 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
85. ube2d2l ENSDARG00000099749 1462 2.383 - 0.797 - - - 0.878 0.708 - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
86. sema6a ENSDARG00000102165 1401 2.381 - - - - - 0.742 0.866 - 0.773 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
87. stap2a ENSDARG00000092810 591 2.378 - - - - - 0.922 0.736 - 0.720 signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
88. pcsk1 ENSDARG00000002600 404 2.378 0.831 - - - - 0.748 0.799 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
89. fzd3a ENSDARG00000021664 1958 2.373 0.748 - - - - - 0.860 - 0.765 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
90. ZFHX3 ENSDARG00000103057 7759 2.373 0.744 - - - - 0.805 0.824 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
91. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.371 - - - - - 0.880 0.764 - 0.727
92. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.366 - 0.754 - - - 0.819 0.793 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
93. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.364 0.713 - - - - 0.884 0.767 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
94. RASGRF2 RASGRF2 644 2.364 - - - - - 0.821 0.806 - 0.737
95. si:ch211-202e12.3 401 2.364 - - - - - 0.886 - 0.739 0.739 si:ch211-202e12.3, transcript variant X6
96. mllt11 ENSDARG00000071026 2518 2.362 - - - - - 0.849 0.773 - 0.740 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
97. TUBB8P7_1 TUBB8P7_1 2722 2.361 - - - - - 0.769 0.832 0.760 -
98. npm1b ENSDARG00000037675 5448 2.359 - - - - - 0.916 0.743 - 0.700 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
99. nadl1.1 1200 2.357 - - - - - 0.778 0.831 - 0.748 neural adhesion molecule L1.1, transcript variant X1
100. xpr1 xpr1 840 2.355 - - - - - 0.826 0.742 0.787 -

There are 2675 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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