Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psmc3ip

Gene Name Gene ID Reads Annotation
psmc3ip ENSDARG00000037892 214 PSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]










Genes with expression patterns similar to psmc3ip

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmc3ip ENSDARG00000037892 214 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]
2. CU207301.4 CU207301.4 192 1.689 - 0.800 - - - 0.889 - - -
3. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1.654 - 0.817 - - - 0.837 - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
4. dph1 ENSDARG00000057973 191 1.651 - - - - - 0.840 0.811 - - diphthamide biosynthesis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-411]
5. CLMP 108 1.578 - - - - - 0.864 0.714 - - CXADR like membrane protein
6. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1.563 - 0.817 - - - - 0.746 - -
7. itga2.1 ENSDARG00000069390 6 1.557 - 0.806 - - - 0.751 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
8. mylk4b ENSDARG00000055412 181 1.557 0.711 0.846 - - - - - - - myosin light chain kinase family, member 4b [Source:ZFIN;Acc:ZDB-GENE-041001-128]
9. zgc:163077 ENSDARG00000101593 60 1.546 - 0.817 - - - - - - 0.729 zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
10. CR759921.2 CR759921.2 583 1.541 - - - - - - 0.756 - 0.785
11. CCSAP CCSAP 147 1.537 - - - - - 0.766 0.771 - -
12. C20H8orf82 C20H8orf82 91 1.534 - - - - - 0.752 - - 0.782
13. CU855815.2 CU855815.2 80 1.523 - - - - - 0.812 - - 0.711
14. rbm27 ENSDARG00000060521 185 1.522 - - 0.783 - - 0.739 - - - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
15. gpr19 ENSDARG00000102226 17 1.513 - - - - - - 0.746 - 0.767 G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
16. alg1 ENSDARG00000054963 334 1.507 - 0.761 - - - - 0.746 - - ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-6093]
17. galnt14 ENSDARG00000023448 102 1.501 - 0.734 - - - - 0.767 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
18. FEZ2_1 FEZ2_1 153 1.498 - 0.756 - - - - 0.742 - -
19. irak1 ENSDARG00000025949 19 1.497 - - - - - 0.751 0.746 - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
20. map2k5 ENSDARG00000011851 287 1.497 - - - - - 0.746 - - 0.751 mitogen-activated protein kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1517]
21. si:ch211-212o2.6 si:ch211-212o2.6 61 1.495 - 0.781 0.714 - - - - - -
22. rapgef5a ENSDARG00000075271 282 1.494 - - 0.710 - - - - - 0.784 Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
23. dlg4 88 1.492 - - - - - - 0.702 - 0.790 discs large MAGUK scaffold protein 4, transcript variant X5
24. pcloa ENSDARG00000063299 353 1.488 - 0.719 - - - - 0.769 - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
25. FAM196A 82 1.488 - - - - - 0.751 0.737 - - family with sequence similarity 196 member A
26. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 1.485 - - - - - 0.719 - - 0.766 si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
27. mettl10 131 1.485 - - - - - 0.732 0.753 - - methyltransferase like 10, transcript variant X1
28. si:dkey-222f8.6 si:dkey-222f8.6 7 1.478 - 0.732 - - - - 0.746 - -
29. NAT14 ENSDARG00000115349 21 1.461 - 0.710 - - - 0.751 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
30. has2 ENSDARG00000036987 349 1.45 0.724 0.726 - - - - - - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
31. 5S_rRNA_22 5S_rRNA_22 45 1.44 - - - - - - 0.739 - 0.701
32. pknox2 ENSDARG00000055349 784 1.416 - - 0.709 - - - 0.707 - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
33. BX908759.1 BX908759.1 52 1 - - - - - 1.000 - - -
34. FAM65C 127 0.964 - 0.964 - - - - - - - family with sequence similarity 65, member C, transcript variant X2
35. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 0.921 - - - - - 0.921 - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
36. mhc1zea ENSDARG00000001470 184 0.919 - - - - - - 0.919 - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
37. tmlhe ENSDARG00000077547 301 0.919 - - - - - - 0.919 - - trimethyllysine hydroxylase, epsilon [Source:ZFIN;Acc:ZDB-GENE-091204-144]
38. noc3l ENSDARG00000002487 230 0.912 - 0.912 - - - - - - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
39. C8H12orf43 C8H12orf43 50 0.903 - - - - - 0.903 - - -
40. mob2b ENSDARG00000012005 395 0.902 - 0.902 - - - - - - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
41. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.897 - - - - - 0.897 - - - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
42. brf1a ENSDARG00000017835 206 0.893 - - - - - 0.893 - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
43. tmtc4 ENSDARG00000020447 873 0.888 - - - - - 0.888 - - - transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
44. dnah5 ENSDARG00000087373 168 0.887 - 0.887 - - - - - - - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
45. si:dkey-100n10.2 101 0.886 - - - - - - 0.886 - - si:dkey-100n10.2
46. tbata ENSDARG00000067831 193 0.885 - - - - - - 0.885 - - thymus, brain and testes associated [Source:ZFIN;Acc:ZDB-GENE-121030-4]
47. homer1b ENSDARG00000101759 341 0.883 - 0.883 - - - - - - - homer scaffold protein 1b [Source:ZFIN;Acc:ZDB-GENE-040801-44]
48. lrp2a ENSDARG00000102506 212 0.878 - - - - - - 0.878 - - low density lipoprotein receptor-related protein 2a [Source:ZFIN;Acc:ZDB-GENE-050119-2]
49. sh3bp2 ENSDARG00000021982 61 0.877 - 0.877 - - - - - - - SH3-domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-268]
50. pde6d ENSDARG00000074892, ENSDARG00000115562, ENSDARG00000115620 506 0.875 - 0.875 - - - - - - - phosphodiesterase 6D, cGMP-specific, rod, delta [Source:ZFIN;Acc:ZDB-GENE-040718-463]
51. C14H5orf45 C14H5orf45 83 0.87 - - - - - 0.870 - - -
52. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 0.869 - - - - - - 0.869 - - LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
53. prkcha ENSDARG00000018382 43 0.866 - - - - - 0.866 - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
54. zgc:152891 ENSDARG00000016789 11 0.866 - - - - - 0.866 - - - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
55. tpi1a ENSDARG00000025012 562 0.865 - - - - - - 0.865 - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
56. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.863 - - - - - 0.863 - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
57. adamts15a ENSDARG00000029124, ENSDARG00000111736 68 0.863 - - - - - 0.863 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 15a [Source:ZFIN;Acc:ZDB-GENE-060526-203]
58. CABZ01078431.1 CABZ01078431.1 183 0.861 - 0.861 - - - - - - -
59. syt5b ENSDARG00000011640 70 0.861 - - - - - - - - 0.861 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
60. wdr92 ENSDARG00000037334 329 0.858 - - - - - - 0.858 - - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
61. pyyb ENSDARG00000035832 18 0.857 - - - - - - 0.857 - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
62. NFATC2 NFATC2 88 0.857 - - - - - 0.857 - - -
63. cldn11a ENSDARG00000020031 284 0.855 - - - - - - - - 0.855 claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
64. CABZ01087514.1 ENSDARG00000090861 245 0.855 - 0.855 - - - - - - - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
65. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 0.853 - - - - - - 0.853 - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
66. tma16 ENSDARG00000008068, ENSDARG00000115226 1169 0.851 - - - - - - 0.851 - - translation machinery associated 16 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-20]
67. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 0.851 - - - - - - 0.851 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
68. C8H1orf194 C8H1orf194 111 0.849 - - - - - - 0.849 - -
69. si:dkey-233e3.1 si:dkey-233e3.1 7 0.847 - - - - - 0.847 - - -
70. r3hcc1 ENSDARG00000099593 188 0.847 - 0.847 - - - - - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
71. tmeff1a ENSDARG00000008191 74 0.846 - - - - - - 0.846 - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
72. C9H3orf38 C9H3orf38 83 0.844 - - - - - 0.844 - - -
73. arhgap15 ENSDARG00000062349 28 0.843 - - - - - 0.843 - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
74. brd1a ENSDARG00000013596, ENSDARG00000116694 547 0.843 - 0.843 - - - - - - - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
75. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.843 - - - - - - - - 0.843 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
76. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 0.841 - - - - - - - - 0.841 protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
77. TTYH1 ENSDARG00000076804 399 0.84 - - - - - - 0.840 - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
78. ripk4 ENSDARG00000043211 775 0.839 - - - - - 0.839 - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
79. GNG12 GNG12 9 0.838 - - - - - 0.838 - - -
80. ift81 ENSDARG00000007444 97 0.838 - - - - - - 0.838 - - intraflagellar transport 81 homolog [Source:ZFIN;Acc:ZDB-GENE-040714-3]
81. BX119916.1 BX119916.1 19 0.838 - - - - - 0.838 - - -
82. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.837 - - - - - - 0.837 - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
83. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.837 - - - - - 0.837 - - -
84. klf4b klf4b 533 0.836 - 0.836 - - - - - - -
85. PSD PSD 367 0.836 - 0.836 - - - - - - -
86. zmym4 ENSDARG00000035823 347 0.835 0.835 - - - - - - - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]
87. WARS ENSDARG00000100954 309 0.832 - 0.832 - - - - - - - tryptophanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1742]
88. ENSDARG00000091766 ENSDARG00000091766 15 0.83 - 0.830 - - - - - - -
89. gas5 279 0.83 - 0.830 - - - - - - - growth arrest-specific 5, transcript variant X4
90. si:rp71-20i5.5 si:rp71-20i5.5 9 0.83 - 0.830 - - - - - - -
91. arhgap19 ENSDARG00000083189 210 0.829 - - - - - - 0.829 - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
92. nme5 ENSDARG00000041617 135 0.826 - - - - - - 0.826 - - NME/NM23 family member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-221]
93. lft1 ENSDARG00000019920 66 0.826 - 0.826 - - - - - - - lefty1 [Source:ZFIN;Acc:ZDB-GENE-990630-10]
94. MTRF1 ENSDARG00000033579 107 0.825 - - - - - - 0.825 - - mitochondrial translational release factor 1 [Source:ZFIN;Acc:ZDB-GENE-050220-8]
95. si:dkey-229d11.3 ENSDARG00000093255 41 0.825 - 0.825 - - - - - - - si:dkey-229d11.3 [Source:ZFIN;Acc:ZDB-GENE-091117-40]
96. fat3a ENSDARG00000033840 902 0.824 - - - - - - 0.824 - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
97. med18 ENSDARG00000041237 247 0.824 - - - - - - 0.824 - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
98. LRFN5_1 LRFN5_1 96 0.823 - - - - - - 0.823 - -
99. fos fos 817 0.823 - - - - - - - - 0.823
100. zgc:113279 ENSDARG00000099533 156 0.822 - 0.822 - - - - - - - zgc:113279 [Source:ZFIN;Acc:ZDB-GENE-050522-529]

There are 1097 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA