Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psmg1

Gene Name Gene ID Reads Annotation
psmg1 ENSDARG00000040620 1359 proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]










Genes with expression patterns similar to psmg1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmg1 ENSDARG00000040620 1359 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]
2. cwc25 ENSDARG00000003382 2134 2.434 0.830 - - 0.707 - - - - 0.897 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
3. GANAB_1 GANAB_1 685 1.773 - 0.840 - - - - - - 0.933
4. supt16h ENSDARG00000079949 4755 1.757 0.854 - - - - - - - 0.903 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
5. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.754 0.882 - - - - - - - 0.872 ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
6. DDX47_1 DDX47_1 453 1.743 - 0.807 - - - - - - 0.936
7. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.742 0.819 - - - - - - - 0.923 eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
8. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.727 0.804 - - - - - - - 0.923 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
9. ptprk ENSDARG00000063416 742 1.725 - 0.791 - - - - - - 0.934 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
10. wfdc1 ENSDARG00000058003 850 1.72 0.829 - - - - - - - 0.891 WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
11. nenf ENSDARG00000040192 599 1.718 0.881 - - - - 0.837 - - - neudesin neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-050320-129]
12. CCDC106 CCDC106 1908 1.715 - 0.781 - - - - - - 0.934
13. kifc1 ENSDARG00000001558 6658 1.702 0.779 - - - - - - - 0.923 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
14. nol8 ENSDARG00000044143 425 1.697 - - - - - 0.768 - - 0.929 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
15. fam222a ENSDARG00000090797 566 1.695 - 0.753 - - - - - - 0.942 family with sequence similarity 222, member A [Source:ZFIN;Acc:ZDB-GENE-050309-42]
16. thoc3 ENSDARG00000056517 909 1.692 0.849 0.843 - - - - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
17. nsun2 ENSDARG00000056665 740 1.691 - 0.762 - - - - - - 0.929 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
18. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.686 0.771 - - - - - - - 0.915 RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
19. metrnl 1042 1.676 - 0.800 - - - - - - 0.876 meteorin, glial cell differentiation regulator-like
20. cdan1 ENSDARG00000042261 658 1.669 - - - 0.737 - - - - 0.932 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
21. si:dkey-156k2.6 si:dkey-156k2.6 848 1.667 - 0.737 - - - - - - 0.930
22. triap1 ENSDARG00000014963 646 1.663 - - - - - - - 0.730 0.933 TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
23. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.659 0.775 - - - - - - - 0.884 target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
24. fmnl2b ENSDARG00000075041 1744 1.653 0.857 - - 0.796 - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
25. EIF1B ENSDARG00000029445 5034 1.649 - - - - - - 0.749 - 0.900 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
26. CABZ01057907.1 CABZ01057907.1 1140 1.648 - - - - - - - 0.732 0.916
27. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.648 - 0.736 - - - - - - 0.912 deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
28. rbm42 ENSDARG00000039910 1111 1.647 - 0.738 - - - - - - 0.909 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
29. rxrgb ENSDARG00000004697 332 1.647 - - - - - - - 0.722 0.925 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
30. dmbx1b ENSDARG00000002510 351 1.642 - - - 0.714 - - - - 0.928 diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
31. usp49 ENSDARG00000000229 706 1.641 - - - 0.725 - - - - 0.916 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
32. slc16a8 ENSDARG00000045153 478 1.638 - 0.705 - - - - - - 0.933 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
33. sdad1 ENSDARG00000105117 2819 1.637 - - - 0.745 - - - - 0.892 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
34. als2b ENSDARG00000076924 738 1.635 - - - - - - - 0.716 0.919 amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
35. BX511013.1 ENSDARG00000112403 1018 1.631 - - - 0.753 - - - - 0.878 uncharacterized LOC103908633 [Source:NCBI gene;Acc:103908633]
36. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.628 0.909 - - 0.719 - - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
37. si:rp71-61h23.4 1921 1.626 0.780 - - - - - - - 0.846 si:rp71-61h23.4
38. phf10 ENSDARG00000070084 1210 1.626 - - - 0.720 - - - - 0.906 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
39. galnt10 ENSDARG00000103825 320 1.625 0.814 - - - - 0.811 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
40. rpusd4 ENSDARG00000012674, ENSDARG00000112436 505 1.624 - 0.716 - - - - - - 0.908 RNA pseudouridylate synthase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040801-238]
41. tox4 tox4 1671 1.621 - - - - - - - 0.750 0.871
42. dgcr6 ENSDARG00000005500 479 1.62 0.892 0.728 - - - - - - - DiGeorge syndrome critical region gene 6 [Source:ZFIN;Acc:ZDB-GENE-040912-125]
43. RNASEH2C ENSDARG00000089637 1673 1.611 - - - - - - - 0.738 0.873 ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
44. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 1.608 - 0.709 - - - - - - 0.899 polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
45. rab40c ENSDARG00000061208 1072 1.605 - - - - - - 0.832 0.773 - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
46. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 1.604 0.880 0.724 - - - - - - - adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
47. FRG1 ENSDARG00000056504 1196 1.604 - - - 0.701 - - - - 0.903 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
48. foxa1 ENSDARG00000102138 1797 1.602 - 0.826 - - - - - - 0.776 forkhead box A1 [Source:ZFIN;Acc:ZDB-GENE-990415-78]
49. FBXL3 FBXL3 1769 1.599 - - - 0.732 - - - - 0.867
50. gse1 ENSDARG00000062020 2337 1.593 - 0.764 - - - - - - 0.829 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
51. ttc14 ENSDARG00000013845 1192 1.587 - - - 0.714 - - - - 0.873 tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
52. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.577 0.863 - - - - - - - 0.714 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
53. espl1 ENSDARG00000075354 818 1.573 - 0.779 - - - - - - 0.794 extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
54. lygl1 ENSDARG00000056874 309 1.566 0.839 - - - - 0.727 - - - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
55. slc22a6l ENSDARG00000055523 370 1.562 0.759 0.803 - - - - - - - solute carrier family 22 (organic anion transporter), member 6, like [Source:ZFIN;Acc:ZDB-GENE-040426-2249]
56. brf1a ENSDARG00000017835 206 1.562 0.854 0.708 - - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
57. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.556 0.822 0.734 - - - - - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
58. BX539313.3 ENSDARG00000098016 638 1.555 0.845 - - 0.710 - - - - -
59. ank2b ENSDARG00000043313 3065 1.541 - - - - - - - 0.733 0.808 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
60. dut ENSDARG00000106529 3120 1.54 - - - - - - - 0.777 0.763 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
61. ggnbp2 ENSDARG00000055086 1419 1.54 0.752 - - 0.788 - - - - - gametogenetin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-060929-52]
62. mars ENSDARG00000034396 3618 1.537 - 0.711 - - - - - - 0.826 methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
63. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.535 0.779 - - - - - - 0.756 - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
64. BX085195.1 BX085195.1 995 1.526 - 0.761 - - - - - 0.765 -
65. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.525 0.824 - - - - - 0.701 - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
66. prkag1 ENSDARG00000003818 2800 1.525 0.797 - - 0.728 - - - - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
67. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.51 0.780 0.730 - - - - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
68. slit2 ENSDARG00000004246 5277 1.495 0.700 - - - - - - - 0.795 slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
69. lrrc58b ENSDARG00000063509 1357 1.494 - 0.780 - - - 0.714 - - - leucine rich repeat containing 58b [Source:ZFIN;Acc:ZDB-GENE-050309-29]
70. plagx ENSDARG00000036855 3768 1.491 - - - 0.710 - - - - 0.781 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
71. cox16 ENSDARG00000039136 1066 1.472 - - - 0.731 - - - 0.741 - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
72. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.472 - - - 0.712 - - - - 0.760 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
73. pex11g ENSDARG00000025559 129 1.463 - 0.711 - - - 0.752 - - - peroxisomal biogenesis factor 11 gamma [Source:ZFIN;Acc:ZDB-GENE-050913-79]
74. tubgcp2 ENSDARG00000013079 1520 1.458 - 0.753 - 0.705 - - - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
75. zcchc17 ENSDARG00000018936 1577 1.457 - - - 0.726 - - - 0.731 - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
76. nckap1 ENSDARG00000060853 3540 1.449 0.704 - - - - - - - 0.745 NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
77. bnip3la ENSDARG00000025468 3097 1.435 0.709 - - - - - - - 0.726 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
78. CABZ01085888.1 CABZ01085888.1 868 1.434 - - - 0.721 - - - 0.713 -
79. sf3b4 ENSDARG00000018574 7470 1.42 - 0.710 - 0.710 - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
80. TAF2 ENSDARG00000102307 1401 0.951 - - - - - - - - 0.951 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
81. rab39b rab39b 449 0.946 - - - - - - - - 0.946
82. umps ENSDARG00000012215 4564 0.945 - - - - - - - - 0.945 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
83. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 0.945 - - - - - - - - 0.945 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
84. ifrd1 ENSDARG00000068708 2858 0.944 - - - - - - - - 0.944 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
85. mapk7 ENSDARG00000023110 455 0.943 - - - - - - - - 0.943 mitogen-activated protein kinase 7 [Source:ZFIN;Acc:ZDB-GENE-050320-10]
86. gpr143 ENSDARG00000034572 559 0.943 - - - - - - - - 0.943 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
87. tex10 ENSDARG00000055885 1229 0.942 - - - - - - - - 0.942 testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
88. cenpk ENSDARG00000039616 744 0.942 - - - - - - - - 0.942 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
89. rcbtb1 ENSDARG00000036645 255 0.942 - - - - - - - - 0.942 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
90. olig2 ENSDARG00000040946 1405 0.942 - - - - - - - - 0.942 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
91. NUMA1_2 NUMA1_2 2897 0.94 - - - - - - - - 0.940
92. rab11fip3 ENSDARG00000016490 661 0.939 - - - - - - - - 0.939 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
93. lsm1 ENSDARG00000043177 767 0.939 - - - - - - - - 0.939 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
94. TUBB8P7_2 TUBB8P7_2 565 0.939 - - - - - - - - 0.939
95. ndst2b ENSDARG00000060678 453 0.938 - - - - - - - - 0.938 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
96. PRDM12 PRDM12 133 0.938 - - - - - - - - 0.938
97. CR376785.2 CR376785.2 175 0.938 - - - - - - - - 0.938
98. kif5c ENSDARG00000076027 424 0.938 - - - - - - - - 0.938 kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
99. CR678040.1 CR678040.1 117 0.937 - - - - - - - - 0.937
100. LPL_1 LPL_1 1150 0.937 - - - - - - - - 0.937

There are 1367 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA