Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psme3

Gene Name Gene ID Reads Annotation
psme3 ENSDARG00000012234, ENSDARG00000111284 113 proteasome activator subunit 3 [Source:ZFIN;Acc:ZDB-GENE-991110-19]










Genes with expression patterns similar to psme3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psme3 ENSDARG00000012234, ENSDARG00000111284 113 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome activator subunit 3 [Source:ZFIN;Acc:ZDB-GENE-991110-19]
2. pear1 ENSDARG00000060753 173 1.63 0.749 - - 0.881 - - - - - platelet endothelial aggregation receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091230-1]
3. ctu2 ENSDARG00000051851 68 1.624 0.721 - - - - 0.903 - - - cytosolic thiouridylase subunit 2 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040801-79]
4. C9H2orf76 C9H2orf76 559 1.592 - - - 0.873 0.719 - - - -
5. KCNK3 KCNK3 115 1.584 0.738 - - 0.846 - - - - -
6. ispd ENSDARG00000005034 173 1.582 - 0.710 - 0.872 - - - - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
7. CR848814.2 CR848814.2 19 1.547 0.821 - - - 0.726 - - - -
8. wu:fc17b08 ENSDARG00000094249 427 1.531 0.737 0.794 - - - - - - - wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
9. irx1a ENSDARG00000101831 644 1.443 0.708 0.735 - - - - - - - iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
10. esama ENSDARG00000077039 165 1.435 0.704 - 0.731 - - - - - - endothelial cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-090629-1]
11. tmem223 ENSDARG00000069494 1528 1.433 0.708 0.725 - - - - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
12. si:ch73-389k6.1 ENSDARG00000103186 296 1.409 - - - 0.706 - - 0.703 - - si:ch73-389k6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-408]
13. grm2a ENSDARG00000004150 64 0.97 - - - 0.970 - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
14. BX324003.4 BX324003.4 24 0.969 - - - 0.969 - - - - -
15. si:dkey-93l1.9 13 0.969 - - - 0.969 - - - - - si:dkey-93l1.9
16. NAPB_1 NAPB_1 33 0.969 - - - 0.969 - - - - -
17. trpa1b ENSDARG00000031875 39 0.967 - - - 0.967 - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
18. C24H16orf11 C24H16orf11 32 0.964 - - - 0.964 - - - - -
19. ubox5 ENSDARG00000058563 161 0.963 - - - 0.963 - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
20. klc3 ENSDARG00000055965 116 0.963 - - - 0.963 - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
21. tmem187 ENSDARG00000051989 136 0.96 - - - 0.960 - - - - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
22. fam43b ENSDARG00000070222 92 0.958 - - - 0.958 - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
23. pcdh1gb9 ENSDARG00000088475 71 0.958 - - - 0.958 - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
24. tmem222b ENSDARG00000104097 132 0.957 - - - 0.957 - - - - - transmembrane protein 222b [Source:ZFIN;Acc:ZDB-GENE-090303-4]
25. NRSN2 NRSN2 57 0.956 - - - 0.956 - - - - -
26. phyh ENSDARG00000086740 88 0.956 - - - 0.956 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
27. olfm1a ENSDARG00000018270 107 0.954 - - - 0.954 - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
28. rock2b ENSDARG00000004877, ENSDARG00000096433 135 0.954 - - - 0.954 - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
29. gmcl1 ENSDARG00000020948 261 0.953 - - - 0.953 - - - - - germ cell-less, spermatogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-865]
30. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 0.953 - - - 0.953 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
31. si:dkey-261e22.5 si:dkey-261e22.5 68 0.951 - - - 0.951 - - - - -
32. itprip ENSDARG00000015576 62 0.951 - - - 0.951 - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
33. dnah9l ENSDARG00000062630 268 0.95 - - - 0.950 - - - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
34. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 0.95 - - - 0.950 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
35. klhl22 ENSDARG00000088807 324 0.948 - - - 0.948 - - - - - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
36. xkr8.2 ENSDARG00000076820 51 0.948 - - - 0.948 - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
37. nos1apb ENSDARG00000058701 148 0.947 - - - 0.947 - - - - - nitric oxide synthase 1 (neuronal) adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-100824-1]
38. map3k3 ENSDARG00000060348 1482 0.945 - - - 0.945 - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
39. parp6a ENSDARG00000042703 112 0.944 - - - 0.944 - - - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
40. SPA17 ENSDARG00000069361 141 0.942 - - - 0.942 - - - - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
41. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 0.942 - - - 0.942 - - - - - cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
42. lrrcc1 ENSDARG00000078535 118 0.941 - - - 0.941 - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
43. si:dkey-192g7.3 ENSDARG00000094012 105 0.94 - - - 0.940 - - - - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
44. ids ENSDARG00000071699 265 0.937 - - - 0.937 - - - - - iduronate 2-sulfatase [Source:ZFIN;Acc:ZDB-GENE-061215-37]
45. zgc:111991 zgc:111991 159 0.937 - - - 0.937 - - - - -
46. minal minal 383 0.937 - - - 0.937 - - - - -
47. ARX ARX 71 0.934 - - - 0.934 - - - - -
48. ftsjd1 ftsjd1 137 0.934 - - - 0.934 - - - - -
49. C12H17orf62_1 C12H17orf62_1 83 0.932 - - - 0.932 - - - - -
50. pum2 ENSDARG00000061040 207 0.931 - - - 0.931 - - - - - pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]
51. VSTM2B VSTM2B 149 0.93 - - - 0.930 - - - - -
52. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 0.928 - - - 0.928 - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
53. bhik bhik 23 0.926 0.926 - - - - - - - -
54. zgc:173726 ENSDARG00000077078 250 0.926 - - - 0.926 - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
55. vgf ENSDARG00000105529 247 0.925 - - - 0.925 - - - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
56. zgc:162780 ENSDARG00000069548 340 0.923 - - - 0.923 - - - - - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
57. adhfe1 ENSDARG00000053518 499 0.922 - - - 0.922 - - - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
58. TKT TKT 298 0.921 - - - 0.921 - - - - -
59. ndp ENSDARG00000076569 120 0.921 - - - 0.921 - - - - - Norrie disease (pseudoglioma) [Source:ZFIN;Acc:ZDB-GENE-060216-2]
60. hsp70l_1 ENSDARG00000055723 72 0.92 - - - 0.920 - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
61. srd5a1 ENSDARG00000020509 242 0.92 - - - 0.920 - - - - - steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:ZFIN;Acc:ZDB-GENE-060929-938]
62. SLC27A3 SLC27A3 240 0.919 - - - 0.919 - - - - -
63. si:ch211-139k8.2 143 0.916 - - - 0.916 - - - - - si:ch211-139k8.2, transcript variant X4
64. si:ch211-193k19.2 ENSDARG00000077572 35 0.916 - - - 0.916 - - - - - si:ch211-193k19.2 [Source:ZFIN;Acc:ZDB-GENE-060503-203]
65. CR318603.2 ENSDARG00000105536 199 0.914 0.914 - - - - - - - -
66. CABZ01012080.1 CABZ01012080.1 10 0.913 0.913 - - - - - - - -
67. lrrc48 lrrc48 50 0.913 0.913 - - - - - - - -
68. si:dkey-17e16.17 615 0.913 - - - 0.913 - - - - - si:dkey-17e16.17
69. rft1 ENSDARG00000060398 146 0.913 - - - 0.913 - - - - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
70. fam110b ENSDARG00000088073 420 0.913 - - - 0.913 - - - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
71. sh3d19 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 340 0.913 - - - 0.913 - - - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
72. si:dkey-222f2.1 ENSDARG00000043242 192 0.913 0.913 - - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
73. CABZ01074899.1 CABZ01074899.1 89 0.913 0.913 - - - - - - - -
74. DEPDC7 19 0.913 0.913 - - - - - - - - DEP domain containing 7, transcript variant X1
75. zgc:92590 ENSDARG00000040282 13 0.913 0.913 - - - - - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
76. CCDC23 CCDC23 54 0.913 0.913 - - - - - - - -
77. myo6b ENSDARG00000042141 349 0.912 - - - 0.912 - - - - - myosin VIb [Source:ZFIN;Acc:ZDB-GENE-030318-3]
78. CT573468.1 CT573468.1 283 0.909 - - - 0.909 - - - - -
79. C5H9orf16 C5H9orf16 743 0.909 - - - 0.909 - - - - -
80. mtdhb ENSDARG00000004939 1225 0.908 - - - 0.908 - - - - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
81. zbtb8os ENSDARG00000016368 284 0.908 - - - 0.908 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:ZFIN;Acc:ZDB-GENE-050417-176]
82. ppm1ab ENSDARG00000043250 772 0.907 - - - 0.907 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
83. MAPK8IP1_1 MAPK8IP1_1 186 0.906 - - - 0.906 - - - - -
84. kcnq5b ENSDARG00000069953 107 0.906 - - - 0.906 - - - - - potassium voltage-gated channel, KQT-like subfamily, member 5b [Source:ZFIN;Acc:ZDB-GENE-090312-178]
85. jmjd7 ENSDARG00000035546 222 0.905 - - - 0.905 - - - - - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
86. cbln1 ENSDARG00000057296 165 0.903 - - - 0.903 - - - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
87. C7H11orf68 C7H11orf68 446 0.903 - - - 0.903 - - - - -
88. lypd6 ENSDARG00000004307 233 0.902 - - - 0.902 - - - - - LY6/PLAUR domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-040912-117]
89. helb ENSDARG00000053127 235 0.902 - - - 0.902 - - - - - helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]
90. C8H9orf172 C8H9orf172 113 0.9 - - - 0.900 - - - - -
91. pfdn6 ENSDARG00000037108 2083 0.9 - - - 0.900 - - - - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
92. smap1 ENSDARG00000031302 222 0.899 - - - 0.899 - - - - - small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]
93. ptpn5 ENSDARG00000074866 548 0.898 - - - 0.898 - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
94. ddx20 ENSDARG00000061204 477 0.898 - - - 0.898 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-030131-202]
95. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.897 - - - 0.897 - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
96. cryaa ENSDARG00000053502, ENSDARG00000113469 80 0.892 - - - - 0.892 - - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
97. tnfaip3 ENSDARG00000027777 1066 0.891 - - - 0.891 - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
98. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 0.89 - - - 0.890 - - - - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
99. tpi1a ENSDARG00000025012 562 0.89 - - - 0.890 - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
100. fam26e fam26e 211 0.889 - - - 0.889 - - - - -

There are 659 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA