Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psmd1

Gene Name Gene ID Reads Annotation
psmd1 ENSDARG00000003189 4373 proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]










Genes with expression patterns similar to psmd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmd1 ENSDARG00000003189 4373 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
2. pomp ENSDARG00000032296 4439 2.413 - 0.878 - - - 0.734 - - 0.801 proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
3. cdc34b ENSDARG00000012627 3879 2.41 - 0.805 - - - - 0.780 - 0.825 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
4. g3bp1 ENSDARG00000017741 7622 2.291 - 0.827 - - - 0.739 0.725 - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
5. snrnp70 ENSDARG00000077126 5921 2.281 - 0.735 0.749 - - - - - 0.797 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
6. u2af2b ENSDARG00000011740 6946 2.269 - - 0.722 - - - 0.740 - 0.807 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
7. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 2.259 - - - - - 0.708 0.832 - 0.719 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
8. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 2.167 - 0.717 - - - 0.742 - 0.708 - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
9. nucks1a ENSDARG00000078473 28285 1.691 - 0.902 0.789 - - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
10. acsbg2 ENSDARG00000004094 2445 1.676 - 0.793 - - - 0.883 - - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
11. mrpl37 ENSDARG00000062916 1600 1.637 - 0.833 - - - 0.804 - - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
12. ube4b ENSDARG00000037017 8012 1.631 - - - - - 0.899 - - 0.732 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
13. TNPO2 ENSDARG00000042887 2290 1.622 - - - - - - 0.810 - 0.812 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
14. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.607 - - 0.771 - - - - - 0.836 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
15. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.601 - - - - - 0.872 0.729 - - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
16. nr2f6b ENSDARG00000003165 5855 1.594 - 0.820 - - - 0.774 - - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
17. memo1 ENSDARG00000010823 1681 1.589 - 0.818 - - - - - - 0.771 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
18. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.588 - 0.876 - - - 0.712 - - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
19. pigp ENSDARG00000038805 611 1.585 - - - - - 0.790 0.795 - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
20. msl2b ENSDARG00000039430 1003 1.584 - - - - - 0.829 0.755 - - male-specific lethal 2 homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1621]
21. slc20a1b ENSDARG00000010641 2564 1.581 - 0.748 - - - - 0.833 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
22. cdkn2aipnl ENSDARG00000053395 5107 1.57 - 0.867 0.703 - - - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
23. gtf2a1 ENSDARG00000011000 2026 1.569 - 0.701 - - - - 0.868 - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
24. gatad2ab ENSDARG00000006192 2461 1.565 - 0.807 - - - - - - 0.758 GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
25. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.565 - - - - - 0.766 - - 0.799 YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
26. ncl ENSDARG00000002710 16951 1.565 - 0.810 - - - - - 0.755 - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
27. papola ENSDARG00000009585 9567 1.564 - 0.806 0.758 - - - - - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
28. macf1 macf1 1862 1.563 - 0.782 - - - - 0.781 - -
29. srsf6b ENSDARG00000016783 9926 1.56 - - - - 0.705 - - - 0.855 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
30. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.557 - 0.731 - - - 0.826 - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
31. abcf1 ENSDARG00000031795 8635 1.554 - - - - - 0.770 - - 0.784 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
32. mcm5 ENSDARG00000019507 6407 1.553 - 0.810 - - - 0.743 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
33. kdm6bb ENSDARG00000056929 4807 1.552 - 0.725 - - - - 0.827 - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
34. fscn1a ENSDARG00000059680 3999 1.552 - - - - - - 0.793 - 0.759 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
35. ck2a1 ck2a1 3749 1.551 - 0.778 - - - 0.773 - - -
36. znf207a ENSDARG00000015538 2630 1.551 - - - - - 0.741 - - 0.810 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
37. lypla2 ENSDARG00000053656 8971 1.548 - 0.818 - - - - - - 0.730 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
38. Mar-06 Mar-06 953 1.545 - - - - - 0.807 0.738 - -
39. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.543 - 0.802 - - - - - - 0.741 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
40. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.54 - 0.792 - - - - - - 0.748 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
41. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.54 - 0.720 - - - - 0.820 - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
42. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.538 - - 0.770 - - - - - 0.768 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
43. GRAMD4 GRAMD4 1967 1.535 - - - - - 0.787 0.748 - -
44. ubr5 ENSDARG00000018192 9267 1.534 - 0.774 0.760 - - - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
45. CASK CASK 1750 1.531 - - - - - - 0.763 - 0.768
46. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.529 - 0.781 - - - 0.748 - - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
47. wu:fb55g09 6015 1.529 - - - - - 0.767 0.762 - - wu:fb55g09
48. kdm5c ENSDARG00000006124 4389 1.527 - - - - - - 0.747 - 0.780 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
49. hdgfrp2 7462 1.527 - 0.769 - - - - - - 0.758 hepatoma-derived growth factor-related protein 2, transcript variant X1
50. carm1 ENSDARG00000018698 5599 1.523 - 0.768 - - - - - - 0.755 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
51. txnl4a ENSDARG00000036190 2048 1.518 - - - - - - 0.709 - 0.809 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
52. PEG3 PEG3 644 1.518 - - - - - 0.785 0.733 - -
53. dvl3a ENSDARG00000015707 1132 1.516 - - - - - 0.787 0.729 - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
54. tmem167b_1 ENSDARG00000059400 1453 1.515 - 0.765 - - - 0.750 - - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
55. fzr1 fzr1 2984 1.513 - 0.795 - - - 0.718 - - -
56. pebp1 ENSDARG00000042069 6651 1.512 - 0.719 - - - - - - 0.793 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
57. arid4a ENSDARG00000043873 4176 1.51 - - - - - 0.747 - - 0.763 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
58. wdr26b ENSDARG00000006812 2216 1.51 - 0.799 - - - - - - 0.711 WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
59. PAPD5 2090 1.509 - 0.750 - - - 0.759 - - - PAP associated domain containing 5, transcript variant X1
60. eif3s10 ENSDARG00000076815 10822 1.506 - - - - - 0.727 - - 0.779 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
61. ccdc94 1417 1.502 - - - - - 0.777 0.725 - - coiled-coil domain containing 94
62. paip2b ENSDARG00000008706 4255 1.502 - 0.750 - - - 0.752 - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
63. luc7l3 ENSDARG00000014366 4416 1.501 - 0.732 0.769 - - - - - - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
64. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.501 - 0.799 0.702 - - - - - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
65. ssb ENSDARG00000029252 3394 1.501 - 0.723 - - - - - - 0.778 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
66. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.501 - 0.717 - - - 0.784 - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
67. ctnnbip1 ENSDARG00000038954 2519 1.5 - 0.732 - - - - - - 0.768 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
68. PROSER1 ENSDARG00000086302 1935 1.499 - 0.719 - - - - - - 0.780 proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
69. eea1 ENSDARG00000062868 1126 1.496 - 0.722 - - - 0.774 - - - early endosome antigen 1 [Source:ZFIN;Acc:ZDB-GENE-041111-270]
70. slit2 ENSDARG00000004246 5277 1.496 - - - - - - 0.707 - 0.789 slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
71. pip5k1ab ENSDARG00000024642 1988 1.496 - 0.725 - - - - 0.771 - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
72. usp33 ENSDARG00000016163 651 1.493 - - - - - 0.732 0.761 - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
73. cwc22 ENSDARG00000014008 2385 1.492 - - - - - - 0.772 - 0.720 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
74. sox5 ENSDARG00000011582 3632 1.488 - 0.779 - - - - - - 0.709 SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
75. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.486 - 0.765 - - - - 0.721 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
76. si:dkey-19e4.5 ENSDARG00000089886 2562 1.486 - 0.715 - - - - - - 0.771 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
77. setd5 ENSDARG00000078576 1974 1.486 - 0.735 - - - - - - 0.751 SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
78. wu:fj29h11 ENSDARG00000096562 863 1.485 - 0.765 - - - - - - 0.720 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
79. hnrnpm ENSDARG00000061735 19428 1.485 - 0.752 - - - - - - 0.733 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
80. psen1 ENSDARG00000004870 1590 1.484 - - - - - 0.741 - - 0.743 presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
81. pes ENSDARG00000018902 3286 1.484 - 0.779 - - - - - - 0.705 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
82. MRPS12_1 MRPS12_1 2714 1.483 - 0.746 - - - - 0.737 - -
83. ITFG3 ITFG3 1803 1.482 - 0.750 - - - - 0.732 - -
84. rbbp6 ENSDARG00000037919 4813 1.481 - - 0.721 - - - - - 0.760 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
85. mars ENSDARG00000034396 3618 1.475 - 0.740 - - - - - - 0.735 methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
86. supt16h ENSDARG00000079949 4755 1.472 - 0.750 - - - - - - 0.722 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
87. edf1 ENSDARG00000009950 10518 1.468 - 0.755 - - - 0.713 - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
88. dlg3_1 ENSDARG00000076796, ENSDARG00000111101 1542 1.468 - 0.722 - - - 0.746 - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
89. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 1.467 - 0.730 - - - - - 0.737 - dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
90. sarnp ENSDARG00000059357 4768 1.463 - 0.711 - - - - - - 0.752 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
91. CHD1 ENSDARG00000103787 1645 1.462 - - 0.745 - - - - - 0.717 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
92. fh ENSDARG00000075132 1340 1.459 - 0.739 - - - - 0.720 - - fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
93. kpnb3 ENSDARG00000040245 7967 1.458 - 0.717 - - - 0.741 - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
94. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.455 - 0.718 - - - 0.737 - - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
95. mybbp1a ENSDARG00000078214 2458 1.452 - 0.730 - - - - 0.722 - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
96. kifc1 ENSDARG00000001558 6658 1.451 - - - - - - 0.711 - 0.740 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
97. bxdc2 ENSDARG00000098935 1348 1.451 - 0.711 - - - - 0.740 - - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
98. nmt1a ENSDARG00000052966 5918 1.448 - 0.711 - - - 0.737 - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
99. ssbp1 ENSDARG00000039350 809 1.448 - 0.726 - - - - 0.722 - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
100. CORO1C CORO1C 5554 1.446 - 0.727 - - - 0.719 - - -

There are 1387 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA