Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for psmd11a

Gene Name Gene ID Reads Annotation
psmd11a ENSDARG00000060150 4529 proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]










Genes with expression patterns similar to psmd11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmd11a ENSDARG00000060150 4529 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
2. smc1al ENSDARG00000058203 8838 2.172 - - - - - 0.761 0.702 - 0.709 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
3. smarce1 ENSDARG00000016871 9628 1.841 - 0.990 - - - 0.851 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
4. emc3 ENSDARG00000020607 3406 1.82 - 0.994 - - - - 0.826 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
5. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.808 - 0.989 - - - - 0.819 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
6. RBM6 ENSDARG00000077060 3521 1.801 - - 0.985 - - 0.816 - - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
7. ezrb ENSDARG00000025091 2861 1.795 - 0.982 - - - - 0.813 - - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
8. zgc:111974 zgc:111974 1386 1.783 - 0.997 - - - - 0.786 - -
9. setbp1 ENSDARG00000093799 4499 1.77 - 0.997 - - - 0.773 - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
10. suv39h1b ENSDARG00000055753 1540 1.764 - 0.996 - - - - 0.768 - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
11. crabp1b ENSDARG00000035904 2753 1.762 - 0.990 - - - - 0.772 - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
12. gpd1c ENSDARG00000036942 869 1.75 - 0.994 - - - - 0.756 - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
13. esrrga ENSDARG00000004861 805 1.749 - 0.995 - - - - 0.754 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
14. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.745 - 0.994 - - - 0.751 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
15. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.744 - 0.961 - - - - 0.783 - - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
16. atp2b4 5891 1.744 - 0.938 - - - - 0.806 - - ATPase, Ca++ transporting, plasma membrane 4
17. wu:fb54a03 wu:fb54a03 1722 1.738 - 0.996 - - - - 0.742 - -
18. xylt1 ENSDARG00000061248 2357 1.738 - 0.996 - - - 0.742 - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
19. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.733 - - 0.942 - - - 0.791 - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
20. pim1 ENSDARG00000100020 7035 1.731 - 0.988 - - - 0.743 - - - Pim-1 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-061013-139]
21. tes ENSDARG00000051857 2020 1.725 - 0.993 - - - - 0.732 - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
22. tsc22d2 ENSDARG00000041839 1109 1.724 - 0.933 - - - - 0.791 - - TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
23. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.722 - - 0.995 - - - 0.727 - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
24. ube2f ENSDARG00000025754 1946 1.713 - 0.996 - - - - 0.717 - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
25. cdca7a ENSDARG00000077620 9345 1.71 - - 0.983 - - 0.727 - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
26. trnau1apa ENSDARG00000101323 911 1.702 - 0.996 - - - - - 0.706 - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
27. fbxo28 ENSDARG00000027159 9602 1.702 - 0.960 - - - - 0.742 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
28. top2a ENSDARG00000024488 4273 1.699 - 0.984 - - - - - - 0.715 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
29. max ENSDARG00000024844 6035 1.698 - 0.981 - - - - - - 0.717 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
30. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.687 - 0.980 - - - 0.707 - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
31. asna1 ENSDARG00000018190 5253 1.682 - 0.975 - - - 0.707 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
32. u2af2a ENSDARG00000012505 2920 1.665 - - - - - - 0.847 0.818 - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
33. puf60b ENSDARG00000001241 13827 1.658 - - 0.950 - - - - - 0.708 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
34. vangl2 ENSDARG00000027397 2418 1.632 - - - - - 0.770 0.862 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
35. oxsr1a ENSDARG00000034189 4314 1.627 0.801 - - - - 0.826 - - - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
36. rspry1 ENSDARG00000062558 1424 1.603 0.721 - - - - - 0.882 - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
37. zfyve27 ENSDARG00000059835 604 1.595 - - - - - 0.730 0.865 - - zinc finger, FYVE domain containing 27 [Source:ZFIN;Acc:ZDB-GENE-061013-502]
38. psmb3 ENSDARG00000013938 10744 1.584 - 0.829 - - - 0.755 - - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
39. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.572 - - - - - - 0.869 - 0.703 serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
40. st13 ENSDARG00000021973 7787 1.567 - 0.831 - - - - 0.736 - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
41. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.56 - - - - - 0.718 0.842 - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
42. otub1b ENSDARG00000011462 4329 1.557 - - - - - - 0.785 0.772 - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
43. ajuba ENSDARG00000077842 1152 1.551 - - - - - - 0.786 0.765 - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
44. rsrc2 ENSDARG00000042534 1756 1.535 0.779 - - - - - 0.756 - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
45. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.535 - - - - - 0.720 0.815 - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
46. hnrnpab hnrnpab 72354 1.532 - - 0.755 - - 0.777 - - -
47. sumo1 ENSDARG00000044267 4242 1.531 - - - 0.727 - - 0.804 - - small ubiquitin-like modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2186]
48. h2afy2_1 ENSDARG00000087897 9887 1.52 - - - - - 0.734 0.786 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
49. cwc25 ENSDARG00000003382 2134 1.515 - - - - - 0.798 0.717 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
50. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.513 - - - - - 0.713 0.800 - - DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
51. yaf2 ENSDARG00000015966 1905 1.51 - - - - - 0.706 0.804 - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
52. sf1 ENSDARG00000008188 5142 1.507 - - - - - - 0.801 - 0.706 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
53. MAN1A2 ENSDARG00000041728 359 1.499 - - - - - 0.710 0.789 - - mannosidase, alpha, class 1A, member 2 [Source:ZFIN;Acc:ZDB-GENE-070912-390]
54. id1 ENSDARG00000040764 112601 1.497 - 0.776 0.721 - - - - - - inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
55. GSG2 GSG2 1162 1.494 - - - - - 0.731 0.763 - -
56. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 1.491 0.721 - - - - - 0.770 - - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
57. GATAD2B ENSDARG00000005834 3855 1.491 0.700 - - - - 0.791 - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
58. SNRPG ENSDARG00000099667 18697 1.489 - - - - - - 0.720 - 0.769 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
59. cdca8 ENSDARG00000043137 7541 1.486 - 0.712 - - - - 0.774 - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
60. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.486 0.704 - - - - - 0.782 - - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
61. kdm6bb ENSDARG00000056929 4807 1.485 - - - - - 0.738 - - 0.747 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
62. BX296557.2 BX296557.2 1083 1.481 0.721 - - - - - 0.760 - -
63. C8H5orf51 C8H5orf51 1199 1.48 - - - - - 0.773 0.707 - -
64. CREBZF ENSDARG00000089787 4261 1.48 - - - - - 0.769 - - 0.711 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
65. Sep-02 Sep-02 10074 1.48 - - - - - 0.723 0.757 - -
66. gtpbp10 ENSDARG00000040300 533 1.476 0.701 - - - - 0.775 - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
67. nin ENSDARG00000060298 1558 1.471 - - - - - 0.718 0.753 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
68. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 1.469 - - - 0.743 - - - 0.726 - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
69. ppp1cab ENSDARG00000071566 4350 1.465 - - - - - - 0.730 - 0.735 protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
70. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.463 0.756 - - - - - 0.707 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
71. polr2a ENSDARG00000099966 5706 1.462 0.747 - - - - - 0.715 - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
72. rbm25 rbm25 3629 1.462 0.735 - - - - - - 0.727 -
73. fam60al_1 949 1.461 - - - - - - 0.732 0.729 - family with sequence similarity 60, member A, like
74. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.459 - - - - - 0.746 - 0.713 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
75. itgb1b.1 ENSDARG00000053232 4721 1.456 0.736 - - - - - 0.720 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
76. kdm4b ENSDARG00000099675 2037 1.455 - - - - - 0.722 - - 0.733 lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
77. AP3B2 1874 1.451 - - - 0.738 - - - - 0.713 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
78. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.45 0.746 - - - - - - - 0.704 SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
79. elavl1 11672 1.441 0.734 - - - - 0.707 - - - ELAV like RNA binding protein 1, transcript variant X3
80. AL954697.2 AL954697.2 1809 1.439 0.711 - - - - 0.728 - - -
81. dynll2b ENSDARG00000005172 935 1.435 - - - - - 0.710 0.725 - - dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132]
82. bcl11ab ENSDARG00000063153 3032 1.431 - - - - - 0.719 0.712 - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
83. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.429 - - - - - - 0.723 - 0.706 progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
84. mzt2b ENSDARG00000057928 629 1.428 - - - - - 0.708 - - 0.720 mitotic spindle organizing protein 2B [Source:ZFIN;Acc:ZDB-GENE-040801-87]
85. ranbp1 ENSDARG00000014817 3371 1.425 0.716 - - - - - - - 0.709 RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
86. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 1.42 - - - - - 0.718 0.702 - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
87. snrpc ENSDARG00000009871 9567 1.411 - - - - - - - 0.704 0.707 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
88. rad54b ENSDARG00000092134 231 1.406 - - - - - 0.703 0.703 - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
89. CU695232.1 ENSDARG00000098286 1266 0.999 - - 0.999 - - - - - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
90. prkag3b ENSDARG00000000369 1945 0.999 - - 0.999 - - - - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
91. tra2b ENSDARG00000002168 3218 0.999 - 0.999 - - - - - - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
92. ddah2 ENSDARG00000105009 4570 0.999 - - 0.999 - - - - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
93. si:ch211-152p11.4 ENSDARG00000079705 2341 0.999 - - 0.999 - - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
94. igf2bp2a ENSDARG00000003421 2810 0.999 - - 0.999 - - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
95. mknk2b ENSDARG00000015164 2158 0.999 - - 0.999 - - - - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
96. CPAMD8 ENSDARG00000056530 3481 0.999 - - 0.999 - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
97. CT485993.2 CT485993.2 1419 0.999 - - 0.999 - - - - - -
98. C13H10orf11 1209 0.999 - - 0.999 - - - - - - c13h10orf11 homolog (H. sapiens), transcript variant X2
99. mtor ENSDARG00000053196 2156 0.999 - - 0.999 - - - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
100. vapal ENSDARG00000115862 3108 0.999 - - 0.999 - - - - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]

There are 1495 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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