Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for psmb3

Gene Name Gene ID Reads Annotation
psmb3 ENSDARG00000013938 10744 proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]










Genes with expression patterns similar to psmb3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. psmb3 ENSDARG00000013938 10744 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
2. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.565 - 0.830 - 0.893 - 0.842 - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
3. marcksl1b ENSDARG00000035715 37390 2.56 - - - - - - 0.991 0.807 0.762 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
4. hp1bp3 ENSDARG00000044669 23708 2.339 - - 0.769 - - 0.772 - 0.798 - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
5. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.315 - - - 0.799 - - - 0.791 0.725 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
6. celf3a ENSDARG00000034668 2432 2.308 - - - 0.874 - 0.702 - - 0.732 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
7. ahsa1l ahsa1l 2366 2.291 0.705 0.834 - - - - - - 0.752
8. lypla2 ENSDARG00000053656 8971 2.26 0.707 - - - - - - 0.786 0.767 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
9. hdac1 ENSDARG00000015427 19804 2.243 0.748 - - 0.784 - 0.711 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
10. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.19 0.749 - 0.703 - - - - - 0.738 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
11. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.77 - - - - - - 0.995 - 0.775 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
12. psmd14 ENSDARG00000063100 15711 1.766 - - 0.770 - - - 0.996 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
13. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.763 - - 0.782 - - - 0.981 - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
14. sipa1l2 ENSDARG00000061640 4545 1.736 - - - - - - 0.997 0.739 - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
15. srsf3b ENSDARG00000059360 14888 1.725 - - - 0.930 - - - - 0.795 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
16. rps11 ENSDARG00000053058 16233 1.717 - - - 0.724 - - 0.993 - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
17. elavl1 11672 1.708 - - - - - 0.709 0.999 - - ELAV like RNA binding protein 1, transcript variant X3
18. psma3 ENSDARG00000086618 6200 1.698 - 0.827 - 0.871 - - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
19. nucks1a ENSDARG00000078473 28285 1.691 - - - - - 0.703 0.988 - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
20. emc3 ENSDARG00000020607 3406 1.674 - 0.834 - 0.840 - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
21. zgc:158409 zgc:158409 21963 1.671 0.831 - - - - 0.840 - - -
22. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.669 - - - 0.812 - 0.857 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
23. kdm6bb ENSDARG00000056929 4807 1.66 - - - 0.835 - 0.825 - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
24. fgfr2 ENSDARG00000058115 6743 1.656 - 0.812 - 0.844 - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
25. sepw2a 8597 1.65 - - - 0.860 - 0.790 - - - selenoprotein W, 2a
26. tes ENSDARG00000051857 2020 1.648 - 0.838 - - - 0.810 - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
27. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.644 - 0.805 - - - 0.839 - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
28. nelfb ENSDARG00000035505 1337 1.63 - - - 0.849 - 0.781 - - - negative elongation factor complex member B [Source:ZFIN;Acc:ZDB-GENE-040426-765]
29. psma8 ENSDARG00000010965 8321 1.626 0.849 - - - - - - 0.777 - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
30. bmpr2a ENSDARG00000011941 2972 1.623 - - - 0.858 - 0.765 - - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
31. nusap1 ENSDARG00000002403 6953 1.621 - - - 0.845 - 0.776 - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
32. gps1 ENSDARG00000040650 3893 1.615 - - - - - 0.812 - - 0.803 G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
33. kif3b ENSDARG00000101120 1158 1.614 - - - 0.827 - 0.787 - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
34. xylt1 ENSDARG00000061248 2357 1.61 - 0.834 - - - 0.776 - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
35. snrnp70 ENSDARG00000077126 5921 1.606 0.782 - - - - 0.824 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
36. sumo3a ENSDARG00000028119 13447 1.601 - - - - - 0.877 - - 0.724 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
37. smarce1 ENSDARG00000016871 9628 1.597 - 0.819 - - - 0.778 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
38. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1.596 - 0.834 - - - 0.762 - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
39. otpa ENSDARG00000014201 2290 1.593 - - - 0.859 - 0.734 - - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
40. arpp19b ENSDARG00000039880 4823 1.592 - - - 0.850 - - - - 0.742 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
41. nmt1a ENSDARG00000052966 5918 1.591 0.760 - - 0.831 - - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
42. CDCA4 ENSDARG00000042319 7918 1.591 - - - - - 0.871 - 0.720 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
43. mcrs1 ENSDARG00000020840 3232 1.59 - - - 0.840 - 0.750 - - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
44. ptmaa ENSDARG00000021113, ENSDARG00000110479 42345 1.589 0.844 - - - - - - 0.745 - prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
45. setbp1 ENSDARG00000093799 4499 1.587 - 0.833 - - - 0.754 - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
46. ppp4r2a ENSDARG00000026540 1782 1.587 - - - - - 0.768 - - 0.819 protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
47. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.586 - - - 0.878 - 0.708 - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
48. pdcd5 ENSDARG00000026072 3135 1.586 - 0.827 - - - 0.759 - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
49. ldha ENSDARG00000101251 10868 1.585 0.758 0.827 - - - - - - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
50. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.584 - 0.835 - - - - - - 0.749 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
51. psmd11a ENSDARG00000060150 4529 1.584 - 0.829 - - - 0.755 - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
52. ubtf ENSDARG00000035066 4070 1.58 - - - - - 0.864 - - 0.716 upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
53. lsm7 ENSDARG00000058328 7191 1.579 0.830 - - - - - - - 0.749 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
54. ubap2 ubap2 4167 1.573 - - - 0.855 - - - - 0.718
55. top2a ENSDARG00000024488 4273 1.573 - 0.819 - - - - - - 0.754 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
56. sf1 ENSDARG00000008188 5142 1.571 - - - - - 0.792 - - 0.779 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
57. hnrnpab hnrnpab 72354 1.566 0.751 - - - - 0.815 - - -
58. phldb1a ENSDARG00000061093 1637 1.565 - 0.833 - - - 0.732 - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
59. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.565 - 0.834 - - - 0.731 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
60. hhatlb ENSDARG00000005139 6674 1.564 - 0.828 - - - - 0.736 - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
61. dyrk1ab ENSDARG00000023814 1769 1.559 - 0.833 - - - - - - 0.726 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
62. PACS1_1 PACS1_1 1264 1.558 - - - 0.836 - 0.722 - - -
63. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 1.554 - 0.840 - - - 0.714 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
64. zc3h14 ENSDARG00000041402, ENSDARG00000109544 2477 1.554 - 0.830 - - - 0.724 - - - zinc finger CCCH-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-041014-257]
65. max ENSDARG00000024844 6035 1.549 - 0.824 0.725 - - - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
66. h2afy2_1 ENSDARG00000087897 9887 1.546 0.745 - - - - 0.801 - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
67. zic4 ENSDARG00000031307 1228 1.546 - - - 0.838 - 0.708 - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
68. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.541 - 0.837 - - - 0.704 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
69. her15.2 her15.2 1701 1.541 0.793 - - - - 0.748 - - -
70. pcif1 ENSDARG00000099084 2851 1.539 - - - - - 0.794 - - 0.745 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
71. myom1a ENSDARG00000061249 10230 1.538 - 0.811 - - - 0.727 - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
72. ube2f ENSDARG00000025754 1946 1.537 0.705 0.832 - - - - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
73. eif3s10 ENSDARG00000076815 10822 1.536 - - - 0.828 - - - - 0.708 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
74. timm8b ENSDARG00000055708 7291 1.534 0.707 - - 0.827 - - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
75. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.532 - - - - - 0.788 - 0.744 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
76. snrpd3l ENSDARG00000076283 7655 1.531 0.754 - - - - - - - 0.777 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
77. pknox1.1 ENSDARG00000018765 2149 1.531 - - - 0.802 - 0.729 - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
78. asna1 ENSDARG00000018190 5253 1.531 - 0.798 - - - 0.733 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
79. tnika ENSDARG00000056218 728 1.528 - - - - - 0.770 - - 0.758 TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
80. IM:7163548 IM:7163548 6540 1.522 - - - - - 0.735 - 0.787 -
81. tcea1 ENSDARG00000003531 2912 1.521 - - - - - 0.746 - - 0.775 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
82. fbxo28 ENSDARG00000027159 9602 1.518 - 0.806 0.712 - - - - - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
83. seta ENSDARG00000031495 39977 1.517 - - - 0.740 - 0.777 - - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
84. hmgb3a ENSDARG00000056725 15668 1.515 - - - 0.769 - 0.746 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
85. zbtb18 ENSDARG00000028228 3653 1.508 - - - - - 0.767 - - 0.741 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
86. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.505 - - - - - 0.751 - - 0.754 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
87. magi1b ENSDARG00000003169 2056 1.503 0.779 - - - - 0.724 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
88. snrpa ENSDARG00000018890 4593 1.501 - - - - - 0.718 - - 0.783 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
89. pak2b ENSDARG00000018476 4331 1.501 - - - - - 0.768 - - 0.733 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
90. TMEM185A TMEM185A 5505 1.5 - - 0.731 - - 0.769 - - -
91. srsf6b ENSDARG00000016783 9926 1.499 - 0.797 - - - 0.702 - - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
92. zgc:123194 zgc:123194 69174 1.499 - 0.744 - 0.755 - - - - -
93. rtn1b ENSDARG00000021143 1682 1.497 - - - - - 0.764 - - 0.733 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
94. st18 663 1.495 - - - - - 0.753 - - 0.742 suppression of tumorigenicity 18, zinc finger
95. mllt11 ENSDARG00000071026 2518 1.495 - - - - - 0.708 - - 0.787 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
96. lpl ENSDARG00000087697 2578 1.491 0.735 - - - - 0.756 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
97. kif22 ENSDARG00000102624 3694 1.488 - - - - - - - 0.769 0.719 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
98. CREBZF ENSDARG00000089787 4261 1.488 - - - - - 0.755 - - 0.733 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
99. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.484 - - - - - 0.777 - - 0.707 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
100. aplp1 ENSDARG00000098368 2317 1.479 - - - - - 0.770 - 0.709 - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]

There are 1518 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA