Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for pspc1

Gene Name Gene ID Reads Annotation
pspc1 ENSDARG00000006621 966 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]










Genes with expression patterns similar to pspc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pspc1 ENSDARG00000006621 966 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
2. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.595 - - - - - 0.921 0.779 - 0.895 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
3. daxx ENSDARG00000000729 734 2.576 - - - - - 0.939 - 0.732 0.905 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
4. si:ch211-113e8.10 ENSDARG00000079631 498 2.384 - 0.783 - - - 0.706 - - 0.895 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
5. cwc25 ENSDARG00000003382 2134 2.37 - - - - - 0.754 - 0.721 0.895 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
6. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.346 - - - - - 0.835 0.752 0.759 - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
7. irx5a ENSDARG00000034043 1694 2.342 - - - 0.722 - 0.741 - - 0.879 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
8. stap2a ENSDARG00000092810 591 2.32 - - - - - 0.846 0.703 0.771 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
9. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 2.303 - - - - - 0.728 0.700 - 0.875 glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
10. trps1 ENSDARG00000104082 918 2.226 - - - - - 0.742 0.741 0.743 - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
11. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.205 - - - - - 0.791 0.714 0.700 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
12. cenpk ENSDARG00000039616 744 1.844 - - - - - 0.941 - - 0.903 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
13. si:ch211-133l11.10 ENSDARG00000005626 381 1.821 - - - - - 0.937 - - 0.884 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
14. CCDC106 CCDC106 1908 1.8 - - - - - - - 0.891 0.909
15. kif18a ENSDARG00000008022 546 1.79 - - - - - 0.920 - - 0.870 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
16. phf10 ENSDARG00000070084 1210 1.77 - - - - - 0.861 - - 0.909 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
17. MAN2A2 ENSDARG00000063101 922 1.766 - - - - - 0.888 - - 0.878 mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
18. caly ENSDARG00000036008 1002 1.764 - - - - - 0.877 - - 0.887 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
19. st8sia5 ENSDARG00000036584 529 1.759 - - - - - 0.853 - - 0.906 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
20. nadl1.2 695 1.743 - - - - - 0.921 - - 0.822 neural adhesion molecule L1.2, transcript variant X1
21. mafg2 mafg2 1041 1.74 - - - - - 0.836 - - 0.904
22. eef2a.1 ENSDARG00000042094 1781 1.737 - - - - - - - 0.834 0.903 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
23. tox4 tox4 1671 1.737 - - - - - 0.857 - - 0.880
24. mex3b ENSDARG00000058369 1867 1.734 - - - - - 0.828 - - 0.906 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
25. wu:fj29h11 ENSDARG00000096562 863 1.732 - - - - - - 0.824 - 0.908 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
26. polr2k ENSDARG00000075616 2047 1.73 - - - - - - - 0.868 0.862 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
27. phc2b_1 ENSDARG00000013224 1316 1.725 - - - - - 0.836 - - 0.889 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
28. her15.2 her15.2 1701 1.724 - - - - - 0.909 - - 0.815
29. thsd7ba ENSDARG00000095022 231 1.724 - - - - - 0.832 - - 0.892 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
30. pknox1.1 ENSDARG00000018765 2149 1.71 - - - - - 0.819 - - 0.891 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
31. espl1 ENSDARG00000075354 818 1.703 - - - - - 0.893 - - 0.810 extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
32. cpsf1 ENSDARG00000034178 2036 1.703 - - - - - 0.835 - - 0.868 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
33. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.701 - - - - - - 0.782 - 0.919 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
34. nfkbiab ENSDARG00000007693 1345 1.697 - 0.817 - - - - - - 0.880 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
35. palm1b ENSDARG00000007818 2128 1.693 - - - - - 0.868 - - 0.825 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
36. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.693 - - - - - - 0.813 - 0.880 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
37. st8sia2 ENSDARG00000018788 2183 1.687 - - - - - 0.753 - - 0.934 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
38. C3H17orf103 C3H17orf103 973 1.686 - 0.836 - - - - - - 0.850
39. sumo3b ENSDARG00000035993 3414 1.675 - - - - - - 0.818 - 0.857 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
40. sh3pxd2aa ENSDARG00000060148 913 1.674 - 0.791 - - - - - - 0.883 SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
41. tmed4 ENSDARG00000024954 3476 1.671 - 0.869 - - - - - 0.802 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
42. fancd2 ENSDARG00000053574 247 1.67 - 0.780 - - - 0.890 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
43. memo1 ENSDARG00000010823 1681 1.663 - - - - - 0.808 - - 0.855 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
44. ube2j2 ENSDARG00000061161 844 1.659 - 0.837 - - - - - - 0.822 ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
45. zgc:109949 ENSDARG00000103413 426 1.657 - - - - - 0.767 - - 0.890 zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
46. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.657 - - - - - 0.761 - - 0.896 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
47. hprt1l ENSDARG00000014866 696 1.653 - - - - - 0.751 - - 0.902 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
48. hiat1b ENSDARG00000043055 757 1.65 - - - - - 0.917 - 0.733 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
49. gng2_1 ENSDARG00000056831 113 1.65 - - - - - 0.946 0.704 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
50. nfyba ENSDARG00000039185 1804 1.649 - - - - - 0.923 0.726 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
51. hsf2 ENSDARG00000053097 1188 1.648 - - - - - - 0.730 0.918 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
52. mier1a ENSDARG00000041072 1690 1.648 - - - - - - - 0.762 0.886 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
53. C5H3orf30 C5H3orf30 63 1.646 - - - - - 0.935 0.711 - -
54. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.646 - - - - - 0.931 0.715 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
55. abi2b ENSDARG00000014875 2259 1.643 - - - - - 0.747 - - 0.896 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
56. cdk13 ENSDARG00000076791 828 1.64 - 0.745 - - - - - - 0.895 cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
57. cd99l2 ENSDARG00000056722 5036 1.64 - - - - - 0.838 - - 0.802 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
58. kif5c ENSDARG00000076027 424 1.638 - - - - - - - 0.735 0.903 kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
59. ppt2 ENSDARG00000104542 888 1.638 - - - - - 0.752 - - 0.886 palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
60. zhx2 zhx2 365 1.637 - - - - - 0.911 - 0.726 -
61. spast ENSDARG00000024933 557 1.635 0.750 - - - - - - - 0.885 spastin [Source:ZFIN;Acc:ZDB-GENE-040426-2331]
62. klhdc10 ENSDARG00000007764 529 1.634 - - - - - 0.767 - - 0.867 kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
63. DACT3_1 DACT3_1 1235 1.628 - - - - - 0.902 0.726 - -
64. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.628 - - - - - - 0.719 - 0.909 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
65. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.627 - - - - - 0.908 - 0.719 - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
66. DTX4 ENSDARG00000076302 2642 1.627 - - - - - 0.908 0.719 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
67. pdlim5a ENSDARG00000101777 357 1.626 - - - - - 0.731 - - 0.895 PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
68. rnf121 ENSDARG00000060282 1809 1.624 - - - - - - - 0.712 0.912 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
69. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 1.622 - - - - - - 0.748 - 0.874 polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
70. ryk ENSDARG00000007231 1611 1.621 - - - - - 0.914 0.707 - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
71. etv1 ENSDARG00000101959 358 1.621 - - - - - - - 0.739 0.882 ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
72. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.621 - 0.769 - - - - - - 0.852 serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
73. CYTH2 ENSDARG00000028800 2349 1.621 - - - - - 0.819 0.802 - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
74. cdan1 ENSDARG00000042261 658 1.619 - - - - - - - 0.719 0.900 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
75. vhl ENSDARG00000070617 663 1.619 - - - - - 0.896 - 0.723 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
76. atl1 ENSDARG00000060481 251 1.618 - - - - - 0.878 0.740 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
77. bmper ENSDARG00000101980 668 1.617 - 0.723 - - - - - - 0.894 BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
78. syncripl ENSDARG00000026723 3889 1.617 - - - - - - 0.752 - 0.865 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
79. ek1 ENSDARG00000020080 742 1.615 - - - - - 0.906 0.709 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
80. ctnnal1 ENSDARG00000018162 747 1.612 - - - - - - - 0.731 0.881 catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
81. si:dkey-156k2.6 si:dkey-156k2.6 848 1.612 - - - - - - 0.717 - 0.895
82. kif15 ENSDARG00000012073 1936 1.611 - - - 0.749 - - - - 0.862 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
83. rusc1 ENSDARG00000078125 617 1.611 - - - - - - 0.721 - 0.890 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
84. tmem8a ENSDARG00000032795 677 1.61 - 0.810 - - - 0.800 - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
85. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.61 - - 0.744 - - - - - 0.866 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
86. ssh2a ENSDARG00000088440 1149 1.608 - - - - - - - 0.796 0.812 slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
87. myo1b ENSDARG00000024694 1761 1.607 - - - - - 0.780 - - 0.827 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
88. RBM12B ENSDARG00000079717 541 1.606 - - - - - 0.714 - - 0.892 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
89. si:ch211-288g17.3 ENSDARG00000070959 2425 1.604 - - - - - - 0.781 - 0.823 si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
90. efna5a ENSDARG00000089790 1007 1.604 - 0.715 - - - - - - 0.889 ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
91. brms1lb ENSDARG00000018047 453 1.603 - - - - - - 0.724 - 0.879 BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
92. RBM6 ENSDARG00000077060 3521 1.601 - - - - - 0.773 - - 0.828 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
93. klhl17 ENSDARG00000037324, ENSDARG00000115666 442 1.601 - - - - - 0.835 0.766 - - kelch-like family member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8131]
94. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.6 - - - - - - 0.717 - 0.883 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
95. xpr1 xpr1 840 1.597 - - - - - 0.789 - - 0.808
96. nrxn2a ENSDARG00000061454 291 1.596 - - - - - 0.844 - 0.752 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
97. syt9a ENSDARG00000003994 298 1.591 - - - - - 0.849 - 0.742 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
98. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.59 - 0.759 - - - 0.831 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
99. CABZ01084569.1 CABZ01084569.1 650 1.59 - - - - - 0.715 - - 0.875
100. notch1b ENSDARG00000052094 7874 1.589 - - - - - 0.887 0.702 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]

There are 2289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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