Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psmd4b

Gene Name Gene ID Reads Annotation
psmd4b ENSDARG00000023279 2002 proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]










Genes with expression patterns similar to psmd4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmd4b ENSDARG00000023279 2002 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
2. chrac1 ENSDARG00000042337 2590 2.517 - - - - - - 0.906 0.809 0.802 chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
3. crebbpa ENSDARG00000104609 1739 2.268 - 0.702 - - - - 0.832 0.734 - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
4. cdk2 ENSDARG00000026577 2835 2.205 - - - 0.739 - 0.741 - - 0.725 cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
5. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 2.198 - 0.762 - - - - 0.725 - 0.711 ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
6. arhgap11a ENSDARG00000100019 1642 1.716 - 0.806 - - - - 0.910 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
7. POLDIP3 ENSDARG00000099375 832 1.664 - 0.788 - - - - 0.876 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]
8. psma2 ENSDARG00000040121 2504 1.661 - 0.898 - - - - 0.763 - - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
9. smg8 ENSDARG00000061378 1164 1.658 - - - - - - 0.865 0.793 - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
10. ssh2b ENSDARG00000098955 614 1.648 - - - - - 0.766 0.882 - - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
11. derl1 ENSDARG00000021905 4698 1.639 - - - - - - 0.813 0.826 - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
12. tnrc6b ENSDARG00000074161 4597 1.635 - - - - - - 0.848 0.787 - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
13. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.634 - 0.802 - - - - - 0.832 - serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
14. C21H5orf15 C21H5orf15 2318 1.634 - 0.715 - - - - 0.919 - -
15. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.61 - 0.770 - - - - 0.840 - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
16. vangl2 ENSDARG00000027397 2418 1.608 - - - - - - 0.800 - 0.808 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
17. ZNF70_2 ZNF70_2 1866 1.602 - 0.893 - - - - 0.709 - -
18. otub1b ENSDARG00000011462 4329 1.598 - - - - - 0.813 0.785 - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
19. tefb ENSDARG00000098103 370 1.593 - - - - - - 0.842 0.751 - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
20. hopx ENSDARG00000089368 2342 1.59 - 0.878 - - - - 0.712 - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
21. scamp3 ENSDARG00000016765 540 1.588 - - - - - 0.757 0.831 - - secretory carrier membrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-33]
22. smu1 smu1 982 1.576 - - - - - - 0.800 0.776 -
23. tmem258 ENSDARG00000078785 9578 1.576 - 0.766 - - - - 0.810 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
24. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.569 - - - - - - 0.793 - 0.776 Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
25. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.568 - 0.854 - - - - - 0.714 - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
26. LIMD2 ENSDARG00000078092 3414 1.568 - - - - - - 0.821 0.747 - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
27. dtymk ENSDARG00000052103 239 1.565 - 0.746 - - - - - 0.819 - deoxythymidylate kinase (thymidylate kinase) [Source:ZFIN;Acc:ZDB-GENE-990603-11]
28. htatip htatip 1553 1.565 - - - - - 0.707 0.858 - -
29. atad5a ENSDARG00000070568 1840 1.564 - - - - - - 0.845 - 0.719 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
30. dram2b ENSDARG00000044241 503 1.562 - - - - - - 0.769 0.793 - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
31. paf1 ENSDARG00000098432 1806 1.562 - - - - - 0.705 0.857 - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
32. CU928070.1 CU928070.1 1152 1.56 - - - - - - 0.824 0.736 -
33. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 1.552 - 0.738 - - - - 0.814 - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
34. si:ch211-215d8.2 ENSDARG00000093233 784 1.552 - - - - - 0.746 0.806 - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
35. coa5 ENSDARG00000094833 1988 1.549 - 0.783 - - - - 0.766 - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
36. stk38a ENSDARG00000019973 1343 1.548 - - - - - - 0.837 0.711 - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
37. dcaf12 ENSDARG00000063155 697 1.547 - - - - - - 0.774 0.773 - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
38. tdp1 ENSDARG00000073866 214 1.546 - - - - - - 0.826 - 0.720 tyrosyl-DNA phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-090909-1]
39. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.543 - 0.749 - - - - 0.794 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
40. ptpn23a ENSDARG00000070124 1206 1.533 - - - - - - 0.789 0.744 - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
41. USO1 ENSDARG00000019581 1617 1.532 - - - - - - 0.753 0.779 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
42. zcchc10 ENSDARG00000091092 1333 1.531 - - - 0.779 - - 0.752 - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
43. prkar1aa ENSDARG00000076128 6565 1.531 - - - - - - 0.785 - 0.746 protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
44. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.531 - - - - - 0.820 0.711 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
45. CR382363.1 ENSDARG00000097381 1637 1.526 - 0.757 - - - - 0.769 - -
46. tmem127 ENSDARG00000030981 1389 1.524 - - - - - - 0.815 - 0.709 transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
47. clic1 ENSDARG00000103340 2235 1.52 - 0.712 - - - - 0.808 - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
48. fah ENSDARG00000101762 274 1.518 - - - - - - 0.796 0.722 - fumarylacetoacetate hydrolase (fumarylacetoacetase) [Source:ZFIN;Acc:ZDB-GENE-030131-1091]
49. ruvbl1 ENSDARG00000002591 2381 1.513 - - - - - - 0.765 0.748 - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
50. zgc:56064 1275 1.509 - - - - - 0.767 - 0.742 - zgc:56064, transcript variant X1
51. MED17 ENSDARG00000006345 779 1.506 - - - - - 0.705 0.801 - - mediator complex subunit 17 [Source:ZFIN;Acc:ZDB-GENE-040302-1]
52. ube4b ENSDARG00000037017 8012 1.505 - - - - - 0.772 - - 0.733 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
53. pitpnaa ENSDARG00000039490 1096 1.504 - 0.735 - - - - 0.769 - - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
54. gemin2 ENSDARG00000015638 886 1.5 - - - - - - 0.711 - 0.789 gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
55. CLDN23 CLDN23 2002 1.498 - 0.766 - - - - 0.732 - -
56. adam10a ENSDARG00000053468 9308 1.495 - 0.774 - - - - 0.721 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
57. dctn5 ENSDARG00000003573 1100 1.495 - - - - - - 0.714 0.781 - dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
58. kctd15a ENSDARG00000045893 1272 1.494 - - - - - - 0.756 - 0.738 potassium channel tetramerization domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-041010-105]
59. rpa3 ENSDARG00000002613 2923 1.491 - - - - - - - 0.707 0.784 replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
60. glmna ENSDARG00000058267 597 1.491 - - - - - - 0.778 0.713 - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
61. BX927351.1 ENSDARG00000096844 125 1.491 - - - - - - 0.766 0.725 -
62. ppm1aa ENSDARG00000032155 1039 1.487 - - - - - - 0.767 0.720 - protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]
63. cisd2 ENSDARG00000052703 2841 1.486 - - - - - - 0.778 0.708 - CDGSH iron sulfur domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1381]
64. GTSE1 ENSDARG00000013719 1115 1.484 - - - 0.726 - 0.758 - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
65. fip1l1b ENSDARG00000070431 1677 1.48 - - - - - - 0.734 - 0.746 FIP1 like 1b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041010-138]
66. prrc1 ENSDARG00000044304 1567 1.48 - - - - - - 0.750 0.730 - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
67. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 1.48 - - - - - - 0.767 - 0.713 secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
68. zer1 ENSDARG00000105123 682 1.479 - - - - - - 0.768 - 0.711 zyg-11 related, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-040426-2307]
69. zfyve27 ENSDARG00000059835 604 1.478 - 0.726 - - - - 0.752 - - zinc finger, FYVE domain containing 27 [Source:ZFIN;Acc:ZDB-GENE-061013-502]
70. ralab ENSDARG00000016253 636 1.477 - 0.767 - - - 0.710 - - - v-ral simian leukemia viral oncogene homolog Ab (ras related) [Source:ZFIN;Acc:ZDB-GENE-041114-195]
71. fanci ENSDARG00000026224 415 1.474 - - - - - - - 0.767 0.707 FA complementation group I [Source:ZFIN;Acc:ZDB-GENE-030131-2905]
72. clasp1a ENSDARG00000010280 1158 1.466 - - - - - 0.724 0.742 - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
73. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.464 - - - - - 0.721 - - 0.743 mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
74. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.461 - 0.759 - - - 0.702 - - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
75. r3hdm1 ENSDARG00000101458 5241 1.46 - - - - - 0.708 0.752 - - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
76. bbip1 ENSDARG00000071046, ENSDARG00000112897, ENSDARG00000116522 1062 1.453 - - - - - 0.737 0.716 - - BBSome interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050208-445]
77. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 1.451 - 0.700 - - - - 0.751 - - calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
78. slc44a1b ENSDARG00000090982 240 1.451 - - - - - - 0.717 0.734 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
79. CECR2 ENSDARG00000078310 903 1.451 - - - - - - 0.738 - 0.713 cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
80. mad2l1 ENSDARG00000004713 3398 1.45 - 0.730 - - - - - - 0.720 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
81. map2k2a ENSDARG00000006609 856 1.449 - 0.701 - - - - - 0.748 - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
82. prkceb ENSDARG00000069928, ENSDARG00000114025 330 1.448 - - - - - - 0.714 0.734 - protein kinase C, epsilon b [Source:ZFIN;Acc:ZDB-GENE-081028-47]
83. vasp vasp 3925 1.438 - 0.727 - - - - 0.711 - -
84. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 1.435 - - - - - 0.735 0.700 - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
85. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.431 0.712 - - - - - - - 0.719 DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
86. prc1b ENSDARG00000005993 780 1.429 - 0.712 - - - - 0.717 - - protein regulator of cytokinesis 1b [Source:ZFIN;Acc:ZDB-GENE-040426-777]
87. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 1.426 - - - - - - 0.720 - 0.706 coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
88. ppp2r1b ppp2r1b 3469 1.41 - 0.700 - - - - 0.710 - -
89. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 0.927 - 0.927 - - - - - - - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
90. phip ENSDARG00000015970 1080 0.913 - - - - - - 0.913 - - pleckstrin homology domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-261]
91. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 0.909 - - - - - - 0.909 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
92. chmp3 ENSDARG00000038064 577 0.907 - - - - - - 0.907 - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
93. sec23ip ENSDARG00000061413 804 0.907 - - - - - - 0.907 - - SEC23 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5259]
94. dennd5a ENSDARG00000017006 3426 0.907 - - - - - - 0.907 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
95. prkacab ENSDARG00000016809 1441 0.906 - - - - - - 0.906 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-040801-208]
96. rsrc2 ENSDARG00000042534 1756 0.906 - 0.906 - - - - - - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
97. WAPAL WAPAL 1888 0.905 - 0.905 - - - - - - -
98. nck1b ENSDARG00000075369 1596 0.904 - - - - - - 0.904 - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
99. si:dkey-17e16.17 615 0.902 - - - - - - 0.902 - - si:dkey-17e16.17
100. aatka ENSDARG00000078222 218 0.902 - - - - - - 0.902 - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]

There are 1383 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA