Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psmc4

Gene Name Gene ID Reads Annotation
psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]










Genes with expression patterns similar to psmc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
2. ppp5c ENSDARG00000034313 8794 2.46 - 0.734 - - - 0.784 - - 0.942 protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
3. eif3g ENSDARG00000016889 10367 2.399 0.705 - - - - 0.741 - - 0.953 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
4. elavl1 11672 2.393 - - 0.767 - - 0.864 - - 0.762 ELAV like RNA binding protein 1, transcript variant X3
5. psmc5 ENSDARG00000015315 8458 2.293 0.766 - - - - 0.712 0.815 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
6. stip1 ENSDARG00000004906 7742 2.276 0.770 - - - - 0.705 0.801 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
7. psmb4 ENSDARG00000054696 8100 2.266 0.727 0.703 - - - - 0.836 - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
8. tdg tdg 3269 2.196 0.727 - - - - 0.701 - - 0.768
9. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 2.146 - 0.711 - - 0.710 0.725 - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
10. ube2i ube2i 13024 1.702 - 0.920 - - - - 0.782 - -
11. schip1 ENSDARG00000035175 3838 1.691 - - - - - 0.802 - - 0.889 schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
12. rbm8a ENSDARG00000016516 8789 1.687 - - - - - - 0.751 - 0.936 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
13. PACS1_1 PACS1_1 1264 1.674 - - - - - 0.736 - - 0.938
14. hk1 ENSDARG00000039452, ENSDARG00000110447, ENSDARG00000112051 5026 1.668 - - - - - - 0.729 - 0.939 hexokinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2848]
15. actr1 ENSDARG00000011611 3879 1.655 - - - - - 0.748 - - 0.907 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
16. ppp4r2b ENSDARG00000053447 2506 1.652 - - - - - 0.752 - - 0.900 protein phosphatase 4, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3008]
17. ZNF337_22 ZNF337_22 322 1.651 0.714 - - - - - - - 0.937
18. cstf3 ENSDARG00000018904 6111 1.644 - - - - - 0.777 - - 0.867 cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
19. vps28 ENSDARG00000103203 4991 1.635 - - - - - - 0.714 - 0.921 vacuolar protein sorting 28 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1527]
20. ENSDARG00000086666 ENSDARG00000086666 2159 1.634 0.746 - - - - - - - 0.888
21. flot2a ENSDARG00000004830 5276 1.634 - - - - - 0.783 - - 0.851 flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
22. kras ENSDARG00000010844 2885 1.633 - - - - - 0.742 - - 0.891 v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
23. pl10 pl10 10795 1.627 - - - - - 0.872 0.755 - -
24. hp1bp3 ENSDARG00000044669 23708 1.627 0.733 - - - - 0.894 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
25. ddx19 ENSDARG00000005699 4602 1.622 - - 0.793 - - 0.829 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
26. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.62 0.764 - - - - - 0.856 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
27. Sep-02 Sep-02 10074 1.616 - - - - - 0.809 0.807 - -
28. capzb ENSDARG00000100252 10444 1.614 - - - - - 0.738 0.876 - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
29. psma2 ENSDARG00000040121 2504 1.608 0.755 - - - - - 0.853 - - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
30. anp32e ENSDARG00000054804 11017 1.608 0.742 - - - - - 0.866 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
31. ccdc47 ENSDARG00000054362 5970 1.608 - - - - - 0.731 0.877 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
32. gps1 ENSDARG00000040650 3893 1.606 - - - - - 0.878 0.728 - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
33. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.604 0.710 0.894 - - - - - - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
34. fmr1 ENSDARG00000037433 5132 1.601 - - - - - - 0.700 - 0.901 fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
35. sema3aa ENSDARG00000019235, ENSDARG00000116240 1745 1.598 - - - - - 0.785 0.813 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa [Source:ZFIN;Acc:ZDB-GENE-991209-3]
36. gstm gstm 4064 1.587 - - - - - - 0.712 - 0.875
37. si:ch211-157c3.4 ENSDARG00000087093 22736 1.584 - 0.838 - - - - - - 0.746 si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
38. CWC15 ENSDARG00000013382 8969 1.582 - - - - - 0.702 - - 0.880 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
39. rpl12 ENSDARG00000006691, ENSDARG00000114004, ENSDARG00000115546 8591 1.581 - - - - - - 0.739 - 0.842 ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]
40. skp1 ENSDARG00000003151 8172 1.579 0.753 - - - - 0.826 - - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
41. hoxa9a ENSDARG00000105013 1509 1.577 - - - - - 0.718 - - 0.859 homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
42. mbnl2 ENSDARG00000018460 3328 1.574 - 0.713 - - - - - - 0.861 muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
43. ilf2 ENSDARG00000014591 14543 1.573 0.838 - 0.735 - - - - - - interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
44. cox6b2 ENSDARG00000037860 33134 1.573 0.801 - - - - - 0.772 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
45. SNRPG ENSDARG00000099667 18697 1.571 - - - - - 0.750 0.821 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
46. caprin1b ENSDARG00000054272 7033 1.569 - - - - - 0.825 0.744 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
47. smarce1 ENSDARG00000016871 9628 1.564 - - - - - 0.854 0.710 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
48. prmt1 ENSDARG00000010246 11311 1.563 0.732 - - - - 0.831 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
49. tmem167a ENSDARG00000035914 3319 1.562 - - - - - - 0.765 - 0.797 transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
50. ppp2r1b ppp2r1b 3469 1.561 - - - - - 0.811 0.750 - -
51. uba1 ENSDARG00000037559 11579 1.558 - - - - - 0.753 0.805 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
52. ube2d3 ENSDARG00000038473 4096 1.557 - - - - - 0.780 - - 0.777 ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
53. tceb1b 14935 1.555 0.767 - - - - - 0.788 - - transcription elongation factor B (SIII), polypeptide 1b
54. sumo3a ENSDARG00000028119 13447 1.555 0.730 - - - - 0.825 - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
55. u2af1 ENSDARG00000015325 3217 1.555 0.728 - - - - 0.827 - - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
56. tdh ENSDARG00000002745 5344 1.553 - - - - - 0.761 0.792 - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
57. ptenb ENSDARG00000056623 5783 1.55 - - - - - 0.794 0.756 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
58. wsb1 ENSDARG00000021343 3828 1.549 - - - - - 0.701 - - 0.848 WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
59. nsd1a ENSDARG00000060016 2974 1.549 - - - - - - 0.720 - 0.829 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
60. rrm1 ENSDARG00000014017 7296 1.548 0.784 - - - - - 0.764 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
61. IM:7163548 IM:7163548 6540 1.548 - - - - - 0.768 0.780 - -
62. cdca7a ENSDARG00000077620 9345 1.547 - - - - - 0.822 - - 0.725 cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
63. rps8a ENSDARG00000055996 2785 1.546 - - - - - - 0.751 - 0.795 ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
64. snrpe ENSDARG00000033175 7462 1.544 0.829 - - - - - 0.715 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
65. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.539 0.725 - - - - - 0.814 - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
66. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 1.538 - - - 0.718 - - 0.820 - - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
67. TNKS TNKS 2775 1.537 - - - - - 0.803 0.734 - -
68. sdprb sdprb 13647 1.537 - 0.700 - - - - - - 0.837
69. smc1al ENSDARG00000058203 8838 1.537 - - - - - 0.817 0.720 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
70. rpl37 ENSDARG00000034291, ENSDARG00000076360 13668 1.536 0.736 - - - - - 0.800 - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
71. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.535 - - - - - 0.739 0.796 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
72. CABZ01028296.1 CABZ01028296.1 6203 1.531 0.748 0.783 - - - - - - -
73. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.531 - - 0.743 - - 0.788 - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
74. h2afy2_1 ENSDARG00000087897 9887 1.53 - - - - - 0.720 0.810 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
75. nob1 ENSDARG00000016080 2483 1.527 - - 0.714 - - 0.813 - - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
76. eif3i ENSDARG00000017445 21149 1.525 0.701 - - - - - 0.824 - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
77. ube2v2 ENSDARG00000028198 23341 1.522 - - - - - 0.703 0.819 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
78. cox6c ENSDARG00000038577 16845 1.521 - - - - - 0.729 0.792 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
79. hnrpl 6412 1.521 - - 0.759 - - - 0.762 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
80. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.52 - - - - - - 0.787 - 0.733 phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
81. drg1 ENSDARG00000039345 7545 1.52 - - - - - 0.712 0.808 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
82. enc1 ENSDARG00000035398 1657 1.517 - - - - - 0.806 0.711 - - ectodermal-neural cortex 1 [Source:ZFIN;Acc:ZDB-GENE-060531-140]
83. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.517 - - - - - 0.701 0.816 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
84. PTP4A3 ENSDARG00000039997 3814 1.515 - - - - - 0.739 0.776 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
85. pa2g4b ENSDARG00000070657 7999 1.515 - - - - - 0.734 0.781 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
86. GABARAP GABARAP 8341 1.515 - - - - - 0.716 0.799 - -
87. CREBZF ENSDARG00000089787 4261 1.512 - - - - - 0.722 0.790 - - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
88. hdac1 ENSDARG00000015427 19804 1.512 0.761 - - - - 0.751 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
89. rpl7l1 ENSDARG00000042864 3256 1.512 0.720 - - - - - 0.792 - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
90. GATAD2B ENSDARG00000005834 3855 1.511 - - - - - 0.761 0.750 - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
91. tfdp2 ENSDARG00000042835 1985 1.506 0.711 - - - - 0.795 - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
92. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.505 0.710 - - - - 0.795 - - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
93. psmc3 ENSDARG00000007141 5592 1.505 - - - - - 0.736 0.769 - - proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
94. zgc:193541 ENSDARG00000092873 21276 1.505 - - - - - 0.729 0.776 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
95. snrpf ENSDARG00000105037 10241 1.504 0.792 - - - - - 0.712 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
96. tmem47 ENSDARG00000057322 4691 1.504 0.737 - - - - 0.767 - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
97. khsrp ENSDARG00000026489 15738 1.502 0.725 - - - - 0.777 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
98. hmgb3a ENSDARG00000056725 15668 1.501 0.765 - - - - 0.736 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
99. slc25a11 ENSDARG00000035741 3377 1.497 - - - - - 0.729 0.768 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
100. vps35 ENSDARG00000008224 13245 1.496 - - - - - 0.781 0.715 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]

There are 1126 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA