Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for psmf1

Gene Name Gene ID Reads Annotation
psmf1 ENSDARG00000022652 527 proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]










Genes with expression patterns similar to psmf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmf1 ENSDARG00000022652 527 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
2. si:ch211-59m15.1 87 2.488 - - - 0.911 - 0.807 0.770 - - si:ch211-59m15.1
3. SV2A ENSDARG00000059945 1278 2.274 - 0.825 - 0.747 - - 0.702 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
4. DIP2C DIP2C 222 1.776 - - - 0.925 - 0.851 - - -
5. CU683901.1 CU683901.1 187 1.764 - - - 0.917 - - 0.847 - -
6. CABZ01029822.1 ENSDARG00000086931 1654 1.758 - - - 0.907 - - 0.851 - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
7. dcp1a ENSDARG00000100136 714 1.75 - 0.859 - 0.891 - - - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
8. eef1a1a ENSDARG00000039502 234 1.74 - - - 0.914 - - 0.826 - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
9. mb21d2a mb21d2a 421 1.737 - - - 0.939 - - 0.798 - -
10. rapgef5a ENSDARG00000075271 282 1.732 - - - 0.912 - 0.820 - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
11. si:ch211-176m18.1 si:ch211-176m18.1 27 1.73 - - - - - 0.863 0.867 - -
12. fam151b ENSDARG00000020024 255 1.724 - 0.811 - 0.913 - - - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
13. FP102801.1_1 FP102801.1_1 238 1.721 - 0.822 - - - - 0.899 - -
14. mus81 ENSDARG00000069326, ENSDARG00000111800 400 1.72 - - - 0.915 - 0.805 - - - MUS81 structure-specific endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2923]
15. nup214 ENSDARG00000016212 163 1.719 - 0.808 - - - - 0.911 - - nucleoporin 214 [Source:ZFIN;Acc:ZDB-GENE-110203-3]
16. rgs20 ENSDARG00000038859 331 1.702 - - - 0.860 - - 0.842 - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
17. DTX3 DTX3 303 1.701 - 0.770 - 0.931 - - - - -
18. trim44 ENSDARG00000051761 509 1.701 - 0.830 - - - - 0.871 - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
19. rp2 ENSDARG00000044339 313 1.699 - - - 0.924 - 0.775 - - - RP2, ARL3 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-040426-2795]
20. orc3 ENSDARG00000008805 444 1.691 - 0.811 - 0.880 - - - - - origin recognition complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6247]
21. slc45a1 ENSDARG00000004302 152 1.689 - - - - - 0.838 0.851 - - solute carrier family 45, member 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2152]
22. hes2.2 ENSDARG00000068168 197 1.68 - - - 0.918 - - 0.762 - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
23. SPTBN4_1 ENSDARG00000092624 473 1.673 - - - 0.922 - - 0.751 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
24. RHOBTB1 ENSDARG00000079468 189 1.672 - 0.805 - - - - 0.867 - - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
25. fabp7b ENSDARG00000034650 397 1.672 - 0.836 - 0.836 - - - - - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
26. si:dkey-219c3.2 ENSDARG00000075805 619 1.66 - - - 0.907 - 0.753 - - - si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
27. taf1b ENSDARG00000028937 879 1.659 - - - 0.916 - 0.743 - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
28. tmem229b ENSDARG00000060569 516 1.656 - - - 0.893 - - 0.763 - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
29. tuba4l ENSDARG00000074289 101 1.651 - 0.749 - 0.902 - - - - - tubulin, alpha 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-5588]
30. ZMAT1 ZMAT1 219 1.65 - - - - - 0.767 0.883 - -
31. meis2b ENSDARG00000077840 5166 1.65 - - - 0.805 - - 0.845 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
32. SNORD18_1 SNORD18_1 5 1.636 - 0.769 - - - - 0.867 - -
33. C2CD3 ENSDARG00000074137 51 1.634 - 0.769 - - - 0.865 - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
34. INA INA 950 1.633 - 0.802 - - - - 0.831 - -
35. SNCAIP ENSDARG00000100198 522 1.633 - - - 0.808 - 0.825 - - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
36. ANK1_1 ANK1_1 507 1.632 - - - 0.885 - - 0.747 - -
37. ndrg4 ENSDARG00000103937 1234 1.631 - - - 0.819 - - 0.812 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
38. LANCL2 ENSDARG00000045465 1221 1.625 - 0.765 - 0.860 - - - - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
39. tmem205 ENSDARG00000100677 101 1.618 - 0.845 - - - 0.773 - - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
40. pdcd10b ENSDARG00000012591 3395 1.611 0.726 - - 0.885 - - - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
41. CABZ01084007.1 CABZ01084007.1 199 1.608 0.752 - - - - 0.856 - - -
42. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.608 - 0.782 - - - - 0.826 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
43. fbxl3b ENSDARG00000021882 58 1.606 - - - - - 0.739 0.867 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
44. cdk5r1b ENSDARG00000045087 2075 1.604 - 0.795 - - - - 0.809 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
45. gtf2a2 ENSDARG00000053685, ENSDARG00000109493, ENSDARG00000113094 515 1.6 - 0.743 - 0.857 - - - - - general transcription factor IIA, 2 [Source:ZFIN;Acc:ZDB-GENE-050522-513]
46. CU104716.1 ENSDARG00000109332 12 1.597 - 0.788 - - - 0.809 - - -
47. tmem51a ENSDARG00000068575, ENSDARG00000114656 596 1.593 0.824 0.769 - - - - - - - transmembrane protein 51a [Source:ZFIN;Acc:ZDB-GENE-061103-481]
48. TMEM151A ENSDARG00000077986 78 1.592 - 0.752 - - - - 0.840 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
49. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.591 - - - 0.733 - - 0.858 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
50. atp6ap1a ENSDARG00000041417 898 1.59 - 0.760 - 0.830 - - - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
51. CABZ01063077.1 CABZ01063077.1 22 1.585 - 0.769 - - - - 0.816 - -
52. dgat1a ENSDARG00000103503 63 1.582 - - - - - 0.820 0.762 - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
53. RPS6KL1 ENSDARG00000079024 22 1.574 - 0.769 - - - - 0.805 - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
54. coq2 ENSDARG00000059510 505 1.567 - 0.791 - 0.776 - - - - - coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-84]
55. cbx6a ENSDARG00000071051 379 1.565 - 0.813 - - - 0.752 - - - chromobox homolog 6a [Source:ZFIN;Acc:ZDB-GENE-040808-26]
56. CR450814.1 ENSDARG00000096835 137 1.562 - 0.757 - - - 0.805 - - -
57. rin1a ENSDARG00000079095 99 1.558 - 0.746 - - - 0.812 - - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
58. C19H7orf41 C19H7orf41 2243 1.556 - - - 0.831 - - 0.725 - -
59. mmp9 ENSDARG00000042816 298 1.554 - 0.820 - - - 0.734 - - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
60. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.552 - 0.721 - - - - 0.831 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
61. nt5c1ba ENSDARG00000018153 31 1.552 - 0.796 - - - - 0.756 - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
62. nbeaa ENSDARG00000070080 862 1.551 - 0.771 - - - - 0.780 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
63. scyl3 ENSDARG00000027046 643 1.55 - - - 0.832 - 0.718 - - - SCY1-like, kinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2559]
64. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.545 - 0.752 - - - - 0.793 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
65. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.544 - 0.736 - - - - 0.808 - -
66. ZBTB41 ENSDARG00000054984 464 1.541 - - - - - 0.810 0.731 - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
67. FJX1 ENSDARG00000035873 22 1.54 - 0.786 - - - 0.754 - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
68. LRCH1 ENSDARG00000078778 407 1.538 - 0.836 - - - 0.702 - - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
69. adam11 ENSDARG00000079204 298 1.533 - 0.779 - - - - 0.754 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
70. hcn2 hcn2 158 1.529 - - - - - 0.724 0.805 - -
71. KIF1A KIF1A 1686 1.525 - 0.820 - - - - 0.705 - -
72. usp54a ENSDARG00000077948, ENSDARG00000112037 406 1.519 - 0.714 - - - 0.805 - - - ubiquitin specific peptidase 54a [Source:ZFIN;Acc:ZDB-GENE-090828-2]
73. pum2 ENSDARG00000061040 207 1.518 - - - - - 0.761 0.757 - - pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]
74. gmcl1 ENSDARG00000020948 261 1.518 - 0.814 - - - - 0.704 - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
75. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 1.514 0.708 - - - - 0.806 - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
76. fmnl2b ENSDARG00000075041 1744 1.512 - - - 0.739 - - 0.773 - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
77. maf1 ENSDARG00000013122 3365 1.51 - 0.748 - 0.762 - - - - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
78. fgf13b ENSDARG00000056633 455 1.507 - 0.778 - - - - 0.729 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
79. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.506 - 0.702 - 0.804 - - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
80. als2b ENSDARG00000076924 738 1.506 - 0.713 - 0.793 - - - - - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
81. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 1.501 - 0.721 - - - - 0.780 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
82. mfap1 ENSDARG00000018241 833 1.498 - - - 0.791 - 0.707 - - - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
83. zic2b ENSDARG00000037178, ENSDARG00000112354 993 1.495 - - - 0.793 - - 0.702 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
84. TMTC2 TMTC2 478 1.494 - 0.771 - - - - 0.723 - -
85. scn4ba ENSDARG00000099031 1634 1.489 - 0.775 - - - - 0.714 - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
86. scamp5 scamp5 797 1.476 - - - 0.704 - - 0.772 - -
87. gsk3ab ENSDARG00000015681 1322 1.476 - 0.722 - 0.754 - - - - - glycogen synthase kinase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-990714-3]
88. ogt.2 1166 1.465 0.760 - - 0.705 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 2, transcript variant X3
89. anapc1 ENSDARG00000075687 488 1.459 - - - 0.757 - 0.702 - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
90. dennd2da ENSDARG00000058666 1780 1.456 0.705 - - 0.751 - - - - - DENN/MADD domain containing 2Da [Source:ZFIN;Acc:ZDB-GENE-061013-542]
91. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 1.452 - - - - - 0.736 0.716 - - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
92. pax6b ENSDARG00000045936 349 1.44 - 0.730 - - - - 0.710 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
93. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.427 - 0.714 - - - - 0.713 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
94. prim1 ENSDARG00000040163 909 1.426 - 0.701 - 0.725 - - - - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
95. BX470149.1 BX470149.1 235 1.41 0.704 0.706 - - - - - - -
96. ccnh ENSDARG00000007657 745 0.933 - - - 0.933 - - - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
97. BX000999.4_1 BX000999.4_1 222 0.93 - - - 0.930 - - - - -
98. rims2a ENSDARG00000101606 1088 0.93 - - - 0.930 - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
99. phf10 ENSDARG00000070084 1210 0.93 - - - 0.930 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
100. GPR180 73 0.929 - - - 0.929 - - - - - G protein-coupled receptor 180, transcript variant X2

There are 1914 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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