Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ptbp1b

Gene Name Gene ID Reads Annotation
ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]










Genes with expression patterns similar to ptbp1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
2. rwdd ENSDARG00000068256 964 2.948 0.745 - - - - 0.762 0.723 - 0.718 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
3. ppp1r12a ENSDARG00000010784 4333 2.569 - 0.987 - - 0.765 0.817 - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
4. mob3a ENSDARG00000019113 2551 2.543 0.840 0.992 - - - - 0.711 - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
5. TEAD3 TEAD3 8614 2.493 - 0.979 - - 0.761 0.753 - - -
6. IL17RD ENSDARG00000098359 2309 2.451 0.732 0.994 - - - 0.725 - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
7. mycbp ENSDARG00000091001 1511 2.372 0.777 - - - 0.720 - 0.875 - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
8. rerea ENSDARG00000077353 4162 2.246 0.740 - 0.783 - - - - - 0.723 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
9. TNRC6B ENSDARG00000074161 2464 2.225 - - 0.752 - 0.705 - - - 0.768 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
10. usp49 ENSDARG00000000229 706 2.2 0.757 - - - 0.726 - - - 0.717 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
11. mllt4 mllt4 2939 1.769 0.777 0.992 - - - - - - -
12. si:ch211-286b5.5 ENSDARG00000096661 3136 1.75 0.757 0.993 - - - - - - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
13. wnt5b ENSDARG00000102464 1662 1.749 - 0.992 0.757 - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
14. nufip2 ENSDARG00000069066 3965 1.736 - 0.992 - - - 0.744 - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
15. yif1a ENSDARG00000019636 2215 1.722 - 0.979 - - - 0.743 - - - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
16. map2 ENSDARG00000055052 6062 1.72 - 0.992 - - 0.728 - - - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
17. ENSDARG00000087348 ENSDARG00000087348 2870 1.716 - 0.993 - - - 0.723 - - -
18. metap2b_1 ENSDARG00000102571 5507 1.704 - 0.986 - - - 0.718 - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
19. mrps30 ENSDARG00000104111 2900 1.694 - 0.991 - - - 0.703 - - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
20. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.691 - 0.978 - - 0.713 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
21. eif3g ENSDARG00000016889 10367 1.68 - 0.973 - - - - 0.707 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
22. hug 4100 1.662 - 0.919 - - - - 0.743 - - HuG, transcript variant X2
23. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 1.612 - 0.901 - - - - 0.711 - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
24. ccng2 ENSDARG00000017602 3141 1.599 0.794 - 0.805 - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
25. fgfr1a ENSDARG00000011027 2705 1.599 - - 0.747 - - - - - 0.852 fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
26. FP102272.1 FP102272.1 9473 1.593 0.837 - - - - 0.756 - - -
27. brd3a ENSDARG00000006527 1636 1.587 0.798 - - - - - - - 0.789 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
28. magt1 ENSDARG00000058062 3903 1.587 0.802 - - - - 0.785 - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
29. SH3D21 ENSDARG00000099448 1726 1.579 0.787 - - - - 0.792 - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
30. prkar1aa ENSDARG00000076128 6565 1.577 - - 0.769 - - 0.808 - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
31. si:ch211-210c8.6 ENSDARG00000017811 908 1.57 0.835 - - - - 0.735 - - - si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
32. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.569 - - - - 0.748 - - 0.821 - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
33. ppl ENSDARG00000101043 9196 1.566 - 0.803 - - - 0.763 - - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
34. paip2b ENSDARG00000008706 4255 1.564 0.784 - 0.780 - - - - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
35. tjp3 ENSDARG00000002909 1978 1.56 0.857 - - - - 0.703 - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
36. soul2 ENSDARG00000039499 1469 1.558 0.848 - - - - 0.710 - - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
37. PPP1R8 PPP1R8 1897 1.555 - - 0.810 - 0.745 - - - -
38. bub3 ENSDARG00000075883 1333 1.553 0.791 - 0.762 - - - - - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
39. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.553 - - 0.836 - - 0.717 - - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
40. map3k7 ENSDARG00000020469 2845 1.546 0.777 - 0.769 - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
41. inhbb ENSDARG00000040777 2141 1.546 - - 0.800 - 0.746 - - - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
42. znf207a ENSDARG00000015538 2630 1.543 0.764 - - - - - - - 0.779 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
43. pvrl1b 1645 1.533 - - - - - 0.804 - - 0.729 poliovirus receptor-related 1b
44. CARKD 1398 1.531 0.780 - - - - 0.751 - - - carbohydrate kinase domain containing, transcript variant X7
45. arhgap29b ENSDARG00000017748 812 1.53 - - 0.776 - - 0.754 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
46. cldnf ENSDARG00000043133 1006 1.528 0.819 - - - - 0.709 - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
47. sumo3b ENSDARG00000035993 3414 1.524 0.823 - - - - - - - 0.701 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
48. txnrd1 11401 1.523 - - - - - 0.793 0.730 - - thioredoxin reductase 1
49. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.521 0.803 - - - - 0.718 - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
50. ube2f ENSDARG00000025754 1946 1.52 0.771 - - - 0.749 - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
51. arcn1b ENSDARG00000031214 4529 1.519 0.765 - - - - 0.754 - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
52. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 1.516 - - 0.792 - 0.724 - - - - spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
53. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.516 - - - - 0.722 - - - 0.794 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
54. ERO1LB ERO1LB 1433 1.516 0.812 - 0.704 - - - - - -
55. ajuba ENSDARG00000077842 1152 1.515 0.775 - - - - 0.740 - - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
56. ZNF337_25 ZNF337_25 1713 1.513 - - 0.755 - 0.758 - - - -
57. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.513 - - 0.769 - 0.744 - - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
58. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.512 - - 0.809 - - 0.703 - - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
59. seh1l ENSDARG00000004280 2915 1.511 - - 0.790 - 0.721 - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
60. CABZ01034848.1 CABZ01034848.1 9936 1.511 - - 0.777 - 0.734 - - - -
61. polr2gl ENSDARG00000056127 1771 1.509 - - 0.765 - - - - - 0.744 polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
62. zgc:91909 ENSDARG00000021287 1488 1.507 0.791 - - - - 0.716 - - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
63. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 1.507 - - - - - 0.709 0.798 - - glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
64. lama5 ENSDARG00000058543 2782 1.504 - - 0.767 - - 0.737 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
65. vta1 ENSDARG00000013732 6072 1.502 0.752 - - - - 0.750 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
66. nrip1b ENSDARG00000068894 2699 1.502 0.729 - - - - 0.773 - - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
67. uhrf1 ENSDARG00000103409 3282 1.5 - - 0.800 - - - - - 0.700 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
68. C3H16orf58 C3H16orf58 487 1.498 - - 0.765 - - 0.733 - - -
69. ppig ENSDARG00000044431 3427 1.498 - - - - 0.770 0.728 - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
70. nr2f6a ENSDARG00000003607 4779 1.498 - - 0.712 - - - - - 0.786 nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
71. zgc:66475 ENSDARG00000099519 1348 1.497 0.706 - 0.791 - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
72. tom1 ENSDARG00000104581 1457 1.497 0.745 - - - - 0.752 - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
73. phf14 ENSDARG00000061458 492 1.496 0.747 - - - - 0.749 - - - PHD finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-1796]
74. SPIN4_1 SPIN4_1 2562 1.492 - - - - - - 0.751 - 0.741
75. CASK CASK 1750 1.492 - - 0.739 - - - - - 0.753
76. gpcpd1 ENSDARG00000016011 2563 1.492 0.780 - - - - 0.712 - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
77. dbnla ENSDARG00000008170 2129 1.489 - - - - 0.737 0.752 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
78. ralba ENSDARG00000040778 1574 1.486 - - - - - - 0.769 0.717 - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
79. wu:fc34e06 1793 1.486 0.747 - - - - 0.739 - - - wu:fc34e06, transcript variant X10
80. pip5k1ab ENSDARG00000024642 1988 1.485 - - - - - 0.724 - 0.761 - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
81. srp19 ENSDARG00000035699 2624 1.485 0.777 - - - - 0.708 - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
82. cby1 ENSDARG00000077409, ENSDARG00000113018 772 1.483 0.748 - - - - - 0.735 - - chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
83. wu:fj29h11 ENSDARG00000096562 863 1.479 - - - - 0.703 - - - 0.776 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
84. mybl2 mybl2 1341 1.479 0.770 - - - - - - 0.709 -
85. si:dkey-169i5.4 ENSDARG00000077862 511 1.476 0.766 - - - - 0.710 - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
86. dnajc5ga ENSDARG00000041896 1478 1.474 - - - - - 0.745 0.729 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
87. TRIP10 TRIP10 1079 1.472 - - 0.727 - - 0.745 - - -
88. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.472 - - - - - - 0.742 - 0.730 ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
89. gnb4b ENSDARG00000115383 7457 1.471 0.763 - - - - - 0.708 - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
90. bzw1b ENSDARG00000099148 2972 1.471 - - - - - 0.736 - - 0.735 basic leucine zipper and W2 domains 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2881]
91. gdap1l1 ENSDARG00000028628 233 1.47 0.769 - - - - 0.701 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
92. CABZ01087568.1 CABZ01087568.1 1487 1.469 - - - - 0.703 - - - 0.766
93. syncripl ENSDARG00000026723 3889 1.469 0.758 - - - - - - - 0.711 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
94. wdr26b ENSDARG00000006812 2216 1.469 - - 0.766 - - - - - 0.703 WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
95. slc39a9 ENSDARG00000070447 971 1.468 - - - - - - 0.751 - 0.717 solute carrier family 39, member 9 [Source:ZFIN;Acc:ZDB-GENE-060314-3]
96. si:ch211-264e16.1 ENSDARG00000068947 1358 1.467 0.758 - - - - 0.709 - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
97. PLEKHG1 2100 1.466 - - - - 0.705 - - 0.761 - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
98. cdc34b ENSDARG00000012627 3879 1.466 - - - - - 0.710 - - 0.756 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
99. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.463 - - - - 0.738 - - - 0.725 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
100. ap3s2 ENSDARG00000039882 2149 1.462 - - - - - 0.755 0.707 - - adaptor related protein complex 3 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-040718-274]

There are 1594 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA