Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for psme4b

Gene Name Gene ID Reads Annotation
psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]










Genes with expression patterns similar to psme4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
2. hccs hccs 1758 2.605 - 0.995 0.882 - - 0.728 - - -
3. nnt ENSDARG00000023536 7357 2.483 - - - - - 0.716 0.769 - 0.998 nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
4. MRPL52 ENSDARG00000090568 4402 2.179 - - 0.752 - - - 0.702 - 0.725 mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
5. zgc:55733 ENSDARG00000103845 1550 2.177 - - - - - 0.729 0.714 0.734 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
6. zc3h15 ENSDARG00000015889 3861 1.989 - 0.990 - - - - - - 0.999 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
7. sltm ENSDARG00000052728 6234 1.972 - 0.976 - - - - - - 0.996 SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
8. atp13a atp13a 2867 1.891 - - 0.891 - - - - - 1.000
9. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 1.882 - 0.990 0.892 - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
10. acin1b ENSDARG00000026842 3806 1.875 - - 0.876 - - - - - 0.999 apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
11. mrps33 ENSDARG00000020015 3551 1.858 - - - - - - 0.859 - 0.999 mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
12. cdv3 ENSDARG00000023028 12380 1.851 - 0.977 - - - - 0.874 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
13. CASK CASK 1750 1.837 - 0.991 0.846 - - - - - -
14. tex2 ENSDARG00000078186 2467 1.812 - 0.978 - - - - - 0.834 - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
15. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.809 - 0.960 - - - - 0.849 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
16. klf6a ENSDARG00000029072 3758 1.803 - 0.990 0.813 - - - - - - Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
17. snoU83B snoU83B 4666 1.795 - 0.985 - - - - 0.810 - -
18. trim63 trim63 2437 1.79 - 0.987 - - - - 0.803 - -
19. trpc4apa ENSDARG00000018840 2543 1.772 - 0.978 - 0.794 - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
20. GATAD2B ENSDARG00000005834 3855 1.768 - 0.990 - - - - 0.778 - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
21. FP236813.1 FP236813.1 1842 1.768 - 0.990 0.778 - - - - - -
22. fam135a ENSDARG00000059843 2352 1.767 - - - 0.767 - - - - 1.000 family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
23. sorbs1 ENSDARG00000103435 2297 1.763 - - - 0.763 - - - - 1.000 sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
24. cdc42se1 ENSDARG00000023724 3901 1.762 - 0.976 - 0.786 - - - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
25. acadvl ENSDARG00000016687 5329 1.762 - 0.983 - - - - 0.779 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
26. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 1.76 - 0.993 - - - - 0.767 - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
27. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.756 - 0.984 0.772 - - - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
28. wu:fb12e11 wu:fb12e11 2332 1.752 - 0.993 - - - 0.759 - - -
29. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.749 - 0.953 - - - - 0.796 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
30. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.739 - 0.986 0.753 - - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
31. nmrk2 ENSDARG00000067848 10293 1.731 - - - - - - 0.747 - 0.984 nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
32. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 1.731 - 0.991 - - - 0.740 - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
33. rpl7l1 ENSDARG00000042864 3256 1.724 - 0.974 - - - - - 0.750 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
34. bin1 bin1 3199 1.723 - 0.935 - - - - 0.788 - -
35. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.721 - 0.993 - - - - - 0.728 - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
36. ahr2 ENSDARG00000021833 762 1.72 - 0.989 - 0.731 - - - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
37. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.715 - 0.985 - - - - 0.730 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
38. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.711 - 0.952 - - - - - 0.759 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
39. zgc:101858 ENSDARG00000035129 1393 1.711 - 0.988 - - - 0.723 - - - zgc:101858 [Source:ZFIN;Acc:ZDB-GENE-040927-13]
40. nop16 ENSDARG00000044402 3645 1.709 - 0.982 - - - - - 0.727 - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
41. agfg1b ENSDARG00000019526 472 1.709 - - 0.895 0.814 - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
42. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 1.699 - 0.992 - - - - 0.707 - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
43. eps15l1a ENSDARG00000042670 1565 1.697 0.705 0.992 - - - - - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
44. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.696 - 0.980 - - - - 0.716 - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
45. sh3glb1 sh3glb1 1335 1.686 - 0.983 - - - - - 0.703 -
46. nr2f6a ENSDARG00000003607 4779 1.683 - 0.978 0.705 - - - - - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
47. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.681 - 0.963 - - - - - - 0.718 agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
48. tead3a ENSDARG00000074321 2240 1.676 - - 0.875 - - - 0.801 - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
49. sgcd ENSDARG00000098573 4980 1.676 - 0.946 - - - - 0.730 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
50. pelo ENSDARG00000055477 1927 1.675 - - 0.896 - - - - 0.779 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
51. pmp22b ENSDARG00000060457 20406 1.672 - - - - - - 0.727 - 0.945 peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
52. znf385a ENSDARG00000009899 3433 1.671 - 0.962 0.709 - - - - - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
53. CR942805.1 CR942805.1 94 1.665 - - 0.885 - - - - 0.780 -
54. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.66 - - 0.833 - - - - - 0.827
55. rpl35 ENSDARG00000018334 69583 1.657 - - - - - 0.737 - - 0.920 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
56. CABZ01073174.1 CABZ01073174.1 581 1.655 - - 0.873 - - - - 0.782 -
57. flncb ENSDARG00000018820 5595 1.655 - 0.906 - - - - 0.749 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
58. zgc:194839 ENSDARG00000078550 4003 1.649 - 0.809 0.840 - - - - - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
59. zgc:136439 ENSDARG00000009267 720 1.642 - - 0.889 - - - - 0.753 - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
60. ARHGEF17 ENSDARG00000101644 625 1.637 - - 0.845 0.792 - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
61. rapgef1a ENSDARG00000043593 416 1.636 - - 0.879 0.757 - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
62. abcf1 ENSDARG00000031795 8635 1.631 - 0.882 - - - - 0.749 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
63. fbxo30a ENSDARG00000058561 867 1.62 - - 0.891 0.729 - - - - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
64. cdkn1c cdkn1c 17427 1.617 - 0.905 - - - - 0.712 - -
65. alyref ENSDARG00000077732 25934 1.617 - 0.730 - - - - - - 0.887 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
66. DACT3 DACT3 766 1.616 - - 0.898 0.718 - - - - -
67. rsu1 ENSDARG00000102885 3604 1.613 - - 0.732 - - - 0.881 - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
68. gars ENSDARG00000059070 17015 1.611 - 0.889 - - - - 0.722 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
69. eif3ea ENSDARG00000090697 14670 1.61 - 0.867 - - - - 0.743 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
70. IER2 IER2 604 1.609 - - 0.866 0.743 - - - - -
71. mrps35 ENSDARG00000038456 1514 1.605 - - - - - 0.890 0.715 - - mitochondrial ribosomal protein S35 [Source:ZFIN;Acc:ZDB-GENE-050809-131]
72. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.594 - - 0.826 - - - 0.768 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
73. lrpprc ENSDARG00000043970 3847 1.594 - - - - - - 0.764 0.830 - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
74. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.593 - - 0.872 - - - - 0.721 - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
75. egln1 egln1 3746 1.592 - - 0.839 - - - 0.753 - -
76. inpp4b ENSDARG00000075201 267 1.589 - - 0.873 0.716 - - - - - inositol polyphosphate-4-phosphatase type II B [Source:ZFIN;Acc:ZDB-GENE-090312-97]
77. map3k7 ENSDARG00000020469 2845 1.586 - - 0.884 - - - 0.702 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
78. plcg1 ENSDARG00000038442 5324 1.582 - - 0.854 - - - - 0.728 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
79. mrpl34 ENSDARG00000092954 2052 1.577 - - - - - 0.782 0.795 - - mitochondrial ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-070912-582]
80. zgc:110333 ENSDARG00000040628 3250 1.572 - 0.848 0.724 - - - - - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
81. fam133b ENSDARG00000013863 5070 1.568 - - 0.813 - - 0.755 - - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
82. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.567 - - - - - 0.809 - 0.758 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
83. mdm4 ENSDARG00000057513 1954 1.567 - - 0.834 - - - - 0.733 - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
84. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.567 - - - - - - 0.750 - 0.817 enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
85. fat3a ENSDARG00000033840 902 1.563 - - 0.850 - - - - 0.713 - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
86. usp2a ENSDARG00000020107 2586 1.554 - - 0.847 - - - 0.707 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
87. lrrc40 ENSDARG00000017708 1156 1.552 - - - 0.747 - - - 0.805 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
88. ssbp1 ENSDARG00000039350 809 1.542 - - - - - 0.709 - 0.833 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
89. cct3 ENSDARG00000016173 15869 1.531 - 0.806 - - - - 0.725 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
90. eif2s2 ENSDARG00000053047 15904 1.529 - - - - - 0.709 0.820 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
91. PPP1R8 PPP1R8 1897 1.527 - - 0.812 - - - - 0.715 -
92. sra1 ENSDARG00000053619 2799 1.522 - - 0.785 - - - 0.737 - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
93. PVRL4 1691 1.521 - - 0.805 - - - - 0.716 - poliovirus receptor-related 4
94. naa30 ENSDARG00000079686 814 1.52 - - - 0.718 - - - 0.802 - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
95. cyc1 ENSDARG00000038075 16699 1.518 - - - - - 0.722 0.796 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
96. zgc:66475 ENSDARG00000099519 1348 1.518 - - 0.712 - - - - 0.806 - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
97. ier3ip1 ENSDARG00000039601 5529 1.506 - 0.748 - - - 0.758 - - - immediate early response 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050506-106]
98. mical3a ENSDARG00000021979, ENSDARG00000097017 1790 1.505 - - - - - - 0.743 0.762 - microtubule associated monooxygenase, calponin and LIM domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-050126-2]
99. eif2s1b ENSDARG00000052178 11961 1.502 - 0.736 - - - - 0.766 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
100. acadm ENSDARG00000038900 2319 1.502 - - - - - 0.743 - 0.759 - acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]

There are 1613 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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